| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630113
Identifier: 169630113
GI number: 169630113
Start: 3081897
End: 3082946
Strand: Reverse
Name: 169630113
Synonym: MAB_3030c
Alternate gene names: NA
Gene position: 3082946-3081897 (Counterclockwise)
Preceding gene: 169630114
Following gene: 169630109
Centisome position: 60.84
GC content: 67.24
Gene sequence:
>1050_bases ATGACATCACTGATTCCCGGGCCTGCGGGTCGCCCGGATTTTCGCCTGGACCGGCCCTCGGCCTTGATCGCAGCACTTCC GGCAATGCTGGGATTCATTCCCGAGGATTCCCTCGTGGTGGTTACGCTCGCCGACGGACTGATCGAGGCGGTGCTGCGCA GGGATCTGCGTGACCTGGACAACCCTGAACACGCGGCATTCGAAGCGCTGGCCGCCGTGCTCGGGCCCGGGCCGGCCGAT GCGGTGATTGCCGTGGTCATCAGTCCCGTCCTCGATGAGCTGGAGGCCGGGGACATCATTCGGCGACTGGCAAAACATCT TGAGTACCATGGCGTTTCGTTGATCGCCGGCCATGTGGTGGACAGGGTTGGAGCGCATGGATGGTGGCGATGCTACGACG GATGCGGGGCGGGCGGGCCCGTCGACGATCCGCAGTGCTCACCGCTGACCGCGGCCGCGGTATTGGCAGGCAGGACGGTG CACCGGCGCCGGGAAGACTTGGTGGCGTTGATCGCGCCGACCGACACGACCCGCACCGCGGCCCTGGCAGTCTCATTGCG CCGCCCCTTTCAAGGGCCGTGCGACACGGCCGCCGCAGACCGGCGTGCCGTGAATCGCGTGATGCGGACGGCATGCCGGG CGGCCGAGTTTCGGCCGCTGTCGAACCGCGAGATACTTGCGATAGCTCGTTCTCTGATGGCGCTGCGTGTGCGAGACACC CTGTGCGCGTTGGCGGTCGGTGCACTGGCCGCGGATGTCGAGCGGCTCTGGTTGGCGCTGAGCAGGCTGCTGCCCCCGCC CTGGCGGGCCGAAGCGCTGGTGCTGCTGGGTTTCAGCGCTTATGTGCGTGGTGATGGCCCGCTGGCGGGTGTTGCCCTGG ATGCCGCGCTTATGGCGCAGGCGGATCACCGTCTGGGGCAGTTATTGATGTCCGCGCTGCTTTCCGGGATGCGGCCCGAC GAGATCGGTACCTTGGCCGACACCGGTTACCGGATCGCTCACGAGCTGGGAATCAGCCTGCCACCCAGACAGATCCGGCG CGCGGGCTAG
Upstream 100 bases:
>100_bases TTGTCCACAATTACGATCGCGTCCACAGCTCGCCGGGCGACGTCCGTATCGCCAGGCCGCCGCCGGGCCGGATGACGGTC ACCGCTGTCACTGTGCGGGC
Downstream 100 bases:
>100_bases ACCTTCTCCACCATCACGGCGTGAGCCATCTCGTGGGGCAGCTCGACGCTCTCGTGCCCGGGGATGATGATGATGACGCC ATCGGGGGAGGACTCCACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MTSLIPGPAGRPDFRLDRPSALIAALPAMLGFIPEDSLVVVTLADGLIEAVLRRDLRDLDNPEHAAFEALAAVLGPGPAD AVIAVVISPVLDELEAGDIIRRLAKHLEYHGVSLIAGHVVDRVGAHGWWRCYDGCGAGGPVDDPQCSPLTAAAVLAGRTV HRRREDLVALIAPTDTTRTAALAVSLRRPFQGPCDTAAADRRAVNRVMRTACRAAEFRPLSNREILAIARSLMALRVRDT LCALAVGALAADVERLWLALSRLLPPPWRAEALVLLGFSAYVRGDGPLAGVALDAALMAQADHRLGQLLMSALLSGMRPD EIGTLADTGYRIAHELGISLPPRQIRRAG
Sequences:
>Translated_349_residues MTSLIPGPAGRPDFRLDRPSALIAALPAMLGFIPEDSLVVVTLADGLIEAVLRRDLRDLDNPEHAAFEALAAVLGPGPAD AVIAVVISPVLDELEAGDIIRRLAKHLEYHGVSLIAGHVVDRVGAHGWWRCYDGCGAGGPVDDPQCSPLTAAAVLAGRTV HRRREDLVALIAPTDTTRTAALAVSLRRPFQGPCDTAAADRRAVNRVMRTACRAAEFRPLSNREILAIARSLMALRVRDT LCALAVGALAADVERLWLALSRLLPPPWRAEALVLLGFSAYVRGDGPLAGVALDAALMAQADHRLGQLLMSALLSGMRPD EIGTLADTGYRIAHELGISLPPRQIRRAG >Mature_348_residues TSLIPGPAGRPDFRLDRPSALIAALPAMLGFIPEDSLVVVTLADGLIEAVLRRDLRDLDNPEHAAFEALAAVLGPGPADA VIAVVISPVLDELEAGDIIRRLAKHLEYHGVSLIAGHVVDRVGAHGWWRCYDGCGAGGPVDDPQCSPLTAAAVLAGRTVH RRREDLVALIAPTDTTRTAALAVSLRRPFQGPCDTAAADRRAVNRVMRTACRAAEFRPLSNREILAIARSLMALRVRDTL CALAVGALAADVERLWLALSRLLPPPWRAEALVLLGFSAYVRGDGPLAGVALDAALMAQADHRLGQLLMSALLSGMRPDE IGTLADTGYRIAHELGISLPPRQIRRAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37139; Mature: 37007
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLIPGPAGRPDFRLDRPSALIAALPAMLGFIPEDSLVVVTLADGLIEAVLRRDLRDLD CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHCC NPEHAAFEALAAVLGPGPADAVIAVVISPVLDELEAGDIIRRLAKHLEYHGVSLIAGHVV CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH DRVGAHGWWRCYDGCGAGGPVDDPQCSPLTAAAVLAGRTVHRRREDLVALIAPTDTTRTA HHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCEEEEEECCCCCHHH ALAVSLRRPFQGPCDTAAADRRAVNRVMRTACRAAEFRPLSNREILAIARSLMALRVRDT HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH LCALAVGALAADVERLWLALSRLLPPPWRAEALVLLGFSAYVRGDGPLAGVALDAALMAQ HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHCCCCCCCHHHHHHHHHHHH ADHRLGQLLMSALLSGMRPDEIGTLADTGYRIAHELGISLPPRQIRRAG HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCC >Mature Secondary Structure TSLIPGPAGRPDFRLDRPSALIAALPAMLGFIPEDSLVVVTLADGLIEAVLRRDLRDLD CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHCC NPEHAAFEALAAVLGPGPADAVIAVVISPVLDELEAGDIIRRLAKHLEYHGVSLIAGHVV CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH DRVGAHGWWRCYDGCGAGGPVDDPQCSPLTAAAVLAGRTVHRRREDLVALIAPTDTTRTA HHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCEEEEEECCCCCHHH ALAVSLRRPFQGPCDTAAADRRAVNRVMRTACRAAEFRPLSNREILAIARSLMALRVRDT HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH LCALAVGALAADVERLWLALSRLLPPPWRAEALVLLGFSAYVRGDGPLAGVALDAALMAQ HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHCCCCCCCHHHHHHHHHHHH ADHRLGQLLMSALLSGMRPDEIGTLADTGYRIAHELGISLPPRQIRRAG HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA