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The map label for this gene is ycaQ [H]

Identifier: 169630170

GI number: 169630170

Start: 3132453

End: 3133676

Strand: Reverse

Name: ycaQ [H]

Synonym: MAB_3087c

Alternate gene names: 169630170

Gene position: 3133676-3132453 (Counterclockwise)

Preceding gene: 169630171

Following gene: 169630168

Centisome position: 61.84

GC content: 65.93

Gene sequence:

>1224_bases
GTGAGCCGGTCGGCCTTGACCGTGGCCCAGGCGCGGCGCATCGCGATCGCGGCGCAGGGTTTCACAGACACCTCCGCGAC
GGCCGTTACCCGTGCACATCTGCGCAAGCTCATTTCCAGAATTCAGGTACTGCAACTGGATTCGGTATCGGTGGCTGTGC
GTGCGCACTACGCGCCCGTGTTCAGCAGGCTTGGGCCCTATGACCGCGCGCTGCTCGACGACGCCGCGTGGAGCCACAGC
GCGCGCACGCCGCGGCTACTCATCGAATACTGGGCGCACGAAGCGGCCCTGATGTCGATTCAGGATTGGCCGTTGATGCG
CTGGCGTATGCGCGAGTACCGCCATGGGCGGTGGGCGCGAAAGTTCGTCGAGGAGAATCCGGGGCTCGTCGACGAGGTGT
TGGCCGCCGTCGCCGAATTGGGGCCGTGCACGGCCGGGCAGATCGAGGCCTACCTGGAACGTGAGGCGCCAGGACGCAAG
GGCCCATGGTGGGATCGCAGCGAAACCAAGTGGATCGCCGAAGCCCTGTTTTCCTCGGGCGAGCTGACCACCGATAAGCG
GGTCGGCTTTTCGCGGCATTACCAACTGGCGCACAAGGTGATTCCCGCCGAAATCTACCAGCGCGAGGTATCCGACGAGG
AGGCAGTACTGGAGCTGGCCCGCCGTGCGGTCGGTGCGCTGGGGGTGGGGACCGAGGCCGATATCCGTGACTATTTCCGG
CTCTCGGCCGGACAGATCAAACCCGCACTCGCTGTGCTCGCCGACGCGGGCGAGGTCGAGAGAGTGTCCGTCGACGGGTG
GGGTGCACCGGCATATCTGGCTGCCGGACGGACGATTCCGCGAGCCGACCAGGGGACGGCACTGCTGTGCCCCTTTGATC
CGCTGATCTTTTTTCGTCCGCGCGTCGAGCGGCTTTTCGATTTCCACTACCGCATCGAGATCTACACACCCGCGGCCAAA
CGGCAGTACGGCTACTACGTGTGGCCTTTCCTGCTCGATGGGCAACTGGTGGGCAGGGTCGACCTCAAGGCCGATCGCGC
GGCCGGCACGCTCAATGTCGTCGGAGCCTTTGCCGAAGAGGGCCGAGACCCTGTCGGCATCGCCGGACCGCTGGCCGAGC
AACTGGTGAGCATGGCGTCCTGGCTGGGCCTGGAGCGTGTGGCGGTAGGTGAGCGCGGAGACCTGGTCAGGCCCCTGGGC
GCCGTCCTTCGAACGACACCGTGA

Upstream 100 bases:

>100_bases
CCGACCACGGCCTGGGCGGTGTGCCCGGCGTCATCGACAATTCGGGGGAGATGATCGATCCGTCCGACTCCGGCTGGTTG
TCCCGTCTTGTGGGAGCCCG

Downstream 100 bases:

>100_bases
CCGCATCGGCGACCTTCAGCGATCCCATCGCCATGGAGAACGGCTTGATGCCGTATGCCCGCTGCGAGACGTCGGTGCTG
AGACTCAGAGCACCGTCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MSRSALTVAQARRIAIAAQGFTDTSATAVTRAHLRKLISRIQVLQLDSVSVAVRAHYAPVFSRLGPYDRALLDDAAWSHS
ARTPRLLIEYWAHEAALMSIQDWPLMRWRMREYRHGRWARKFVEENPGLVDEVLAAVAELGPCTAGQIEAYLEREAPGRK
GPWWDRSETKWIAEALFSSGELTTDKRVGFSRHYQLAHKVIPAEIYQREVSDEEAVLELARRAVGALGVGTEADIRDYFR
LSAGQIKPALAVLADAGEVERVSVDGWGAPAYLAAGRTIPRADQGTALLCPFDPLIFFRPRVERLFDFHYRIEIYTPAAK
RQYGYYVWPFLLDGQLVGRVDLKADRAAGTLNVVGAFAEEGRDPVGIAGPLAEQLVSMASWLGLERVAVGERGDLVRPLG
AVLRTTP

Sequences:

>Translated_407_residues
MSRSALTVAQARRIAIAAQGFTDTSATAVTRAHLRKLISRIQVLQLDSVSVAVRAHYAPVFSRLGPYDRALLDDAAWSHS
ARTPRLLIEYWAHEAALMSIQDWPLMRWRMREYRHGRWARKFVEENPGLVDEVLAAVAELGPCTAGQIEAYLEREAPGRK
GPWWDRSETKWIAEALFSSGELTTDKRVGFSRHYQLAHKVIPAEIYQREVSDEEAVLELARRAVGALGVGTEADIRDYFR
LSAGQIKPALAVLADAGEVERVSVDGWGAPAYLAAGRTIPRADQGTALLCPFDPLIFFRPRVERLFDFHYRIEIYTPAAK
RQYGYYVWPFLLDGQLVGRVDLKADRAAGTLNVVGAFAEEGRDPVGIAGPLAEQLVSMASWLGLERVAVGERGDLVRPLG
AVLRTTP
>Mature_406_residues
SRSALTVAQARRIAIAAQGFTDTSATAVTRAHLRKLISRIQVLQLDSVSVAVRAHYAPVFSRLGPYDRALLDDAAWSHSA
RTPRLLIEYWAHEAALMSIQDWPLMRWRMREYRHGRWARKFVEENPGLVDEVLAAVAELGPCTAGQIEAYLEREAPGRKG
PWWDRSETKWIAEALFSSGELTTDKRVGFSRHYQLAHKVIPAEIYQREVSDEEAVLELARRAVGALGVGTEADIRDYFRL
SAGQIKPALAVLADAGEVERVSVDGWGAPAYLAAGRTIPRADQGTALLCPFDPLIFFRPRVERLFDFHYRIEIYTPAAKR
QYGYYVWPFLLDGQLVGRVDLKADRAAGTLNVVGAFAEEGRDPVGIAGPLAEQLVSMASWLGLERVAVGERGDLVRPLGA
VLRTTP

Specific function: Unknown

COG id: COG3214

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787145, Length=408, Percent_Identity=34.3137254901961, Blast_Score=196, Evalue=3e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009351 [H]

Pfam domain/function: PF06224 DUF1006 [H]

EC number: NA

Molecular weight: Translated: 45230; Mature: 45099

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRSALTVAQARRIAIAAQGFTDTSATAVTRAHLRKLISRIQVLQLDSVSVAVRAHYAPV
CCCCHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEECCCEEEHHHHHHHH
FSRLGPYDRALLDDAAWSHSARTPRLLIEYWAHEAALMSIQDWPLMRWRMREYRHGRWAR
HHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHCCHHHH
KFVEENPGLVDEVLAAVAELGPCTAGQIEAYLEREAPGRKGPWWDRSETKWIAEALFSSG
HHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCC
ELTTDKRVGFSRHYQLAHKVIPAEIYQREVSDEEAVLELARRAVGALGVGTEADIRDYFR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LSAGQIKPALAVLADAGEVERVSVDGWGAPAYLAAGRTIPRADQGTALLCPFDPLIFFRP
HCCCCCCHHHHHHHCCCCEEEEEECCCCCCHHHHCCCCCCCCCCCCEEEECCCCHHEECH
RVERLFDFHYRIEIYTPAAKRQYGYYVWPFLLDGQLVGRVDLKADRAAGTLNVVGAFAEE
HHHHHHCEEEEEEEECCHHHCCCCEEEEEEEECCEEEEEEECCCCCCCCHHHHHHHHHHC
GRDPVGIAGPLAEQLVSMASWLGLERVAVGERGDLVRPLGAVLRTTP
CCCCCCCCCHHHHHHHHHHHHHCHHHEECCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
SRSALTVAQARRIAIAAQGFTDTSATAVTRAHLRKLISRIQVLQLDSVSVAVRAHYAPV
CCCHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEECCCEEEHHHHHHHH
FSRLGPYDRALLDDAAWSHSARTPRLLIEYWAHEAALMSIQDWPLMRWRMREYRHGRWAR
HHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHCCHHHH
KFVEENPGLVDEVLAAVAELGPCTAGQIEAYLEREAPGRKGPWWDRSETKWIAEALFSSG
HHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCC
ELTTDKRVGFSRHYQLAHKVIPAEIYQREVSDEEAVLELARRAVGALGVGTEADIRDYFR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LSAGQIKPALAVLADAGEVERVSVDGWGAPAYLAAGRTIPRADQGTALLCPFDPLIFFRP
HCCCCCCHHHHHHHCCCCEEEEEECCCCCCHHHHCCCCCCCCCCCCEEEECCCCHHEECH
RVERLFDFHYRIEIYTPAAKRQYGYYVWPFLLDGQLVGRVDLKADRAAGTLNVVGAFAEE
HHHHHHCEEEEEEEECCHHHCCCCEEEEEEEECCEEEEEEECCCCCCCCHHHHHHHHHHC
GRDPVGIAGPLAEQLVSMASWLGLERVAVGERGDLVRPLGAVLRTTP
CCCCCCCCCHHHHHHHHHHHHHCHHHEECCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]