| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630159
Identifier: 169630159
GI number: 169630159
Start: 3123124
End: 3124488
Strand: Direct
Name: 169630159
Synonym: MAB_3076
Alternate gene names: NA
Gene position: 3123124-3124488 (Clockwise)
Preceding gene: 169630156
Following gene: 169630161
Centisome position: 61.63
GC content: 64.47
Gene sequence:
>1365_bases ATGAGTGGCAACGGCGCCCTGCCGACGGTCGGTACCCATCCCCATGACTACTACTGGCGAGCGGGCATGGAACTGCGCCC CGCTCCCAGCCGCCTGCGGTTCGACTCGATGTGGACCCAATCGCGCAGGGACATTCTGGAACCGTGGATGGACTTTCATG AGGTTCCCCGGGAGACGGACCGCACCCGCCTGCTGGCGGATCACCTGTGGCAGGGCGACGAACTGATGGACGCCGTAGTG GACAGGATCCGCAAGATGCCGGCCCGCCAGGGCCGGGCAATGCTCAACCGGGCCCTTGATCACGGCATCGAGTCGATCGA GGATCCGCCCGCCGAATTCGTCGCGTTGTTCGAGCAGCTCGACAATCCGCCGGCGTGGTACGACCCCGACCTCTGGGAGC GCGGCCGACAGCTGTGGAACAACTCCTCGCTGGCCGCCAAGTTCGGCATGGGGTTCGGCGACACCTTCGGCACCTTTGTG GGCGACGAGGTCGCCTACGCAACCGGTGCGACAGGCAGATTCGTCAATGACACCCTGCGCCGCAACCTAGAGACCACCGC ATGGTTTCGCAAGATGACCTACCGCGGTGCGCTGGAGCGCTATGCACAGCCGTTCAAGGACACCGTCCTGGTGCGCCTGA TGCACGCACAAGTGCGCGCCGGACTGCGAAGATCCTGGGGTAACGAACAATTCGCCCACCATGGCAACCCGATCTCCAAC TCGATGATGATGGGTGCGGCGATGACCTTCGGCCTCATTCCGCCACTGATCGATCATCAGCACGGACGCACCCGCACGCA GGCAGATTTACAGGCCGCCGTCATGTATTGGGCGTACATCGCCTACATATTCGGCGTAGCCGAGGAGCTCATTCCCACAT CGGTGTCCGAGGGGATGGAGACGATGGACTACATGGTGGCCTATGCCGGCGGCCCCTCGGAATGGACAGACATCATGATG GGCGCCGCATTCGGCTTCGTGGACAAGGGTTTTGCCGGCCGGGTCGGACGCGCGGTTTTCACCCCAATTCTCGGTGTCGC CGCGTACTACGGCGGCGAGGACCTGGTCCGCGCGCTTGTACGAGCGACTCCCCTGCGAGACGCCCGGCTACAGCCGTGGA CCACGCTCACCGGAATCGCGGTGCACGCCAATGTGACACTGCGACGAGTCGGCGACAAACTGCCGGGCGCTGCGCGCCGT GCTCAACAACGCGATGGCGAACTGTTGTGGTGGTCGGCGATGCTCGTGAACAAGACGCTGGCCAAGCTGGGTGGTATGCA CGACATGTCGTACACCCATCACGACGCGACGGCGGCGACACCGGCAGGCTGCCCGGTGCCGCACGCCCCGCGTGTCAGTG CCTGA
Upstream 100 bases:
>100_bases GCCGAGTGTACGGAGGTCTGGCGCCCGCCGGGGTAAAACCGGCCAGGACAATTGACAATGACTGTTGCCAACATTGTCGA TGCTCGCTAGCCTTTTCTTC
Downstream 100 bases:
>100_bases TTCGTGTCAGTGCCTGATTCGTGTCAGTGCCTAATCCTGGGCGCCCAGCCAGGTCTTACCGGGCGACACCATGAACTGGT TGGTGTAGCTCGCGTAGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 454; Mature: 453
Protein sequence:
>454_residues MSGNGALPTVGTHPHDYYWRAGMELRPAPSRLRFDSMWTQSRRDILEPWMDFHEVPRETDRTRLLADHLWQGDELMDAVV DRIRKMPARQGRAMLNRALDHGIESIEDPPAEFVALFEQLDNPPAWYDPDLWERGRQLWNNSSLAAKFGMGFGDTFGTFV GDEVAYATGATGRFVNDTLRRNLETTAWFRKMTYRGALERYAQPFKDTVLVRLMHAQVRAGLRRSWGNEQFAHHGNPISN SMMMGAAMTFGLIPPLIDHQHGRTRTQADLQAAVMYWAYIAYIFGVAEELIPTSVSEGMETMDYMVAYAGGPSEWTDIMM GAAFGFVDKGFAGRVGRAVFTPILGVAAYYGGEDLVRALVRATPLRDARLQPWTTLTGIAVHANVTLRRVGDKLPGAARR AQQRDGELLWWSAMLVNKTLAKLGGMHDMSYTHHDATAATPAGCPVPHAPRVSA
Sequences:
>Translated_454_residues MSGNGALPTVGTHPHDYYWRAGMELRPAPSRLRFDSMWTQSRRDILEPWMDFHEVPRETDRTRLLADHLWQGDELMDAVV DRIRKMPARQGRAMLNRALDHGIESIEDPPAEFVALFEQLDNPPAWYDPDLWERGRQLWNNSSLAAKFGMGFGDTFGTFV GDEVAYATGATGRFVNDTLRRNLETTAWFRKMTYRGALERYAQPFKDTVLVRLMHAQVRAGLRRSWGNEQFAHHGNPISN SMMMGAAMTFGLIPPLIDHQHGRTRTQADLQAAVMYWAYIAYIFGVAEELIPTSVSEGMETMDYMVAYAGGPSEWTDIMM GAAFGFVDKGFAGRVGRAVFTPILGVAAYYGGEDLVRALVRATPLRDARLQPWTTLTGIAVHANVTLRRVGDKLPGAARR AQQRDGELLWWSAMLVNKTLAKLGGMHDMSYTHHDATAATPAGCPVPHAPRVSA >Mature_453_residues SGNGALPTVGTHPHDYYWRAGMELRPAPSRLRFDSMWTQSRRDILEPWMDFHEVPRETDRTRLLADHLWQGDELMDAVVD RIRKMPARQGRAMLNRALDHGIESIEDPPAEFVALFEQLDNPPAWYDPDLWERGRQLWNNSSLAAKFGMGFGDTFGTFVG DEVAYATGATGRFVNDTLRRNLETTAWFRKMTYRGALERYAQPFKDTVLVRLMHAQVRAGLRRSWGNEQFAHHGNPISNS MMMGAAMTFGLIPPLIDHQHGRTRTQADLQAAVMYWAYIAYIFGVAEELIPTSVSEGMETMDYMVAYAGGPSEWTDIMMG AAFGFVDKGFAGRVGRAVFTPILGVAAYYGGEDLVRALVRATPLRDARLQPWTTLTGIAVHANVTLRRVGDKLPGAARRA QQRDGELLWWSAMLVNKTLAKLGGMHDMSYTHHDATAATPAGCPVPHAPRVSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50798; Mature: 50667
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGNGALPTVGTHPHDYYWRAGMELRPAPSRLRFDSMWTQSRRDILEPWMDFHEVPRETD CCCCCCCCCCCCCCCCHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH RTRLLADHLWQGDELMDAVVDRIRKMPARQGRAMLNRALDHGIESIEDPPAEFVALFEQL HHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH DNPPAWYDPDLWERGRQLWNNSSLAAKFGMGFGDTFGTFVGDEVAYATGATGRFVNDTLR CCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHCCHHHHHCCCCCHHHHHHHH RNLETTAWFRKMTYRGALERYAQPFKDTVLVRLMHAQVRAGLRRSWGNEQFAHHGNPISN HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHH SMMMGAAMTFGLIPPLIDHQHGRTRTQADLQAAVMYWAYIAYIFGVAEELIPTSVSEGME HHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TMDYMVAYAGGPSEWTDIMMGAAFGFVDKGFAGRVGRAVFTPILGVAAYYGGEDLVRALV HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH RATPLRDARLQPWTTLTGIAVHANVTLRRVGDKLPGAARRAQQRDGELLWWSAMLVNKTL HHCCCCCCCCCCCHHHHCEEEECCHHHHHHCCCCCCHHHHHHHCCCCEEEHHHHHHHHHH AKLGGMHDMSYTHHDATAATPAGCPVPHAPRVSA HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SGNGALPTVGTHPHDYYWRAGMELRPAPSRLRFDSMWTQSRRDILEPWMDFHEVPRETD CCCCCCCCCCCCCCCHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH RTRLLADHLWQGDELMDAVVDRIRKMPARQGRAMLNRALDHGIESIEDPPAEFVALFEQL HHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH DNPPAWYDPDLWERGRQLWNNSSLAAKFGMGFGDTFGTFVGDEVAYATGATGRFVNDTLR CCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHCCHHHHHCCCCCHHHHHHHH RNLETTAWFRKMTYRGALERYAQPFKDTVLVRLMHAQVRAGLRRSWGNEQFAHHGNPISN HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHH SMMMGAAMTFGLIPPLIDHQHGRTRTQADLQAAVMYWAYIAYIFGVAEELIPTSVSEGME HHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TMDYMVAYAGGPSEWTDIMMGAAFGFVDKGFAGRVGRAVFTPILGVAAYYGGEDLVRALV HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH RATPLRDARLQPWTTLTGIAVHANVTLRRVGDKLPGAARRAQQRDGELLWWSAMLVNKTL HHCCCCCCCCCCCHHHHCEEEECCHHHHHHCCCCCCHHHHHHHCCCCEEEHHHHHHHHHH AKLGGMHDMSYTHHDATAATPAGCPVPHAPRVSA HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA