| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is hmp [H]
Identifier: 169630049
GI number: 169630049
Start: 3027204
End: 3027524
Strand: Reverse
Name: hmp [H]
Synonym: MAB_2966c
Alternate gene names: 169630049
Gene position: 3027524-3027204 (Counterclockwise)
Preceding gene: 169630050
Following gene: 169630048
Centisome position: 59.75
GC content: 61.68
Gene sequence:
>321_bases GTGACAACCGAGGCGATCCGAGTCGCGGGCAGTGACGCCACTGGGAATACCGTGCTGGAAGTCGAAATCTATGGCAGCAC ACATATTCTCGACTGGCCGCGGGGTAAGAAACTGCTCGACGTGCTGCTGGATGCGGGTATCGACGCGCCCTACGTGTGCC GCGAATCGGCTTGCGCTACCTGCATCTGCTCGGTGAAGGGGGGCCAGACACGCATGCTCATGAACGAGTCGCTCATCGAC AGCGAGGTGGCCGACGGGTTCACGCTGGCCTGCCAGACATTGCCGGAGTCGGAGCGGGTGCAGATCTTCTTCGACGGATG A
Upstream 100 bases:
>100_bases ATATCGACACCGAAGAACTGCTACATGAGTGGCAGGGGATTCTCTTCGGTGCCGATGGCGAGCTCAATGATCGCCTACCC GGGCGCCGCGCGGTGGGCCA
Downstream 100 bases:
>100_bases TTCGGCGGGCAGGGAATGCCTCCCGCGACACCCGCTTCATGTCGCGCCAGGTGTCGCGGGAAAATTCCGTTCGAGTCCAC CCGTAGGCCCGGGGCAGTAG
Product: hemoglobin-like protein HMP
Products: NA
Alternate protein names: Rieske-type oxygenase; RO [H]
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MTTEAIRVAGSDATGNTVLEVEIYGSTHILDWPRGKKLLDVLLDAGIDAPYVCRESACATCICSVKGGQTRMLMNESLID SEVADGFTLACQTLPESERVQIFFDG
Sequences:
>Translated_106_residues MTTEAIRVAGSDATGNTVLEVEIYGSTHILDWPRGKKLLDVLLDAGIDAPYVCRESACATCICSVKGGQTRMLMNESLID SEVADGFTLACQTLPESERVQIFFDG >Mature_105_residues TTEAIRVAGSDATGNTVLEVEIYGSTHILDWPRGKKLLDVLLDAGIDAPYVCRESACATCICSVKGGQTRMLMNESLIDS EVADGFTLACQTLPESERVQIFFDG
Specific function: Catalyzes the opening of ring B of 1,4-androstadiene- 3,17,-dione (ADD) and 4-androstene-3,17-dione (ADD) with concomitant aromatization of ring A. The ring B is subsequently hydroxylated to yield a catechol and then subject to meta- cleavage [H]
COG id: COG1018
COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding FR-type domain [H]
Homologues:
Organism=Escherichia coli, GI1787658, Length=71, Percent_Identity=42.2535211267606, Blast_Score=60, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR017927 - InterPro: IPR001041 - InterPro: IPR001709 - InterPro: IPR008333 - InterPro: IPR001433 - InterPro: IPR001221 - InterPro: IPR017938 [H]
Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 11431; Mature: 11300
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTEAIRVAGSDATGNTVLEVEIYGSTHILDWPRGKKLLDVLLDAGIDAPYVCRESACAT CCCCEEEEECCCCCCCEEEEEEECCCEEEEECCCCHHHHHHHHHCCCCCCCEECCCCCEE CICSVKGGQTRMLMNESLIDSEVADGFTLACQTLPESERVQIFFDG EEEECCCCCEEEEECCCCCCCHHCCCEEEEEECCCCCCCEEEEECC >Mature Secondary Structure TTEAIRVAGSDATGNTVLEVEIYGSTHILDWPRGKKLLDVLLDAGIDAPYVCRESACAT CCCEEEEECCCCCCCEEEEEEECCCEEEEECCCCHHHHHHHHHCCCCCCCEECCCCCEE CICSVKGGQTRMLMNESLIDSEVADGFTLACQTLPESERVQIFFDG EEEECCCCCEEEEECCCCCCCHHCCCEEEEEECCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: FAD [C]
Metal ions: Iron-Sulfur [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]