| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is ywqG [H]
Identifier: 169630001
GI number: 169630001
Start: 2969302
End: 2970189
Strand: Reverse
Name: ywqG [H]
Synonym: MAB_2918c
Alternate gene names: 169630001
Gene position: 2970189-2969302 (Counterclockwise)
Preceding gene: 169630002
Following gene: 169629998
Centisome position: 58.62
GC content: 61.82
Gene sequence:
>888_bases ATGGGGATTCTTGCGGGGTTGGATGAGTTGCTTGCCGAACTGTCCGCCGATGCTGTCGGCCTGAAACCTGAGCCAGGGGA CCCCGATATTAGGTCCTCATACTTGGGTGGGCATCCATACTGGCCAGAAGGCAGTCAGTGGCCCAACTACCGCGGCGAAC CGATGTCGTTCGTGTGCCAAATCAATTTCGCCGAGGTCCCGCCTCTGCCGGGCTACCCGACAGAAGGGTTGCTGCAGTGG TTCGTCGGCAGCGACGATGTCGCAGGGATGACGTTCGATGACACCCAGGGCACCCAAGGGTTCGAAGTCAGGTGGATCAC CGACCTGAGCGCCCCGTCCACGCGCTACGTCTCCTACCCGACACGGCCATACGGCGACTGCGGCCAAGAGCTTTTCGGCG TAGTCGGCCGCTGCCCTGGATATGACGCGCCCTACAGCTTTCAGGAACTCAATCCACTGCCGTATCGCATCGTGTTCGAA CGAGTAAAGACACTGCCCGACCATGCAAACCGGTTCACTGACCGCCAGCGCCAAACCTTCTGGGCCGCAATCCAAAACGC AGGACTATCCGAGGGCGAAGACCTACTGGATGCACCGTACCCGTACTACGGCCTGTCAATAGCGTGGATGGACCACGTCT ACCACAACGACTCGAGCCCCCACTGGCGCCACCCCCACATCGGCGGCCACCCCAGATTCATCCAAGAAGACGTACGCGGC ACGGGAAACTATGCGGCCATTAAAGATCCAGCCTCGAGCGTGCTACTGAGCATCGGCGGCGGCGACCTATGCGACTGGTG GTCCGGCGGCACAGCCAGCCTCTTCGGCGACCCCCGCGCGCTAGCCGCCGCAGACCTCACCTCGATCCGCTATCACACCG ACCGCTAG
Upstream 100 bases:
>100_bases CCGACTTAATGTAGGACACCAACCGTTCGGCGAGATTGCGGCGGGCGATCTCGCCGGCATCGACACAGTAGGTTGCTGAT CTTCGCTATAGTTGATGGTT
Downstream 100 bases:
>100_bases CTCACTCACCCCCGCCGAAATGAAGGGTGCGCGATGACCTCAAAGGCCGCCGCAAAGACCATGGCCGTCGCCATCATGCT GACAATGACCATGCCGACAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MGILAGLDELLAELSADAVGLKPEPGDPDIRSSYLGGHPYWPEGSQWPNYRGEPMSFVCQINFAEVPPLPGYPTEGLLQW FVGSDDVAGMTFDDTQGTQGFEVRWITDLSAPSTRYVSYPTRPYGDCGQELFGVVGRCPGYDAPYSFQELNPLPYRIVFE RVKTLPDHANRFTDRQRQTFWAAIQNAGLSEGEDLLDAPYPYYGLSIAWMDHVYHNDSSPHWRHPHIGGHPRFIQEDVRG TGNYAAIKDPASSVLLSIGGGDLCDWWSGGTASLFGDPRALAAADLTSIRYHTDR
Sequences:
>Translated_295_residues MGILAGLDELLAELSADAVGLKPEPGDPDIRSSYLGGHPYWPEGSQWPNYRGEPMSFVCQINFAEVPPLPGYPTEGLLQW FVGSDDVAGMTFDDTQGTQGFEVRWITDLSAPSTRYVSYPTRPYGDCGQELFGVVGRCPGYDAPYSFQELNPLPYRIVFE RVKTLPDHANRFTDRQRQTFWAAIQNAGLSEGEDLLDAPYPYYGLSIAWMDHVYHNDSSPHWRHPHIGGHPRFIQEDVRG TGNYAAIKDPASSVLLSIGGGDLCDWWSGGTASLFGDPRALAAADLTSIRYHTDR >Mature_294_residues GILAGLDELLAELSADAVGLKPEPGDPDIRSSYLGGHPYWPEGSQWPNYRGEPMSFVCQINFAEVPPLPGYPTEGLLQWF VGSDDVAGMTFDDTQGTQGFEVRWITDLSAPSTRYVSYPTRPYGDCGQELFGVVGRCPGYDAPYSFQELNPLPYRIVFER VKTLPDHANRFTDRQRQTFWAAIQNAGLSEGEDLLDAPYPYYGLSIAWMDHVYHNDSSPHWRHPHIGGHPRFIQEDVRGT GNYAAIKDPASSVLLSIGGGDLCDWWSGGTASLFGDPRALAAADLTSIRYHTDR
Specific function: Unknown
COG id: COG3878
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015315 [H]
Pfam domain/function: PF09234 DUF1963 [H]
EC number: NA
Molecular weight: Translated: 32706; Mature: 32575
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGILAGLDELLAELSADAVGLKPEPGDPDIRSSYLGGHPYWPEGSQWPNYRGEPMSFVCQ CCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEE INFAEVPPLPGYPTEGLLQWFVGSDDVAGMTFDDTQGTQGFEVRWITDLSAPSTRYVSYP EEHHCCCCCCCCCHHHHHHHHCCCCCCCCEEECCCCCCCCEEEEEEECCCCCCCEEEECC TRPYGDCGQELFGVVGRCPGYDAPYSFQELNPLPYRIVFERVKTLPDHANRFTDRQRQTF CCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHH WAAIQNAGLSEGEDLLDAPYPYYGLSIAWMDHVYHNDSSPHWRHPHIGGHPRFIQEDVRG HHHHHHCCCCCCCHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCC TGNYAAIKDPASSVLLSIGGGDLCDWWSGGTASLFGDPRALAAADLTSIRYHTDR CCCEEEECCCHHHEEEECCCCCCCCCCCCCCEEECCCCHHHHHHHHHHEEEECCC >Mature Secondary Structure GILAGLDELLAELSADAVGLKPEPGDPDIRSSYLGGHPYWPEGSQWPNYRGEPMSFVCQ CHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEE INFAEVPPLPGYPTEGLLQWFVGSDDVAGMTFDDTQGTQGFEVRWITDLSAPSTRYVSYP EEHHCCCCCCCCCHHHHHHHHCCCCCCCCEEECCCCCCCCEEEEEEECCCCCCCEEEECC TRPYGDCGQELFGVVGRCPGYDAPYSFQELNPLPYRIVFERVKTLPDHANRFTDRQRQTF CCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHH WAAIQNAGLSEGEDLLDAPYPYYGLSIAWMDHVYHNDSSPHWRHPHIGGHPRFIQEDVRG HHHHHHCCCCCCCHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCC TGNYAAIKDPASSVLLSIGGGDLCDWWSGGTASLFGDPRALAAADLTSIRYHTDR CCCEEEECCCHHHEEEECCCCCCCCCCCCCCEEECCCCHHHHHHHHHHEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]