| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169630032
Identifier: 169630032
GI number: 169630032
Start: 3005447
End: 3006322
Strand: Reverse
Name: 169630032
Synonym: MAB_2949c
Alternate gene names: NA
Gene position: 3006322-3005447 (Counterclockwise)
Preceding gene: 169630033
Following gene: 169630031
Centisome position: 59.33
GC content: 60.05
Gene sequence:
>876_bases ATGCCGGACGAAGAACTGGCATTCGACGACGAAGGCCTGAACGTTTGGACTGACGAAGACCGATTCGAGGTAACCCGCGA ACGACTGGTCGAATACGCCCGGGCGACCAATGATCCAATCCCTGCTCATTTGGCTGGCGATGTGGCTCCGCCGGTTTTCG CGATCGTGCCTGTTTTCGAATCCTTGCTCACGCCGACGGTCGATGTCGCACCGGTTGAGCTGATACCGCGAGTAGTTCAC GGCGAGCAGGATTTTCACTTTCACCGTCCCATCCGACCCGGAGACAAACTGGTGTCGCGCGGCAAGATGATCGGCTATGA GGGGCTGGAGAAGGGTACTCGGGCGGCGGTGTATCTGGAATGCCGTACCGAGGATGGTGAGCTGGTCAATGAGCAGTACG TGACGTGCTTCTTCCGGGGCCATGATGCCGGCAAGAAGGTGGGTGAGCTTAGCCCTGGGCACAAATTCGACGAGGTCCTG CGTGGCCAAGCCCCGCTGGCCAAGATTGTGCAGCACGTCGACTCGGATCAGACATACCGGTATTCGCCGGCGGCAGGCGA CCCGATGCCGATTCATCTCGACGAGGAGATCGCCAGGGACGCGGGGCTTCCGGGAATCATCGCCCACGGCCTGTGCACCA TGGCGTTTACCTCATGGGCCGTGCTTACCGAAGTTGGTGGGTCTGATGTCAATCGGCTCAAGAGATTCGCGGTGAGATTC TCCAAGATGGTGTTTCCCGGAGACGACCTGGAAACTCGTATCTGGCAGACCGGCCGCATCGGGTATGCGACGTCGTACGC ATTCGAGACCGCGCGAACCGGAGAGAACGGCGAGGAGTTCGCCATCACAGACGGCCTGGCCGTCATCGCTGACTAG
Upstream 100 bases:
>100_bases GTGAAGGGCGCTTTGGCAAAGGCGGTGGAGAAGGACGGCGCCAAGCAGCTTGACAAGACGCTTGCGCAGCTCGACGCACT AGCCTCGGCGGCGGTCTGAA
Downstream 100 bases:
>100_bases CCCAATCGCATAGGAGTATTCAGGTGGGAGTTTTGGAAGGACGGGTCGCCGTCATCACCGGTGCCGGTCGCGGTATCGGA CGCGAACACGCGCTGTTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: 3-Alpha 7-Alpha; Dehydratase; Dehydrogenase; MaoC Domain Protein Dehydratase; UfaA2 Protein; Short-Chain Dehydrogenase/Reductase SDR; MaoC-Like Domain-Containing; Acyl Dehydratase; 2-Enoyl Acyl-CoA Hydratase; MaoC Domain-Containing Protein Dehydratase; MaoC Family Dehydrogenase/Dehydratase; MaoC Like Domain Protein
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MPDEELAFDDEGLNVWTDEDRFEVTRERLVEYARATNDPIPAHLAGDVAPPVFAIVPVFESLLTPTVDVAPVELIPRVVH GEQDFHFHRPIRPGDKLVSRGKMIGYEGLEKGTRAAVYLECRTEDGELVNEQYVTCFFRGHDAGKKVGELSPGHKFDEVL RGQAPLAKIVQHVDSDQTYRYSPAAGDPMPIHLDEEIARDAGLPGIIAHGLCTMAFTSWAVLTEVGGSDVNRLKRFAVRF SKMVFPGDDLETRIWQTGRIGYATSYAFETARTGENGEEFAITDGLAVIAD
Sequences:
>Translated_291_residues MPDEELAFDDEGLNVWTDEDRFEVTRERLVEYARATNDPIPAHLAGDVAPPVFAIVPVFESLLTPTVDVAPVELIPRVVH GEQDFHFHRPIRPGDKLVSRGKMIGYEGLEKGTRAAVYLECRTEDGELVNEQYVTCFFRGHDAGKKVGELSPGHKFDEVL RGQAPLAKIVQHVDSDQTYRYSPAAGDPMPIHLDEEIARDAGLPGIIAHGLCTMAFTSWAVLTEVGGSDVNRLKRFAVRF SKMVFPGDDLETRIWQTGRIGYATSYAFETARTGENGEEFAITDGLAVIAD >Mature_290_residues PDEELAFDDEGLNVWTDEDRFEVTRERLVEYARATNDPIPAHLAGDVAPPVFAIVPVFESLLTPTVDVAPVELIPRVVHG EQDFHFHRPIRPGDKLVSRGKMIGYEGLEKGTRAAVYLECRTEDGELVNEQYVTCFFRGHDAGKKVGELSPGHKFDEVLR GQAPLAKIVQHVDSDQTYRYSPAAGDPMPIHLDEEIARDAGLPGIIAHGLCTMAFTSWAVLTEVGGSDVNRLKRFAVRFS KMVFPGDDLETRIWQTGRIGYATSYAFETARTGENGEEFAITDGLAVIAD
Specific function: Unknown
COG id: COG2030
COG function: function code I; Acyl dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4504505, Length=220, Percent_Identity=28.1818181818182, Blast_Score=82, Evalue=7e-16, Organism=Caenorhabditis elegans, GI17532783, Length=213, Percent_Identity=30.9859154929577, Blast_Score=97, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6322861, Length=241, Percent_Identity=28.6307053941909, Blast_Score=72, Evalue=1e-13, Organism=Drosophila melanogaster, GI18859837, Length=273, Percent_Identity=27.8388278388278, Blast_Score=83, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32203; Mature: 32071
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDEELAFDDEGLNVWTDEDRFEVTRERLVEYARATNDPIPAHLAGDVAPPVFAIVPVFE CCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHH SLLTPTVDVAPVELIPRVVHGEQDFHFHRPIRPGDKLVSRGKMIGYEGLEKGTRAAVYLE HHHCCCCCCCHHHHHHHHHCCCCCCEECCCCCCHHHHHHCCCCCCHHHHCCCCCEEEEEE CRTEDGELVNEQYVTCFFRGHDAGKKVGELSPGHKFDEVLRGQAPLAKIVQHVDSDQTYR EECCCCCCCCCCEEEEEEECCCCCCHHCCCCCCCHHHHHHCCCCHHHHHHHHCCCCCCEE YSPAAGDPMPIHLDEEIARDAGLPGIIAHGLCTMAFTSWAVLTEVGGSDVNRLKRFAVRF ECCCCCCCCEEEECHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH SKMVFPGDDLETRIWQTGRIGYATSYAFETARTGENGEEFAITDGLAVIAD HHHCCCCCCHHHHHHHCCCCCEEHHHHHHHHCCCCCCCEEEEECCEEEECC >Mature Secondary Structure PDEELAFDDEGLNVWTDEDRFEVTRERLVEYARATNDPIPAHLAGDVAPPVFAIVPVFE CCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHH SLLTPTVDVAPVELIPRVVHGEQDFHFHRPIRPGDKLVSRGKMIGYEGLEKGTRAAVYLE HHHCCCCCCCHHHHHHHHHCCCCCCEECCCCCCHHHHHHCCCCCCHHHHCCCCCEEEEEE CRTEDGELVNEQYVTCFFRGHDAGKKVGELSPGHKFDEVLRGQAPLAKIVQHVDSDQTYR EECCCCCCCCCCEEEEEEECCCCCCHHCCCCCCCHHHHHHCCCCHHHHHHHHCCCCCCEE YSPAAGDPMPIHLDEEIARDAGLPGIIAHGLCTMAFTSWAVLTEVGGSDVNRLKRFAVRF ECCCCCCCCEEEECHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH SKMVFPGDDLETRIWQTGRIGYATSYAFETARTGENGEEFAITDGLAVIAD HHHCCCCCCHHHHHHHCCCCCEEHHHHHHHHCCCCCCCEEEEECCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA