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The map label for this gene is yhcM [H]

Identifier: 169630058

GI number: 169630058

Start: 3034113

End: 3035159

Strand: Reverse

Name: yhcM [H]

Synonym: MAB_2975c

Alternate gene names: 169630058

Gene position: 3035159-3034113 (Counterclockwise)

Preceding gene: 169630064

Following gene: 169630057

Centisome position: 59.9

GC content: 65.33

Gene sequence:

>1047_bases
GTGAGTGATCCGCAATCCGGTGCCGCTTTGTGCCTCCAGCACCTTGCCGACCGGCACCCCACGGTCTCCAACGAGCGGTT
GATCGCCCAGTTGGTGCCGCCCCCAACGTTCAGTTCGGTCAGCTTTGACTCCTACCGGCCAGATCCCAACGAGCCGACGC
AGACGGCGGCCGTAGAGGCGTGCCGGGCCTTCGCCCAGGAGGCGACTACCCGCCGGGCGGGCAAGAAGAAGCTGTTCGGC
AAGCGGGAGGTGCTGCCCGGGGTGGGCATCTATCTCGACGGCGGGTTCGGTGTCGGTAAGACCCACCTGTTGGCGTCGAT
CTATCACACGGTGCCCGGCCCGAAGGCGTTTGCGAGCTTCGGCGAACTGACGCAGGTCGCAAGCGTTTTCGGCTTCCTGG
AGTGCATCGAACTGCTGGCCGACTACACCGTGGTGTGCATCGACGAGTTCGAGCTGGACGACCCGGGCAACACGACGCTG
GTATCTCGGTTGCTCTCGGAGTTGGTAGCGCGTGGGGTGTCCATCGCCGCGACTTCCAACACGCTTCCCGAACAACTCGG
GGAGGGGCGGTTCGCGGCCCAGGACTTCCTACGTGAGATCGCGGCGCTGTCGGCGATCTTCAACACCGTGCGTGTCGAGG
GACCGGACTACCGGCACCGCGATTTGCCGCCCGCGCCCGAACCGCATTCCGACGAGCAGCTTCGCGAGCTGGCGGGGGCC
ATCAACGGCGCCACCTTCGACCGGTTCGACGACCTGTGCAAACACCTGGCGAGCATGCATCCGTCCCGGTACCTGACCCT
GATCGAAGGTGTCACGGCTGTTTTCATCGCGGACGTGGAGCAGGTGCACGATCAGTCGGTGGCGCTGCGGATCGTGGCCC
TGACGGACCGTCTGTACGACGCGGGGATCCCGGTGCAGGCGTCGGGCGCCAAGCTCAACACGATCTTCGATGACGAGATG
GTGGCCGGTGGCTTCCGCAAGAAGTATCTGCGCGCCACCTCGCGGTTGCTGGCACTTAGTGCGGCGCCGTTACCGAACGC
TGCATGA

Upstream 100 bases:

>100_bases
TGGTCAGCTGTGTGAGCTGCGTCCCAGCCGGGCCGCGAATCGCCTGTTCATCGTCACTGTCGGCCACAAAGAGATCTCAA
CACGCCGTTACGCTGCCCGT

Downstream 100 bases:

>100_bases
CGTAGTCGTTTTCCAGGCGCTCACCCACCAAGAAGGTCTTGGTGCCGCTGCGGGTGAAGCCATGCTTGAGGTAAAAGCGT
TGTGCGCGTTCATTTTCTTG

Product: AFG1-like ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MSDPQSGAALCLQHLADRHPTVSNERLIAQLVPPPTFSSVSFDSYRPDPNEPTQTAAVEACRAFAQEATTRRAGKKKLFG
KREVLPGVGIYLDGGFGVGKTHLLASIYHTVPGPKAFASFGELTQVASVFGFLECIELLADYTVVCIDEFELDDPGNTTL
VSRLLSELVARGVSIAATSNTLPEQLGEGRFAAQDFLREIAALSAIFNTVRVEGPDYRHRDLPPAPEPHSDEQLRELAGA
INGATFDRFDDLCKHLASMHPSRYLTLIEGVTAVFIADVEQVHDQSVALRIVALTDRLYDAGIPVQASGAKLNTIFDDEM
VAGGFRKKYLRATSRLLALSAAPLPNAA

Sequences:

>Translated_348_residues
MSDPQSGAALCLQHLADRHPTVSNERLIAQLVPPPTFSSVSFDSYRPDPNEPTQTAAVEACRAFAQEATTRRAGKKKLFG
KREVLPGVGIYLDGGFGVGKTHLLASIYHTVPGPKAFASFGELTQVASVFGFLECIELLADYTVVCIDEFELDDPGNTTL
VSRLLSELVARGVSIAATSNTLPEQLGEGRFAAQDFLREIAALSAIFNTVRVEGPDYRHRDLPPAPEPHSDEQLRELAGA
INGATFDRFDDLCKHLASMHPSRYLTLIEGVTAVFIADVEQVHDQSVALRIVALTDRLYDAGIPVQASGAKLNTIFDDEM
VAGGFRKKYLRATSRLLALSAAPLPNAA
>Mature_347_residues
SDPQSGAALCLQHLADRHPTVSNERLIAQLVPPPTFSSVSFDSYRPDPNEPTQTAAVEACRAFAQEATTRRAGKKKLFGK
REVLPGVGIYLDGGFGVGKTHLLASIYHTVPGPKAFASFGELTQVASVFGFLECIELLADYTVVCIDEFELDDPGNTTLV
SRLLSELVARGVSIAATSNTLPEQLGEGRFAAQDFLREIAALSAIFNTVRVEGPDYRHRDLPPAPEPHSDEQLRELAGAI
NGATFDRFDDLCKHLASMHPSRYLTLIEGVTAVFIADVEQVHDQSVALRIVALTDRLYDAGIPVQASGAKLNTIFDDEMV
AGGFRKKYLRATSRLLALSAAPLPNAA

Specific function: Unknown

COG id: COG1485

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AFG1 ATPase family [H]

Homologues:

Organism=Homo sapiens, GI21918872, Length=293, Percent_Identity=24.9146757679181, Blast_Score=70, Evalue=3e-12,
Organism=Escherichia coli, GI1789627, Length=311, Percent_Identity=28.2958199356913, Blast_Score=80, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005654 [H]

Pfam domain/function: PF03969 AFG1_ATPase [H]

EC number: NA

Molecular weight: Translated: 37605; Mature: 37474

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDPQSGAALCLQHLADRHPTVSNERLIAQLVPPPTFSSVSFDSYRPDPNEPTQTAAVEA
CCCCCHHHHHHHHHHHHCCCCCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHH
CRAFAQEATTRRAGKKKLFGKREVLPGVGIYLDGGFGVGKTHLLASIYHTVPGPKAFASF
HHHHHHHHHHHHHHHHHHCCCHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHHH
GELTQVASVFGFLECIELLADYTVVCIDEFELDDPGNTTLVSRLLSELVARGVSIAATSN
HHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCEEEEECCC
TLPEQLGEGRFAAQDFLREIAALSAIFNTVRVEGPDYRHRDLPPAPEPHSDEQLRELAGA
CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
INGATFDRFDDLCKHLASMHPSRYLTLIEGVTAVFIADVEQVHDQSVALRIVALTDRLYD
HCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHEEHHHHHHHHHH
AGIPVQASGAKLNTIFDDEMVAGGFRKKYLRATSRLLALSAAPLPNAA
CCCCEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SDPQSGAALCLQHLADRHPTVSNERLIAQLVPPPTFSSVSFDSYRPDPNEPTQTAAVEA
CCCCHHHHHHHHHHHHCCCCCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHH
CRAFAQEATTRRAGKKKLFGKREVLPGVGIYLDGGFGVGKTHLLASIYHTVPGPKAFASF
HHHHHHHHHHHHHHHHHHCCCHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHHH
GELTQVASVFGFLECIELLADYTVVCIDEFELDDPGNTTLVSRLLSELVARGVSIAATSN
HHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCEEEEECCC
TLPEQLGEGRFAAQDFLREIAALSAIFNTVRVEGPDYRHRDLPPAPEPHSDEQLRELAGA
CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
INGATFDRFDDLCKHLASMHPSRYLTLIEGVTAVFIADVEQVHDQSVALRIVALTDRLYD
HCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHEEHHHHHHHHHH
AGIPVQASGAKLNTIFDDEMVAGGFRKKYLRATSRLLALSAAPLPNAA
CCCCEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]