| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169629970
Identifier: 169629970
GI number: 169629970
Start: 2940005
End: 2940424
Strand: Reverse
Name: 169629970
Synonym: MAB_2886c
Alternate gene names: NA
Gene position: 2940424-2940005 (Counterclockwise)
Preceding gene: 169629972
Following gene: 169629968
Centisome position: 58.03
GC content: 61.9
Gene sequence:
>420_bases ATGGCCACACAAACAGTCGCCCCGGCGCCTGAATCGACAACTCGCTGGCACACCGCACGTGCCGTTCTCGCACTACCGTT CACCGTGGCCGTCTTGGTGCCACTGGTAATCCTGTACGGAACGGGCATCGGGGTGCCCTCGTGGATGTCCGATCAGATGT CGATCACCGCGACAGTGATCGGAACCCTGCTGATCGCGGCCGGCTCATTCCTGGTGACCCGCACCGTCGCACAATTCGAT CAACCGGGAAGCAGGCATGTGCGCAGCCCGTTGATCACCGGTGTCGTTGCCATCCTGCTGGGTGAGGCGTTCGCGGTGAA CTCGGTGGGTCTGCTGATCTGGACCGCGGTCTTCGTGACGATGAGCGCCATCTATTTCTCGCTGGTCGACGAGCATGGGG CGTTGAAGGTTCGGTCCTGA
Upstream 100 bases:
>100_bases GCGTTACTGTGATGTCAACGACTGTTGGTCAACAAGTGTTGACAGTGTATGTCAGGCAGGCGTACATCTAAGACATCCGA AAAGTGAGGGGAGGCCCGTC
Downstream 100 bases:
>100_bases CGGCCCGCTAGGGCGCAGGGGTGTCGATGTACTGCTGAACGATCGGCGCCATCCAGTTCACGATGTCCTGATGCGTCATT TCGATGACGGGGCTGAGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MATQTVAPAPESTTRWHTARAVLALPFTVAVLVPLVILYGTGIGVPSWMSDQMSITATVIGTLLIAAGSFLVTRTVAQFD QPGSRHVRSPLITGVVAILLGEAFAVNSVGLLIWTAVFVTMSAIYFSLVDEHGALKVRS
Sequences:
>Translated_139_residues MATQTVAPAPESTTRWHTARAVLALPFTVAVLVPLVILYGTGIGVPSWMSDQMSITATVIGTLLIAAGSFLVTRTVAQFD QPGSRHVRSPLITGVVAILLGEAFAVNSVGLLIWTAVFVTMSAIYFSLVDEHGALKVRS >Mature_138_residues ATQTVAPAPESTTRWHTARAVLALPFTVAVLVPLVILYGTGIGVPSWMSDQMSITATVIGTLLIAAGSFLVTRTVAQFDQ PGSRHVRSPLITGVVAILLGEAFAVNSVGLLIWTAVFVTMSAIYFSLVDEHGALKVRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14679; Mature: 14548
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATQTVAPAPESTTRWHTARAVLALPFTVAVLVPLVILYGTGIGVPSWMSDQMSITATVI CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH GTLLIAAGSFLVTRTVAQFDQPGSRHVRSPLITGVVAILLGEAFAVNSVGLLIWTAVFVT HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MSAIYFSLVDEHGALKVRS HHHHHHHHHHCCCCEEECC >Mature Secondary Structure ATQTVAPAPESTTRWHTARAVLALPFTVAVLVPLVILYGTGIGVPSWMSDQMSITATVI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH GTLLIAAGSFLVTRTVAQFDQPGSRHVRSPLITGVVAILLGEAFAVNSVGLLIWTAVFVT HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MSAIYFSLVDEHGALKVRS HHHHHHHHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA