| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629877
Identifier: 169629877
GI number: 169629877
Start: 2842831
End: 2844114
Strand: Reverse
Name: 169629877
Synonym: MAB_2793c
Alternate gene names: NA
Gene position: 2844114-2842831 (Counterclockwise)
Preceding gene: 169629878
Following gene: 169629876
Centisome position: 56.13
GC content: 68.3
Gene sequence:
>1284_bases GTGGCGACTACGAGAACATCGGCGCGTTGTGGGCCCGCCCGCGTATCGCTGACATCCGTACGCGACGCGCACGAGCTCTT TGTGACGGGCCAGGTAGATGGTTCATATCTGGAGTCGATACCGCTGCCGCGCCTGGTGACCGACAGCTGGCAGCGCAGCC TGGCCACCGGGGTCGATCCTGACCGAGGGCCAGGTGAGGCGGCTGCCGCCACGCAACTGACCGAATTACGCAACAGTCAT CCGCTCGCCCGGGCGCTGCCGGTGATCCGCCGCCTACTGGTGGATCACGCTGCCGACTCAGGTGCACTTGTCGGGGTCAC CGCTGCCGATGGCGCGCTGCTCTGGGTGGAGGGCGATTCCGGGGCAGGCCGCAAGGCGGCCGCGATGAATTTTGTTCCGG GTGCCGATTGGAGTGAGCGCGCCGTGGGCACCAACGCCCCGGGTACCGCGCTGGCGCTGGACCGCGAGGTACAGATCCGG GGGAGCGAACACTTCTGCAGGCTGGTGCGACCCTGGTCGTGCACCGCGGTCCCGATACACGACCCGCTGTCCGGAACGCC ACTGGGGAGTCTGGACCTTACCGGCGGTGTGGACATCGCCTCCCCGCAGACCTTGGCGCTGGTGCGTGCGACGGCGGTGG CCGTCGAGCATTTCATCGCCCTGGACTATCCGGGGCGCGTTCAGGTAGACGCCGACACCGGGCCCCGGCTGACCCTGCTC GGTGTCGGCCGCCCGGTGCTACACACCGCGGACGGCGAACGCACACATCGGCTGTCGGGACGTCATGCCGAGATCCTGGC GCTGTTGCTTAGGCACCCCGAGGGCCTGAGCGCCGATCACCTGGCGATGCTGCTCGACGAGAACGACCTCGACGTGGTGA CCATTCGCGCGGAAATGTCGCGACTACGCCGCATCGTGGGAGGCGAGCTGATCGGGTCACGGCCGTACCGGCTGCTCAAG AAGGTGCGAAGCGACATGGCTGATGTCTTCTCCGCACTGCGGGCGGGGGAGATCGCCAACGCCATGGATCACTATCACGG TGAGCTGCTGCCTCGTTCGGCGGCGCCGGCGGTTGCGCGGTTGCGCCTGGAGCTGAGCACCAGCCTTCGGGGTGCCGTCC TGGCCAGCGGCGATCTGCACTTGCTGCGCCGCTGGCTAGATCTGCCGGAGGCTCGGGACAACCGTGAGGGCTGGCAAGGG CTGCACGATCACCCCGGCGCGGGCGCGGTGGCGCGGTCGGAGGCTCGCGGTCACCTGATCGCGCTGGATTCAGACTTGGC CTGA
Upstream 100 bases:
>100_bases GCGGATATCGCGCAGTTCCCCATCGCGGTGCCCACGTCCAAGTATCGTGAGAATATCGGCCGTGCCTGCAAGAACGGCGA TGGCAGAGAGCTTGGAGACT
Downstream 100 bases:
>100_bases GCCCGGCGCGCGCCGGAGTGAAGGTTGCAACCGTGCTGCAACGGGCCACTACCTACCTTGAGTGATCACCGACACATCTG TCGCCTTGAAGGTAGGAGAC
Product: putative transcriptional regulator
Products: NA
Alternate protein names: ORF3 [H]
Number of amino acids: Translated: 427; Mature: 426
Protein sequence:
>427_residues MATTRTSARCGPARVSLTSVRDAHELFVTGQVDGSYLESIPLPRLVTDSWQRSLATGVDPDRGPGEAAAATQLTELRNSH PLARALPVIRRLLVDHAADSGALVGVTAADGALLWVEGDSGAGRKAAAMNFVPGADWSERAVGTNAPGTALALDREVQIR GSEHFCRLVRPWSCTAVPIHDPLSGTPLGSLDLTGGVDIASPQTLALVRATAVAVEHFIALDYPGRVQVDADTGPRLTLL GVGRPVLHTADGERTHRLSGRHAEILALLLRHPEGLSADHLAMLLDENDLDVVTIRAEMSRLRRIVGGELIGSRPYRLLK KVRSDMADVFSALRAGEIANAMDHYHGELLPRSAAPAVARLRLELSTSLRGAVLASGDLHLLRRWLDLPEARDNREGWQG LHDHPGAGAVARSEARGHLIALDSDLA
Sequences:
>Translated_427_residues MATTRTSARCGPARVSLTSVRDAHELFVTGQVDGSYLESIPLPRLVTDSWQRSLATGVDPDRGPGEAAAATQLTELRNSH PLARALPVIRRLLVDHAADSGALVGVTAADGALLWVEGDSGAGRKAAAMNFVPGADWSERAVGTNAPGTALALDREVQIR GSEHFCRLVRPWSCTAVPIHDPLSGTPLGSLDLTGGVDIASPQTLALVRATAVAVEHFIALDYPGRVQVDADTGPRLTLL GVGRPVLHTADGERTHRLSGRHAEILALLLRHPEGLSADHLAMLLDENDLDVVTIRAEMSRLRRIVGGELIGSRPYRLLK KVRSDMADVFSALRAGEIANAMDHYHGELLPRSAAPAVARLRLELSTSLRGAVLASGDLHLLRRWLDLPEARDNREGWQG LHDHPGAGAVARSEARGHLIALDSDLA >Mature_426_residues ATTRTSARCGPARVSLTSVRDAHELFVTGQVDGSYLESIPLPRLVTDSWQRSLATGVDPDRGPGEAAAATQLTELRNSHP LARALPVIRRLLVDHAADSGALVGVTAADGALLWVEGDSGAGRKAAAMNFVPGADWSERAVGTNAPGTALALDREVQIRG SEHFCRLVRPWSCTAVPIHDPLSGTPLGSLDLTGGVDIASPQTLALVRATAVAVEHFIALDYPGRVQVDADTGPRLTLLG VGRPVLHTADGERTHRLSGRHAEILALLLRHPEGLSADHLAMLLDENDLDVVTIRAEMSRLRRIVGGELIGSRPYRLLKK VRSDMADVFSALRAGEIANAMDHYHGELLPRSAAPAVARLRLELSTSLRGAVLASGDLHLLRRWLDLPEARDNREGWQGL HDHPGAGAVARSEARGHLIALDSDLA
Specific function: Unknown
COG id: COG3284
COG function: function code QK; Transcriptional activator of acetoin/glycerol metabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45578; Mature: 45447
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTRTSARCGPARVSLTSVRDAHELFVTGQVDGSYLESIPLPRLVTDSWQRSLATGVDP CCCCCCCCCCCCCEEEHHHHCCCEEEEEEECCCCHHHHHCCCCHHHHHHHHHHHHCCCCC DRGPGEAAAATQLTELRNSHPLARALPVIRRLLVDHAADSGALVGVTAADGALLWVEGDS CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCC GAGRKAAAMNFVPGADWSERAVGTNAPGTALALDREVQIRGSEHFCRLVRPWSCTAVPIH CCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCEEEECCCHHHHHHCCCCCCEEEECC DPLSGTPLGSLDLTGGVDIASPQTLALVRATAVAVEHFIALDYPGRVQVDADTGPRLTLL CCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCEEEEE GVGRPVLHTADGERTHRLSGRHAEILALLLRHPEGLSADHLAMLLDENDLDVVTIRAEMS ECCCCEEECCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEHHHHH RLRRIVGGELIGSRPYRLLKKVRSDMADVFSALRAGEIANAMDHYHGELLPRSAAPAVAR HHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH LRLELSTSLRGAVLASGDLHLLRRWLDLPEARDNREGWQGLHDHPGAGAVARSEARGHLI EEEEECCCCCCEEEECCCHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCEEHHCCCCCEE ALDSDLA EECCCCC >Mature Secondary Structure ATTRTSARCGPARVSLTSVRDAHELFVTGQVDGSYLESIPLPRLVTDSWQRSLATGVDP CCCCCCCCCCCCEEEHHHHCCCEEEEEEECCCCHHHHHCCCCHHHHHHHHHHHHCCCCC DRGPGEAAAATQLTELRNSHPLARALPVIRRLLVDHAADSGALVGVTAADGALLWVEGDS CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCC GAGRKAAAMNFVPGADWSERAVGTNAPGTALALDREVQIRGSEHFCRLVRPWSCTAVPIH CCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCEEEECCCHHHHHHCCCCCCEEEECC DPLSGTPLGSLDLTGGVDIASPQTLALVRATAVAVEHFIALDYPGRVQVDADTGPRLTLL CCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCEEEEE GVGRPVLHTADGERTHRLSGRHAEILALLLRHPEGLSADHLAMLLDENDLDVVTIRAEMS ECCCCEEECCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEHHHHH RLRRIVGGELIGSRPYRLLKKVRSDMADVFSALRAGEIANAMDHYHGELLPRSAAPAVAR HHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH LRLELSTSLRGAVLASGDLHLLRRWLDLPEARDNREGWQGLHDHPGAGAVARSEARGHLI EEEEECCCCCCEEEECCCHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCEEHHCCCCCEE ALDSDLA EECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7836301 [H]