| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630028
Identifier: 169630028
GI number: 169630028
Start: 3001089
End: 3002183
Strand: Reverse
Name: 169630028
Synonym: MAB_2945c
Alternate gene names: NA
Gene position: 3002183-3001089 (Counterclockwise)
Preceding gene: 169630029
Following gene: 169630027
Centisome position: 59.25
GC content: 58.54
Gene sequence:
>1095_bases ATGGTTCGCGTGGTGCCGGTGTTGGCGATGGTGGCGGTGATATGCGGCGTGGGGGCACTCTGGCCGACGCAGCATCGCCG CTACATCACTGTGACGGCGCAGTTCGATAGTGCCGCCGGTTTGTATCCGGGTAGCACGGTTGCGGTTCTGGGGATGCGTG TGGGCAGTGTCGAGAAGATCACCCCCGAGGGTGGCTATGTTGAGGTCGAATTCACTGTCGATAGGCAGGTGGCGTTGCCG GCTGACGTGCAGGCGGTGACGATTTCGACCTCCATCCTGACCGACCGTCAGATCGAACTCACTCCGCCGTACAGGGGAGG GGCGGTGATGCACGATAACGAGACCATCGGGTTGAACCGCACGAAGACACCTGTCGAATTCTCCCGCGTGGTGGCCGTAC TGGACAAGCTGTCGATCTCACTTAGGGGCGATGGCGAGGGCGGCGGGCCTGTAGCGGACATCGTGAACACCGGTGCTGAC GCCGTAGACGGTAACGGGCAGAAGATCAAAGGCGCTCTCGATGAGCTGTCACGGGCACTGCGGCTGGGCGCCGACGGTGG CCGCGTGACGGCGGAGCAGCTCGCGACTGTTATCAAAAATGTCGGTACCCTGATGGACGCGGCGGCCCGCAACGACAGTA AGCTACGAGAATTCACCTCAACCATTCACCAATTGAGCCAAATAGTTGACGATGAGAGTCTCGGCACGGGCAGCGTTGGG CGCAAACTCAATGATGTGCTGAAGCAGGCGGCAGAGGTTCTGGAAACTAATCGCGATCACATCAAACAATCCGTACTCAA CGGAGACGGCGCTTTCAAGACCTTGGTCGACCAGCAACGAGAGCTCACCGAACTCGTCGACGTGCTACCTCTAGCCCTTG ACAATCTCTACAACATCATCGACCAGGACAACGGCGCTGTCCGCACCCGCGCCATGGTCGATCACATACTGTTCGACAGC CAGCACATCAAAGAGATCTGCAATCTTATGGGACTACGCCAATTGGGTTGCAGCACAGGCACGATGAAAGATTTCGGACC CGACTTCGGGCTGACATACATACTCGACGGTTTAGCGGCGATGGGACAAAAATAG
Upstream 100 bases:
>100_bases CACATCAAGGGCGCCCGAGTGGTGCTGCGTAGCGGCGGGGGGATTGTCTATCGGGAGCGCCAGGGCCAAGAAGGAGCTGC GGGTGTCAAACAGAGTTGGC
Downstream 100 bases:
>100_bases GCAGGCGACCTAAGGATTCGGCAAGGGTTGTGTCATGGCCAGAGTAGGCGAGCCCGCCACTGCTAGGGCTTGGATACGAG ACGAGCGGAGAAATAGTGAA
Product: putative Mce family protein
Products: NA
Alternate protein names: Mce Family Protein; MCE-Family D; Secreted Protein; MCE Family Protein; Mce Family D; MCE-Family Protein; Mammalian Cell Entry Related Domain Protein; Mce-Related Protein; MCE-Family; Mammalian Cell Entry-Like Domain-Containing Protein; Virulence Factor MCE-Like Protein
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MVRVVPVLAMVAVICGVGALWPTQHRRYITVTAQFDSAAGLYPGSTVAVLGMRVGSVEKITPEGGYVEVEFTVDRQVALP ADVQAVTISTSILTDRQIELTPPYRGGAVMHDNETIGLNRTKTPVEFSRVVAVLDKLSISLRGDGEGGGPVADIVNTGAD AVDGNGQKIKGALDELSRALRLGADGGRVTAEQLATVIKNVGTLMDAAARNDSKLREFTSTIHQLSQIVDDESLGTGSVG RKLNDVLKQAAEVLETNRDHIKQSVLNGDGAFKTLVDQQRELTELVDVLPLALDNLYNIIDQDNGAVRTRAMVDHILFDS QHIKEICNLMGLRQLGCSTGTMKDFGPDFGLTYILDGLAAMGQK
Sequences:
>Translated_364_residues MVRVVPVLAMVAVICGVGALWPTQHRRYITVTAQFDSAAGLYPGSTVAVLGMRVGSVEKITPEGGYVEVEFTVDRQVALP ADVQAVTISTSILTDRQIELTPPYRGGAVMHDNETIGLNRTKTPVEFSRVVAVLDKLSISLRGDGEGGGPVADIVNTGAD AVDGNGQKIKGALDELSRALRLGADGGRVTAEQLATVIKNVGTLMDAAARNDSKLREFTSTIHQLSQIVDDESLGTGSVG RKLNDVLKQAAEVLETNRDHIKQSVLNGDGAFKTLVDQQRELTELVDVLPLALDNLYNIIDQDNGAVRTRAMVDHILFDS QHIKEICNLMGLRQLGCSTGTMKDFGPDFGLTYILDGLAAMGQK >Mature_364_residues MVRVVPVLAMVAVICGVGALWPTQHRRYITVTAQFDSAAGLYPGSTVAVLGMRVGSVEKITPEGGYVEVEFTVDRQVALP ADVQAVTISTSILTDRQIELTPPYRGGAVMHDNETIGLNRTKTPVEFSRVVAVLDKLSISLRGDGEGGGPVADIVNTGAD AVDGNGQKIKGALDELSRALRLGADGGRVTAEQLATVIKNVGTLMDAAARNDSKLREFTSTIHQLSQIVDDESLGTGSVG RKLNDVLKQAAEVLETNRDHIKQSVLNGDGAFKTLVDQQRELTELVDVLPLALDNLYNIIDQDNGAVRTRAMVDHILFDS QHIKEICNLMGLRQLGCSTGTMKDFGPDFGLTYILDGLAAMGQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38965; Mature: 38965
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRVVPVLAMVAVICGVGALWPTQHRRYITVTAQFDSAAGLYPGSTVAVLGMRVGSVEKI CCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHCCCCEEE TPEGGYVEVEFTVDRQVALPADVQAVTISTSILTDRQIELTPPYRGGAVMHDNETIGLNR CCCCCEEEEEEEECCEEECCCCCEEEEEEHHHCCCCEEEECCCCCCCEEEECCCEECCCC TKTPVEFSRVVAVLDKLSISLRGDGEGGGPVADIVNTGADAVDGNGQKIKGALDELSRAL CCCCHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH RLGADGGRVTAEQLATVIKNVGTLMDAAARNDSKLREFTSTIHQLSQIVDDESLGTGSVG HCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHH RKLNDVLKQAAEVLETNRDHIKQSVLNGDGAFKTLVDQQRELTELVDVLPLALDNLYNII HHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DQDNGAVRTRAMVDHILFDSQHIKEICNLMGLRQLGCSTGTMKDFGPDFGLTYILDGLAA CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHH MGQK HCCC >Mature Secondary Structure MVRVVPVLAMVAVICGVGALWPTQHRRYITVTAQFDSAAGLYPGSTVAVLGMRVGSVEKI CCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHCCCCEEE TPEGGYVEVEFTVDRQVALPADVQAVTISTSILTDRQIELTPPYRGGAVMHDNETIGLNR CCCCCEEEEEEEECCEEECCCCCEEEEEEHHHCCCCEEEECCCCCCCEEEECCCEECCCC TKTPVEFSRVVAVLDKLSISLRGDGEGGGPVADIVNTGADAVDGNGQKIKGALDELSRAL CCCCHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH RLGADGGRVTAEQLATVIKNVGTLMDAAARNDSKLREFTSTIHQLSQIVDDESLGTGSVG HCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHH RKLNDVLKQAAEVLETNRDHIKQSVLNGDGAFKTLVDQQRELTELVDVLPLALDNLYNII HHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DQDNGAVRTRAMVDHILFDSQHIKEICNLMGLRQLGCSTGTMKDFGPDFGLTYILDGLAA CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHH MGQK HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA