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The map label for this gene is ycbL [C]

Identifier: 169629957

GI number: 169629957

Start: 2926169

End: 2926840

Strand: Reverse

Name: ycbL [C]

Synonym: MAB_2873c

Alternate gene names: 169629957

Gene position: 2926840-2926169 (Counterclockwise)

Preceding gene: 169629960

Following gene: 169629956

Centisome position: 57.76

GC content: 63.99

Gene sequence:

>672_bases
GTGCTGATCACCGGTTTTCCCGCGGGGATGTTCGCGACGAACTGCTATATCGTGGCGCCGCACGAGGGCGGCCCGGCCGT
CATCGTCGACCCCGGGCAGGACGCCATCGGGGGCGTCAAGGAGATTCTCGCCGAGCGTGATCTCACCCCGGAAGCGGTGT
TGCTGACGCACGGGCATCTGGATCACACCTGGACAGCGCAGCCTCTTGCCGATGAATATGGGATTCCCGTGTACATCCAT
CCCGATGACCGCGTGATGCTCGCCGATCCGCTGGCCGGGATCGGTCCGGGGCTGGGCCAGTTCATTCAGGGCCAGGTGTT
CGCCGAGCCCAAGGAGTTGGTCGAGATCGGGGACGGCGACAAATTGGAGCTCGCCGGGATCACGCTCACCGTCGACCACA
CCCCGGGGCACACCCGCGGTTCTGTCGTGTTCGGTATCGAGGTTGATAGCGAGAACGGTCCCGTCGACGTGCTTTTCAGT
GGTGACACCCTGTTCCAGATGTCGATTGGGCGCACCGATCTACCCGGCGGAAACCACCAGCAGCTGCTCGATTCGATCGC
CGCCAAGCTGCTTACGCGCGATGACTCCAGCGTTGTGCTGCCGGGACATGGCAATGCCACCAGCATCGGCGACGAGCGCC
GCGCCAACCCATTCCTCGAGGGAATCCAGTGA

Upstream 100 bases:

>100_bases
TAGGGCGTCAATTGCAGAATCATCGAAGAATGTAGGTCGCCAGAGAGTGTGCCAGCCACACCTGAGAGAAGACACGGGAC
CCGCCGCCTAAGCTGGTCGG

Downstream 100 bases:

>100_bases
GCGAGAAGACCTTCAGCGCGCCCAAGGGCATTCCGGACTATGTGCCGCCGGACTCGGCGCAGTTCTTGGCGGTCCGCGAT
GGGCTACTGGAGCAGGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MLITGFPAGMFATNCYIVAPHEGGPAVIVDPGQDAIGGVKEILAERDLTPEAVLLTHGHLDHTWTAQPLADEYGIPVYIH
PDDRVMLADPLAGIGPGLGQFIQGQVFAEPKELVEIGDGDKLELAGITLTVDHTPGHTRGSVVFGIEVDSENGPVDVLFS
GDTLFQMSIGRTDLPGGNHQQLLDSIAAKLLTRDDSSVVLPGHGNATSIGDERRANPFLEGIQ

Sequences:

>Translated_223_residues
MLITGFPAGMFATNCYIVAPHEGGPAVIVDPGQDAIGGVKEILAERDLTPEAVLLTHGHLDHTWTAQPLADEYGIPVYIH
PDDRVMLADPLAGIGPGLGQFIQGQVFAEPKELVEIGDGDKLELAGITLTVDHTPGHTRGSVVFGIEVDSENGPVDVLFS
GDTLFQMSIGRTDLPGGNHQQLLDSIAAKLLTRDDSSVVLPGHGNATSIGDERRANPFLEGIQ
>Mature_223_residues
MLITGFPAGMFATNCYIVAPHEGGPAVIVDPGQDAIGGVKEILAERDLTPEAVLLTHGHLDHTWTAQPLADEYGIPVYIH
PDDRVMLADPLAGIGPGLGQFIQGQVFAEPKELVEIGDGDKLELAGITLTVDHTPGHTRGSVVFGIEVDSENGPVDVLFS
GDTLFQMSIGRTDLPGGNHQQLLDSIAAKLLTRDDSSVVLPGHGNATSIGDERRANPFLEGIQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]

Homologues:

Organism=Escherichia coli, GI1787158, Length=220, Percent_Identity=36.8181818181818, Blast_Score=124, Evalue=4e-30,
Organism=Caenorhabditis elegans, GI17538952, Length=212, Percent_Identity=28.3018867924528, Blast_Score=80, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 23556; Mature: 23556

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLITGFPAGMFATNCYIVAPHEGGPAVIVDPGQDAIGGVKEILAERDLTPEAVLLTHGHL
CEEECCCCCHHHCEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCC
DHTWTAQPLADEYGIPVYIHPDDRVMLADPLAGIGPGLGQFIQGQVFAEPKELVEIGDGD
CCEECCCCCHHHCCCEEEECCCCCEEEECCCCCCCCCHHHHHCCEEECCCHHHEECCCCC
KLELAGITLTVDHTPGHTRGSVVFGIEVDSENGPVDVLFSGDTLFQMSIGRTDLPGGNHQ
EEEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEECCCEEEEEECCCCCCCCCCHH
QLLDSIAAKLLTRDDSSVVLPGHGNATSIGDERRANPFLEGIQ
HHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCHHCCCC
>Mature Secondary Structure
MLITGFPAGMFATNCYIVAPHEGGPAVIVDPGQDAIGGVKEILAERDLTPEAVLLTHGHL
CEEECCCCCHHHCEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCC
DHTWTAQPLADEYGIPVYIHPDDRVMLADPLAGIGPGLGQFIQGQVFAEPKELVEIGDGD
CCEECCCCCHHHCCCEEEECCCCCEEEECCCCCCCCCHHHHHCCEEECCCHHHEECCCCC
KLELAGITLTVDHTPGHTRGSVVFGIEVDSENGPVDVLFSGDTLFQMSIGRTDLPGGNHQ
EEEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEECCCEEEEEECCCCCCCCCCHH
QLLDSIAAKLLTRDDSSVVLPGHGNATSIGDERRANPFLEGIQ
HHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]