| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630156
Identifier: 169630156
GI number: 169630156
Start: 3119157
End: 3119813
Strand: Direct
Name: 169630156
Synonym: MAB_3073
Alternate gene names: NA
Gene position: 3119157-3119813 (Clockwise)
Preceding gene: 169630155
Following gene: 169630159
Centisome position: 61.56
GC content: 64.54
Gene sequence:
>657_bases ATGCCACGACTACGCCAAGTGTCCCGTGCCGAAACCGACGACCGACTTGTCCATCGCATGTACGACCAGATTTTCGGCGA CCGTGACCCGGTCGCCGATCCGGGCACGACGACGGGCACACCAGGTGACTGGTGGACGGTTTTCGCGCTCGTTCCCGATG CGCTGAAGCACTCGGTGCAGGGTTTCGCGTTCTACCGCAGCCCCGACCGCAAGCTCGACCCTGTGCTGCGCGAACTCGGC CAGACCAGGGCGGGATGGGCACGGCGCAGCCAGTTCGTCTTCTCCCAGCACTGCAAGTCCTGCCGCATGGTCGGCATGAC CGAGGAGATGATCGCCGCGATCCCCTCCTGGAGTACCGCCGAGTGCTTCACTGCGGTGCAGCGCGCGGTGCTGGCCTATA CCGACTGCCTGGTCCTCGATGGCGGCCGGGTGCCCGACGGGGTATTCGCCGCGCTGCAGGCTCATCTCTCCGACGAGGAG ATCCTGGAGCTCACCTACATCACCGCCATGTACGAAATGCACGCCGTGATGAGCACGGCGTTGCGCTTGGAATGGGATAA CCGCGAAGAACCGATCGTGGAGATCGCCGCACCCGAGGGTTTCACATCCTTCGACGTGGGTGACGCCATCGCGCTGAGGC GCGACGAAAACGCCTAG
Upstream 100 bases:
>100_bases GACCTGAGCTATGTGAAGCCGAACACCCTCGGCAACACCCGGATGCTCGCACATCTCTCATCTCGGCCTACGTGACGCGG CGGTCAGCAATGATCGAGGC
Downstream 100 bases:
>100_bases AAGTCCTCGGGCACTCCGCCGTCGTCCTCGTCCTCGTCGGCTCCTCCGCCGCCACGTATCGAGGCGAGCACTCCCGCAAG ATCTTCGGGCTTCACCATCA
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MPRLRQVSRAETDDRLVHRMYDQIFGDRDPVADPGTTTGTPGDWWTVFALVPDALKHSVQGFAFYRSPDRKLDPVLRELG QTRAGWARRSQFVFSQHCKSCRMVGMTEEMIAAIPSWSTAECFTAVQRAVLAYTDCLVLDGGRVPDGVFAALQAHLSDEE ILELTYITAMYEMHAVMSTALRLEWDNREEPIVEIAAPEGFTSFDVGDAIALRRDENA
Sequences:
>Translated_218_residues MPRLRQVSRAETDDRLVHRMYDQIFGDRDPVADPGTTTGTPGDWWTVFALVPDALKHSVQGFAFYRSPDRKLDPVLRELG QTRAGWARRSQFVFSQHCKSCRMVGMTEEMIAAIPSWSTAECFTAVQRAVLAYTDCLVLDGGRVPDGVFAALQAHLSDEE ILELTYITAMYEMHAVMSTALRLEWDNREEPIVEIAAPEGFTSFDVGDAIALRRDENA >Mature_217_residues PRLRQVSRAETDDRLVHRMYDQIFGDRDPVADPGTTTGTPGDWWTVFALVPDALKHSVQGFAFYRSPDRKLDPVLRELGQ TRAGWARRSQFVFSQHCKSCRMVGMTEEMIAAIPSWSTAECFTAVQRAVLAYTDCLVLDGGRVPDGVFAALQAHLSDEEI LELTYITAMYEMHAVMSTALRLEWDNREEPIVEIAAPEGFTSFDVGDAIALRRDENA
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24503; Mature: 24372
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLRQVSRAETDDRLVHRMYDQIFGDRDPVADPGTTTGTPGDWWTVFALVPDALKHSVQ CCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH GFAFYRSPDRKLDPVLRELGQTRAGWARRSQFVFSQHCKSCRMVGMTEEMIAAIPSWSTA HEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHH ECFTAVQRAVLAYTDCLVLDGGRVPDGVFAALQAHLSDEEILELTYITAMYEMHAVMSTA HHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH LRLEWDNREEPIVEIAAPEGFTSFDVGDAIALRRDENA HHCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCC >Mature Secondary Structure PRLRQVSRAETDDRLVHRMYDQIFGDRDPVADPGTTTGTPGDWWTVFALVPDALKHSVQ CCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH GFAFYRSPDRKLDPVLRELGQTRAGWARRSQFVFSQHCKSCRMVGMTEEMIAAIPSWSTA HEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHH ECFTAVQRAVLAYTDCLVLDGGRVPDGVFAALQAHLSDEEILELTYITAMYEMHAVMSTA HHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH LRLEWDNREEPIVEIAAPEGFTSFDVGDAIALRRDENA HHCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA