| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630197
Identifier: 169630197
GI number: 169630197
Start: 3157631
End: 3158356
Strand: Direct
Name: 169630197
Synonym: MAB_3115
Alternate gene names: NA
Gene position: 3157631-3158356 (Clockwise)
Preceding gene: 169630196
Following gene: 169630202
Centisome position: 62.32
GC content: 57.99
Gene sequence:
>726_bases GTGAGCGATCGTACACCGGTGGTCGTCCGAGCACCGGGCGTTGTCTACCAATCCGACTTCGATGAAGCGGTGTTCTTCCA ATGGCTCGACAAGATGCCAGGGGCTTGGTCGCATGGCGGTGCGCGCCAAACGTTACAGGTGGCCGTTGATCCCGATGCTC TCGATGAAGACGCCCTGAGTGAATTCGTCGGGCTCTATCGGCGTTACCACGTAAGCGCCGCAGAGCTCCAGGTCTTGGCT GGCACTCGCCTAGGTTCCTGGTTTAGCTCGCCCGATCGATTCTGGCATCGAGAGATTTTCGAGCGCCCTTCGCCGGCCGA GGATCAGCTGAGCCGCGAACTGTTCTCGGGCGATCTCCCTTGGAACATCGAACCCACCGTTGGCACACGCGTGAACGTCT GGCCGCCTGACATCAATGTGAGCCCCACTCCAGATCATGTGGTCCTCAAGGCCACCGGTGTCCGCTACTATTCCGAGCTC GACGAAGCGGCCTTCTTTGAATGGCTGGATAAAAACCCACAAGTCGAGTCCTACCGTGGTCGCAACCACACTCTCTACAT CAATGTGAATGTCGACAGCGGCGAGGAATGGGAACTGTGCGAACTCGCCGCTCTCTACACCCGATACAACATCGACATGA CAGAACTGCGAGTTCTGAATTCGGGCAACTTCGGACCTTGGTTCAGCGACCCCAAATGGTGGTGGCACAAGGCCGTTTTC GGGTAG
Upstream 100 bases:
>100_bases AGGGGGGCCTGGCCCACGGTGGGCCGCACTGGGACGTCCAGGATCCGAAAACTGGTAAACACGAAAATGTTCCGCCACCA CTTCCCGAAGGAGAAGGTAA
Downstream 100 bases:
>100_bases CCGCTACAAATTCGCGGGCCGCAACACCACGACCGATGTGGTGCGTGATCCCTTGTCCGCCAGCAGCGCGATGACGCGAT CATCGGCATCCACCGCCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MSDRTPVVVRAPGVVYQSDFDEAVFFQWLDKMPGAWSHGGARQTLQVAVDPDALDEDALSEFVGLYRRYHVSAAELQVLA GTRLGSWFSSPDRFWHREIFERPSPAEDQLSRELFSGDLPWNIEPTVGTRVNVWPPDINVSPTPDHVVLKATGVRYYSEL DEAAFFEWLDKNPQVESYRGRNHTLYINVNVDSGEEWELCELAALYTRYNIDMTELRVLNSGNFGPWFSDPKWWWHKAVF G
Sequences:
>Translated_241_residues MSDRTPVVVRAPGVVYQSDFDEAVFFQWLDKMPGAWSHGGARQTLQVAVDPDALDEDALSEFVGLYRRYHVSAAELQVLA GTRLGSWFSSPDRFWHREIFERPSPAEDQLSRELFSGDLPWNIEPTVGTRVNVWPPDINVSPTPDHVVLKATGVRYYSEL DEAAFFEWLDKNPQVESYRGRNHTLYINVNVDSGEEWELCELAALYTRYNIDMTELRVLNSGNFGPWFSDPKWWWHKAVF G >Mature_240_residues SDRTPVVVRAPGVVYQSDFDEAVFFQWLDKMPGAWSHGGARQTLQVAVDPDALDEDALSEFVGLYRRYHVSAAELQVLAG TRLGSWFSSPDRFWHREIFERPSPAEDQLSRELFSGDLPWNIEPTVGTRVNVWPPDINVSPTPDHVVLKATGVRYYSELD EAAFFEWLDKNPQVESYRGRNHTLYINVNVDSGEEWELCELAALYTRYNIDMTELRVLNSGNFGPWFSDPKWWWHKAVFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27746; Mature: 27615
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRTPVVVRAPGVVYQSDFDEAVFFQWLDKMPGAWSHGGARQTLQVAVDPDALDEDALS CCCCCCEEEECCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHH EFVGLYRRYHVSAAELQVLAGTRLGSWFSSPDRFWHREIFERPSPAEDQLSRELFSGDLP HHHHHHHHHCCCHHHEEEECCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC WNIEPTVGTRVNVWPPDINVSPTPDHVVLKATGVRYYSELDEAAFFEWLDKNPQVESYRG CCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHCCC RNHTLYINVNVDSGEEWELCELAALYTRYNIDMTELRVLNSGNFGPWFSDPKWWWHKAVF CCEEEEEEEEECCCCCCHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCCCCHHHHHHHCC G C >Mature Secondary Structure SDRTPVVVRAPGVVYQSDFDEAVFFQWLDKMPGAWSHGGARQTLQVAVDPDALDEDALS CCCCCEEEECCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHH EFVGLYRRYHVSAAELQVLAGTRLGSWFSSPDRFWHREIFERPSPAEDQLSRELFSGDLP HHHHHHHHHCCCHHHEEEECCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC WNIEPTVGTRVNVWPPDINVSPTPDHVVLKATGVRYYSELDEAAFFEWLDKNPQVESYRG CCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHCCC RNHTLYINVNVDSGEEWELCELAALYTRYNIDMTELRVLNSGNFGPWFSDPKWWWHKAVF CCEEEEEEEEECCCCCCHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCCCCHHHHHHHCC G C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA