| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629878
Identifier: 169629878
GI number: 169629878
Start: 2844261
End: 2844713
Strand: Reverse
Name: 169629878
Synonym: MAB_2794c
Alternate gene names: NA
Gene position: 2844713-2844261 (Counterclockwise)
Preceding gene: 169629879
Following gene: 169629877
Centisome position: 56.14
GC content: 62.69
Gene sequence:
>453_bases GTGAGGCGCGTGGCCGAGGCTGAATGGGACGTTGTTCTCAAACCACATCTGTCGCCGTATTTCGTGTACGGGGCCGCGCT GGTGATCGCGGCAGCGCATATCGCCGTCGGATTCCTGTTGAAGATCTCGCCCAGCGGGGTGATCTTCAAGACCTCTGATC AGGTCGGTATCGCTCTGGTGGGCATCGTGATCGCGTGTGTGGTCCTGATGTTCGCCCGCCCGCGCGTGCGGGCCGGTTCG GCCGGTATCGAGGTGCGTAATGTGCTGGGCCCCAAACTCATTCCGTGGTCCGAGGTGGTCGGGGTGTCGTTTCCCCCGGG CGCGCAATGGGCGCGACTGGATTTGGAGGACTTTGAGTACGAGCCAATGATGGCGATCCAGGCGATCGACAAACAGCGGG CCGTTGACGCGATGGACGCACTGCGGGAAGTGTTGGGCAAGTACCGCGGCTAG
Upstream 100 bases:
>100_bases GCGCCGGTCTGCCCGGATCCGCGGAAGACAAGGGCGCTCAGGCGGCGGCCGCGGCGCTGGACACCGCGCTGACCCTGCGC CGGCTGCGCCAACCCTGGGC
Downstream 100 bases:
>100_bases GGGCCGTGCCCTCCGGCGACCGCTCGATCGGTGTCCCGCATGTATCGCGGATATCGCGCAGTTCCCCATCGCGGTGCCCA CGTCCAAGTATCGTGAGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MRRVAEAEWDVVLKPHLSPYFVYGAALVIAAAHIAVGFLLKISPSGVIFKTSDQVGIALVGIVIACVVLMFARPRVRAGS AGIEVRNVLGPKLIPWSEVVGVSFPPGAQWARLDLEDFEYEPMMAIQAIDKQRAVDAMDALREVLGKYRG
Sequences:
>Translated_150_residues MRRVAEAEWDVVLKPHLSPYFVYGAALVIAAAHIAVGFLLKISPSGVIFKTSDQVGIALVGIVIACVVLMFARPRVRAGS AGIEVRNVLGPKLIPWSEVVGVSFPPGAQWARLDLEDFEYEPMMAIQAIDKQRAVDAMDALREVLGKYRG >Mature_150_residues MRRVAEAEWDVVLKPHLSPYFVYGAALVIAAAHIAVGFLLKISPSGVIFKTSDQVGIALVGIVIACVVLMFARPRVRAGS AGIEVRNVLGPKLIPWSEVVGVSFPPGAQWARLDLEDFEYEPMMAIQAIDKQRAVDAMDALREVLGKYRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019692 [H]
Pfam domain/function: PF10756 DUF2581 [H]
EC number: NA
Molecular weight: Translated: 16331; Mature: 16331
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRVAEAEWDVVLKPHLSPYFVYGAALVIAAAHIAVGFLLKISPSGVIFKTSDQVGIALV CCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCHHHHHH GIVIACVVLMFARPRVRAGSAGIEVRNVLGPKLIPWSEVVGVSFPPGAQWARLDLEDFEY HHHHHHHHHHHCCCCCCCCCCCCEEHHHCCCCCCCHHHHHCCCCCCCCCEEECCCCCCCC EPMMAIQAIDKQRAVDAMDALREVLGKYRG CHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRRVAEAEWDVVLKPHLSPYFVYGAALVIAAAHIAVGFLLKISPSGVIFKTSDQVGIALV CCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCHHHHHH GIVIACVVLMFARPRVRAGSAGIEVRNVLGPKLIPWSEVVGVSFPPGAQWARLDLEDFEY HHHHHHHHHHHCCCCCCCCCCCCEEHHHCCCCCCCHHHHHCCCCCCCCCEEECCCCCCCC EPMMAIQAIDKQRAVDAMDALREVLGKYRG CHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]