| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630105
Identifier: 169630105
GI number: 169630105
Start: 3076596
End: 3077492
Strand: Reverse
Name: 169630105
Synonym: MAB_3022c
Alternate gene names: NA
Gene position: 3077492-3076596 (Counterclockwise)
Preceding gene: 169630106
Following gene: 169630104
Centisome position: 60.73
GC content: 64.99
Gene sequence:
>897_bases GTGGCCTCTTCAAATCACCCGCTTGAGACCGTGCTGGCCGACGAGCCCGTGGTCGGCGCCTGCTGGCGCCCCGAGCTTGC TGCGATGTTCAACCAGGGCGCCGTCACCGACGATTCGCTCAACCTCGCCTTCACCGAGATCGTCGCCGAGAACTTCCGTC CCGGAGAGCTACCCGCCGAACTGACGCGCCTGCGTGAGGCGGGCACCGTAGTGGTGCCGCACGGCGTGTCCTTGGGGCTT GCCGGGGCAGATCTGCCGGACGCCAAGCGCGTCAAGCATCTGGCCGCCCTGGCCGCCGAGCTGAACGCGCCGATGGTCAG CGAGCACGTGGCCTTCGTGCGGGCGGGTTTCGAGAACGGGCGGCACAGCGGTGTGCTCGAGGCCGGACACCTACTGGCCC CGCCACGCACCACGCTGGCTCTCGATGTGCTGGTGGACAATGTGTCACGGGTTCAAGACGATCTCGGTGTGCCGTTGGCG CTGGAAAATGTGGCCACCACTTTGCAATGGCCCGAAAATGAGCTCAGCGAGGCCGATTACCTGCGTGAACTTTCGCGGCG TACCGAATGCTGGCTCGTGCTCGACATTCCCAACCTGTACGCGACGGCGGTGGCCTCGGGCACCGATCCCATCGCGCTGC TGCGTCGTTTCCCGCTTGAACGCGTCGCATATGTGCATATTGCGGGCGGCCGTTTCGAGGGGGACCTGTATTGGGATACC CATGCCGACACCATCATCGAGCCGGTGGCTGATCTGCTGACCGAACTCGTGGCGCTCACTTCGGGCCGCAGCCTGGGCGT GCTGATCGAGCGTGACGGATCGATCGACGAAGCCAGCGTGAGTGCCGACCTGTCGATAGTCCGCCAGGCGATCAAGGCGG GTGTTGTTCATGCTTGA
Upstream 100 bases:
>100_bases ATGGCTTTTTCGAGCCGCTGGCACAAACCACTTACTAAGCTATCAACGTGGTAGCTAGACTGGCCTAGTTCGCCGGTCTT GAGATAAGGGGGTAACCGCG
Downstream 100 bases:
>100_bases TAACCGCGAGGTCCTGCGCCGCCGCCAGCTATCTGTGCTGTCGGATCTGCTGGCGGGCAATGCTCCGTCCGGTTTTGACG AGTACACGGCGCTGACAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MASSNHPLETVLADEPVVGACWRPELAAMFNQGAVTDDSLNLAFTEIVAENFRPGELPAELTRLREAGTVVVPHGVSLGL AGADLPDAKRVKHLAALAAELNAPMVSEHVAFVRAGFENGRHSGVLEAGHLLAPPRTTLALDVLVDNVSRVQDDLGVPLA LENVATTLQWPENELSEADYLRELSRRTECWLVLDIPNLYATAVASGTDPIALLRRFPLERVAYVHIAGGRFEGDLYWDT HADTIIEPVADLLTELVALTSGRSLGVLIERDGSIDEASVSADLSIVRQAIKAGVVHA
Sequences:
>Translated_298_residues MASSNHPLETVLADEPVVGACWRPELAAMFNQGAVTDDSLNLAFTEIVAENFRPGELPAELTRLREAGTVVVPHGVSLGL AGADLPDAKRVKHLAALAAELNAPMVSEHVAFVRAGFENGRHSGVLEAGHLLAPPRTTLALDVLVDNVSRVQDDLGVPLA LENVATTLQWPENELSEADYLRELSRRTECWLVLDIPNLYATAVASGTDPIALLRRFPLERVAYVHIAGGRFEGDLYWDT HADTIIEPVADLLTELVALTSGRSLGVLIERDGSIDEASVSADLSIVRQAIKAGVVHA >Mature_297_residues ASSNHPLETVLADEPVVGACWRPELAAMFNQGAVTDDSLNLAFTEIVAENFRPGELPAELTRLREAGTVVVPHGVSLGLA GADLPDAKRVKHLAALAAELNAPMVSEHVAFVRAGFENGRHSGVLEAGHLLAPPRTTLALDVLVDNVSRVQDDLGVPLAL ENVATTLQWPENELSEADYLRELSRRTECWLVLDIPNLYATAVASGTDPIALLRRFPLERVAYVHIAGGRFEGDLYWDTH ADTIIEPVADLLTELVALTSGRSLGVLIERDGSIDEASVSADLSIVRQAIKAGVVHA
Specific function: Unknown
COG id: COG3220
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the N-terminal section; belongs to the UPF0276 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007801 - InterPro: IPR013022 [H]
Pfam domain/function: PF05114 DUF692 [H]
EC number: NA
Molecular weight: Translated: 31965; Mature: 31833
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSNHPLETVLADEPVVGACWRPELAAMFNQGAVTDDSLNLAFTEIVAENFRPGELPAE CCCCCCCCHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCHH LTRLREAGTVVVPHGVSLGLAGADLPDAKRVKHLAALAAELNAPMVSEHVAFVRAGFENG HHHHHHCCCEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC RHSGVLEAGHLLAPPRTTLALDVLVDNVSRVQDDLGVPLALENVATTLQWPENELSEADY CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHCCCCHHHHHHHH LRELSRRTECWLVLDIPNLYATAVASGTDPIALLRRFPLERVAYVHIAGGRFEGDLYWDT HHHHHCCCCEEEEEECCCHHHHHHCCCCCHHHHHHHCCHHHEEEEEEECCEECCCEEECC HADTIIEPVADLLTELVALTSGRSLGVLIERDGSIDEASVSADLSIVRQAIKAGVVHA CHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ASSNHPLETVLADEPVVGACWRPELAAMFNQGAVTDDSLNLAFTEIVAENFRPGELPAE CCCCCCCHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCHH LTRLREAGTVVVPHGVSLGLAGADLPDAKRVKHLAALAAELNAPMVSEHVAFVRAGFENG HHHHHHCCCEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC RHSGVLEAGHLLAPPRTTLALDVLVDNVSRVQDDLGVPLALENVATTLQWPENELSEADY CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHCCCCHHHHHHHH LRELSRRTECWLVLDIPNLYATAVASGTDPIALLRRFPLERVAYVHIAGGRFEGDLYWDT HHHHHCCCCEEEEEECCCHHHHHHCCCCCHHHHHHHCCHHHEEEEEEECCEECCCEEECC HADTIIEPVADLLTELVALTSGRSLGVLIERDGSIDEASVSADLSIVRQAIKAGVVHA CHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]