Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

Click here to switch to the map view.

The map label for this gene is 169629877

Identifier: 169629877

GI number: 169629877

Start: 2842831

End: 2844114

Strand: Reverse

Name: 169629877

Synonym: MAB_2793c

Alternate gene names: NA

Gene position: 2844114-2842831 (Counterclockwise)

Preceding gene: 169629878

Following gene: 169629876

Centisome position: 56.13

GC content: 68.3

Gene sequence:

>1284_bases
GTGGCGACTACGAGAACATCGGCGCGTTGTGGGCCCGCCCGCGTATCGCTGACATCCGTACGCGACGCGCACGAGCTCTT
TGTGACGGGCCAGGTAGATGGTTCATATCTGGAGTCGATACCGCTGCCGCGCCTGGTGACCGACAGCTGGCAGCGCAGCC
TGGCCACCGGGGTCGATCCTGACCGAGGGCCAGGTGAGGCGGCTGCCGCCACGCAACTGACCGAATTACGCAACAGTCAT
CCGCTCGCCCGGGCGCTGCCGGTGATCCGCCGCCTACTGGTGGATCACGCTGCCGACTCAGGTGCACTTGTCGGGGTCAC
CGCTGCCGATGGCGCGCTGCTCTGGGTGGAGGGCGATTCCGGGGCAGGCCGCAAGGCGGCCGCGATGAATTTTGTTCCGG
GTGCCGATTGGAGTGAGCGCGCCGTGGGCACCAACGCCCCGGGTACCGCGCTGGCGCTGGACCGCGAGGTACAGATCCGG
GGGAGCGAACACTTCTGCAGGCTGGTGCGACCCTGGTCGTGCACCGCGGTCCCGATACACGACCCGCTGTCCGGAACGCC
ACTGGGGAGTCTGGACCTTACCGGCGGTGTGGACATCGCCTCCCCGCAGACCTTGGCGCTGGTGCGTGCGACGGCGGTGG
CCGTCGAGCATTTCATCGCCCTGGACTATCCGGGGCGCGTTCAGGTAGACGCCGACACCGGGCCCCGGCTGACCCTGCTC
GGTGTCGGCCGCCCGGTGCTACACACCGCGGACGGCGAACGCACACATCGGCTGTCGGGACGTCATGCCGAGATCCTGGC
GCTGTTGCTTAGGCACCCCGAGGGCCTGAGCGCCGATCACCTGGCGATGCTGCTCGACGAGAACGACCTCGACGTGGTGA
CCATTCGCGCGGAAATGTCGCGACTACGCCGCATCGTGGGAGGCGAGCTGATCGGGTCACGGCCGTACCGGCTGCTCAAG
AAGGTGCGAAGCGACATGGCTGATGTCTTCTCCGCACTGCGGGCGGGGGAGATCGCCAACGCCATGGATCACTATCACGG
TGAGCTGCTGCCTCGTTCGGCGGCGCCGGCGGTTGCGCGGTTGCGCCTGGAGCTGAGCACCAGCCTTCGGGGTGCCGTCC
TGGCCAGCGGCGATCTGCACTTGCTGCGCCGCTGGCTAGATCTGCCGGAGGCTCGGGACAACCGTGAGGGCTGGCAAGGG
CTGCACGATCACCCCGGCGCGGGCGCGGTGGCGCGGTCGGAGGCTCGCGGTCACCTGATCGCGCTGGATTCAGACTTGGC
CTGA

Upstream 100 bases:

>100_bases
GCGGATATCGCGCAGTTCCCCATCGCGGTGCCCACGTCCAAGTATCGTGAGAATATCGGCCGTGCCTGCAAGAACGGCGA
TGGCAGAGAGCTTGGAGACT

Downstream 100 bases:

>100_bases
GCCCGGCGCGCGCCGGAGTGAAGGTTGCAACCGTGCTGCAACGGGCCACTACCTACCTTGAGTGATCACCGACACATCTG
TCGCCTTGAAGGTAGGAGAC

Product: putative transcriptional regulator

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 427; Mature: 426

Protein sequence:

>427_residues
MATTRTSARCGPARVSLTSVRDAHELFVTGQVDGSYLESIPLPRLVTDSWQRSLATGVDPDRGPGEAAAATQLTELRNSH
PLARALPVIRRLLVDHAADSGALVGVTAADGALLWVEGDSGAGRKAAAMNFVPGADWSERAVGTNAPGTALALDREVQIR
GSEHFCRLVRPWSCTAVPIHDPLSGTPLGSLDLTGGVDIASPQTLALVRATAVAVEHFIALDYPGRVQVDADTGPRLTLL
GVGRPVLHTADGERTHRLSGRHAEILALLLRHPEGLSADHLAMLLDENDLDVVTIRAEMSRLRRIVGGELIGSRPYRLLK
KVRSDMADVFSALRAGEIANAMDHYHGELLPRSAAPAVARLRLELSTSLRGAVLASGDLHLLRRWLDLPEARDNREGWQG
LHDHPGAGAVARSEARGHLIALDSDLA

Sequences:

>Translated_427_residues
MATTRTSARCGPARVSLTSVRDAHELFVTGQVDGSYLESIPLPRLVTDSWQRSLATGVDPDRGPGEAAAATQLTELRNSH
PLARALPVIRRLLVDHAADSGALVGVTAADGALLWVEGDSGAGRKAAAMNFVPGADWSERAVGTNAPGTALALDREVQIR
GSEHFCRLVRPWSCTAVPIHDPLSGTPLGSLDLTGGVDIASPQTLALVRATAVAVEHFIALDYPGRVQVDADTGPRLTLL
GVGRPVLHTADGERTHRLSGRHAEILALLLRHPEGLSADHLAMLLDENDLDVVTIRAEMSRLRRIVGGELIGSRPYRLLK
KVRSDMADVFSALRAGEIANAMDHYHGELLPRSAAPAVARLRLELSTSLRGAVLASGDLHLLRRWLDLPEARDNREGWQG
LHDHPGAGAVARSEARGHLIALDSDLA
>Mature_426_residues
ATTRTSARCGPARVSLTSVRDAHELFVTGQVDGSYLESIPLPRLVTDSWQRSLATGVDPDRGPGEAAAATQLTELRNSHP
LARALPVIRRLLVDHAADSGALVGVTAADGALLWVEGDSGAGRKAAAMNFVPGADWSERAVGTNAPGTALALDREVQIRG
SEHFCRLVRPWSCTAVPIHDPLSGTPLGSLDLTGGVDIASPQTLALVRATAVAVEHFIALDYPGRVQVDADTGPRLTLLG
VGRPVLHTADGERTHRLSGRHAEILALLLRHPEGLSADHLAMLLDENDLDVVTIRAEMSRLRRIVGGELIGSRPYRLLKK
VRSDMADVFSALRAGEIANAMDHYHGELLPRSAAPAVARLRLELSTSLRGAVLASGDLHLLRRWLDLPEARDNREGWQGL
HDHPGAGAVARSEARGHLIALDSDLA

Specific function: Unknown

COG id: COG3284

COG function: function code QK; Transcriptional activator of acetoin/glycerol metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45578; Mature: 45447

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATTRTSARCGPARVSLTSVRDAHELFVTGQVDGSYLESIPLPRLVTDSWQRSLATGVDP
CCCCCCCCCCCCCEEEHHHHCCCEEEEEEECCCCHHHHHCCCCHHHHHHHHHHHHCCCCC
DRGPGEAAAATQLTELRNSHPLARALPVIRRLLVDHAADSGALVGVTAADGALLWVEGDS
CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCC
GAGRKAAAMNFVPGADWSERAVGTNAPGTALALDREVQIRGSEHFCRLVRPWSCTAVPIH
CCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCEEEECCCHHHHHHCCCCCCEEEECC
DPLSGTPLGSLDLTGGVDIASPQTLALVRATAVAVEHFIALDYPGRVQVDADTGPRLTLL
CCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCEEEEE
GVGRPVLHTADGERTHRLSGRHAEILALLLRHPEGLSADHLAMLLDENDLDVVTIRAEMS
ECCCCEEECCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEHHHHH
RLRRIVGGELIGSRPYRLLKKVRSDMADVFSALRAGEIANAMDHYHGELLPRSAAPAVAR
HHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
LRLELSTSLRGAVLASGDLHLLRRWLDLPEARDNREGWQGLHDHPGAGAVARSEARGHLI
EEEEECCCCCCEEEECCCHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCEEHHCCCCCEE
ALDSDLA
EECCCCC
>Mature Secondary Structure 
ATTRTSARCGPARVSLTSVRDAHELFVTGQVDGSYLESIPLPRLVTDSWQRSLATGVDP
CCCCCCCCCCCCEEEHHHHCCCEEEEEEECCCCHHHHHCCCCHHHHHHHHHHHHCCCCC
DRGPGEAAAATQLTELRNSHPLARALPVIRRLLVDHAADSGALVGVTAADGALLWVEGDS
CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCC
GAGRKAAAMNFVPGADWSERAVGTNAPGTALALDREVQIRGSEHFCRLVRPWSCTAVPIH
CCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCEEEECCCHHHHHHCCCCCCEEEECC
DPLSGTPLGSLDLTGGVDIASPQTLALVRATAVAVEHFIALDYPGRVQVDADTGPRLTLL
CCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCEEEEE
GVGRPVLHTADGERTHRLSGRHAEILALLLRHPEGLSADHLAMLLDENDLDVVTIRAEMS
ECCCCEEECCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEHHHHH
RLRRIVGGELIGSRPYRLLKKVRSDMADVFSALRAGEIANAMDHYHGELLPRSAAPAVAR
HHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
LRLELSTSLRGAVLASGDLHLLRRWLDLPEARDNREGWQGLHDHPGAGAVARSEARGHLI
EEEEECCCCCCEEEECCCHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCEEHHCCCCCEE
ALDSDLA
EECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7836301 [H]