| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is proY [C]
Identifier: 169629875
GI number: 169629875
Start: 2839701
End: 2841128
Strand: Reverse
Name: proY [C]
Synonym: MAB_2791c
Alternate gene names: 169629875
Gene position: 2841128-2839701 (Counterclockwise)
Preceding gene: 169629876
Following gene: 169629874
Centisome position: 56.07
GC content: 62.82
Gene sequence:
>1428_bases ATGGCGACCACCAAACACGGACTCATCGAGGAACATCTCGAGAGCGCGGATTATCTACGCAAGCGTCAGCTCAGATCGGG AAGCGCGGGCTGGCTGCTGCTGGCCGGCCTCGGGGTGAGTTACGTGGTATCCGGGGACTACTCGGGCTGGAACTTCGGCT TGAGGCAAGGCGGATTCGGCGGGCTGGCGCTTGCCACTGTGGTCATCGCTGGTATGTACCTGGCACTGGTGCTGGGCATG GCGGAGCTTTCTTCGGCGCTCCCGACCGCAGGTGGCGGCTACACGTTCGCGCGTCGCGCCCTGGGCCCATGGGGTGGATT CGCTACTGGTACAGCCATTCTCATCGAGTACTCGATCGCTCCCGCCGCCATCGCCACCTTCATCGGCGCCTACGTGCAGT CGCTGGGATTGTTCGGGATCACCAACGGATGGTGGGTCTACCTGGCTGCCTATGCCTTTTTCATCGGAATCCATCTCTCC GGTGTCGGGGAGGCGCTGAAGGTGATGTTCGTCATCACCGCCATCGCCCTGGTGGGGCTATTGATCTTCGCGATTGCCGC AGCCGGTCATTTCGACCTCCACAACTTGACCAACATCGCGGCGGACGAAAGCGCGGCCGGATCGTCCAGCATCTTGCCGC ACGGTTACCTGGGCATCTGGGCTGCCATCCCGTTTGCCATTTGGTTCTTCCTCGCCGTGGAGGGCGTGCCGTTGGCAGCC GAGGAGACGGCCCACCCGGAACGCAACGTACCGCGCGGGATCATCGCGGCGATCGCCGTGCTGTTGGTCACCTGTGCGAC GGCGCTGGTGCTGACCACCGGTGCCGGTGGTGCGGAACAGATGTCCGATTCGGGTAATCCGTTGGTTGAGGCGCTTGGTC ACGGCACCGCCGCGAAATTGGTCAACTACATCGGGTTGGCCGGGCTTATCGCGAGCTTCTTCTCGATCATCTACGCCTAC TCGCGACAGTTGTTCGCACTGTCCCGCGCGGGTTATCTGCCGACGGTTCTTTCGGTGACCAATTCCCGCAAGGCGCCGAC GCTGGCGCTGATCGTCCCCGGTGTGGTCGGATTTGCGTTGTCACTGACCGGACATGGAGACCTGCTGCTGAACATGGCGG TCTTCGGGGCCGCCCTGAGCTATGTGCTGATGATGGTCAGCCATATCACGTTGCGGGTTCGCGAGCCGAATATGCCGCGG CCCTACCGCACACCGGGCGGAATCGTGACTACCAGCTTTGCGCTGATCGTGGCGGTGTTGGCAGTCGCCGCAACCTTCCT GGTCAATCCGGTGGCGGCCGGCTTGTGTCTGGCGGTCTTCGCGGCATTCATGGCGTATTTCGCGCTGTACAGCCGTCACC GCCTGGTGGCGAACTCGCCGGATGAGGAATTCGCGATACTGGCGGAGGCGGAAAGCGAGCTCACGTGA
Upstream 100 bases:
>100_bases GCTCCAAAGCCCAGGGATTCTTCTGACCGCCACCGTCGGCGATAACACCCGAAAGTGAAGTCATCCCACTGAATTGAACT GCAGAGAACAAGGAAACGAT
Downstream 100 bases:
>100_bases AGTATCGGCAACAGGTCGCCGGGGTGAACTACGCCTTTGACGGACTGGTGGATGTGATGGCCAAGGCGACCCCGTTGCGA TCGGGTGATGAGCTGGCCGG
Product: putative ethanolamine permease
Products: Proton [Cytoplasm]; L-proline [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 475; Mature: 474
Protein sequence:
>475_residues MATTKHGLIEEHLESADYLRKRQLRSGSAGWLLLAGLGVSYVVSGDYSGWNFGLRQGGFGGLALATVVIAGMYLALVLGM AELSSALPTAGGGYTFARRALGPWGGFATGTAILIEYSIAPAAIATFIGAYVQSLGLFGITNGWWVYLAAYAFFIGIHLS GVGEALKVMFVITAIALVGLLIFAIAAAGHFDLHNLTNIAADESAAGSSSILPHGYLGIWAAIPFAIWFFLAVEGVPLAA EETAHPERNVPRGIIAAIAVLLVTCATALVLTTGAGGAEQMSDSGNPLVEALGHGTAAKLVNYIGLAGLIASFFSIIYAY SRQLFALSRAGYLPTVLSVTNSRKAPTLALIVPGVVGFALSLTGHGDLLLNMAVFGAALSYVLMMVSHITLRVREPNMPR PYRTPGGIVTTSFALIVAVLAVAATFLVNPVAAGLCLAVFAAFMAYFALYSRHRLVANSPDEEFAILAEAESELT
Sequences:
>Translated_475_residues MATTKHGLIEEHLESADYLRKRQLRSGSAGWLLLAGLGVSYVVSGDYSGWNFGLRQGGFGGLALATVVIAGMYLALVLGM AELSSALPTAGGGYTFARRALGPWGGFATGTAILIEYSIAPAAIATFIGAYVQSLGLFGITNGWWVYLAAYAFFIGIHLS GVGEALKVMFVITAIALVGLLIFAIAAAGHFDLHNLTNIAADESAAGSSSILPHGYLGIWAAIPFAIWFFLAVEGVPLAA EETAHPERNVPRGIIAAIAVLLVTCATALVLTTGAGGAEQMSDSGNPLVEALGHGTAAKLVNYIGLAGLIASFFSIIYAY SRQLFALSRAGYLPTVLSVTNSRKAPTLALIVPGVVGFALSLTGHGDLLLNMAVFGAALSYVLMMVSHITLRVREPNMPR PYRTPGGIVTTSFALIVAVLAVAATFLVNPVAAGLCLAVFAAFMAYFALYSRHRLVANSPDEEFAILAEAESELT >Mature_474_residues ATTKHGLIEEHLESADYLRKRQLRSGSAGWLLLAGLGVSYVVSGDYSGWNFGLRQGGFGGLALATVVIAGMYLALVLGMA ELSSALPTAGGGYTFARRALGPWGGFATGTAILIEYSIAPAAIATFIGAYVQSLGLFGITNGWWVYLAAYAFFIGIHLSG VGEALKVMFVITAIALVGLLIFAIAAAGHFDLHNLTNIAADESAAGSSSILPHGYLGIWAAIPFAIWFFLAVEGVPLAAE ETAHPERNVPRGIIAAIAVLLVTCATALVLTTGAGGAEQMSDSGNPLVEALGHGTAAKLVNYIGLAGLIASFFSIIYAYS RQLFALSRAGYLPTVLSVTNSRKAPTLALIVPGVVGFALSLTGHGDLLLNMAVFGAALSYVLMMVSHITLRVREPNMPRP YRTPGGIVTTSFALIVAVLAVAATFLVNPVAAGLCLAVFAAFMAYFALYSRHRLVANSPDEEFAILAEAESELT
Specific function: Probable amino-acid or metabolite transport protein [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]
Homologues:
Organism=Homo sapiens, GI258645169, Length=443, Percent_Identity=23.7020316027088, Blast_Score=73, Evalue=7e-13, Organism=Homo sapiens, GI7657683, Length=372, Percent_Identity=26.6129032258064, Blast_Score=70, Evalue=6e-12, Organism=Homo sapiens, GI258614003, Length=444, Percent_Identity=23.6486486486486, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI258614005, Length=444, Percent_Identity=23.6486486486486, Blast_Score=68, Evalue=2e-11, Organism=Escherichia coli, GI1786602, Length=350, Percent_Identity=22.8571428571429, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1786302, Length=404, Percent_Identity=22.7722772277228, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI1790653, Length=347, Percent_Identity=24.4956772334294, Blast_Score=71, Evalue=1e-13, Organism=Drosophila melanogaster, GI24668806, Length=344, Percent_Identity=23.2558139534884, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI21356285, Length=344, Percent_Identity=23.2558139534884, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24668802, Length=344, Percent_Identity=23.2558139534884, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI221512776, Length=338, Percent_Identity=24.8520710059172, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI24666159, Length=338, Percent_Identity=24.8520710059172, Blast_Score=73, Evalue=5e-13, Organism=Drosophila melanogaster, GI24667468, Length=349, Percent_Identity=24.6418338108883, Blast_Score=69, Evalue=8e-12, Organism=Drosophila melanogaster, GI24641993, Length=183, Percent_Identity=30.0546448087432, Blast_Score=66, Evalue=6e-11, Organism=Drosophila melanogaster, GI24641995, Length=194, Percent_Identity=30.4123711340206, Blast_Score=66, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 49549; Mature: 49418
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTKHGLIEEHLESADYLRKRQLRSGSAGWLLLAGLGVSYVVSGDYSGWNFGLRQGGFG CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEHEECCCEEEEEECCCCCCCCCCCCCCCC GLALATVVIAGMYLALVLGMAELSSALPTAGGGYTFARRALGPWGGFATGTAILIEYSIA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHCCEEEEEECCH PAAIATFIGAYVQSLGLFGITNGWWVYLAAYAFFIGIHLSGVGEALKVMFVITAIALVGL HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIFAIAAAGHFDLHNLTNIAADESAAGSSSILPHGYLGIWAAIPFAIWFFLAVEGVPLAA HHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC EETAHPERNVPRGIIAAIAVLLVTCATALVLTTGAGGAEQMSDSGNPLVEALGHGTAAKL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHCCCHHHHH VNYIGLAGLIASFFSIIYAYSRQLFALSRAGYLPTVLSVTNSRKAPTLALIVPGVVGFAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEEHHHHHHHHH SLTGHGDLLLNMAVFGAALSYVLMMVSHITLRVREPNMPRPYRTPGGIVTTSFALIVAVL EECCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH AVAATFLVNPVAAGLCLAVFAAFMAYFALYSRHRLVANSPDEEFAILAEAESELT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCEEEEECCCCCCC >Mature Secondary Structure ATTKHGLIEEHLESADYLRKRQLRSGSAGWLLLAGLGVSYVVSGDYSGWNFGLRQGGFG CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEHEECCCEEEEEECCCCCCCCCCCCCCCC GLALATVVIAGMYLALVLGMAELSSALPTAGGGYTFARRALGPWGGFATGTAILIEYSIA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHCCEEEEEECCH PAAIATFIGAYVQSLGLFGITNGWWVYLAAYAFFIGIHLSGVGEALKVMFVITAIALVGL HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIFAIAAAGHFDLHNLTNIAADESAAGSSSILPHGYLGIWAAIPFAIWFFLAVEGVPLAA HHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC EETAHPERNVPRGIIAAIAVLLVTCATALVLTTGAGGAEQMSDSGNPLVEALGHGTAAKL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHCCCHHHHH VNYIGLAGLIASFFSIIYAYSRQLFALSRAGYLPTVLSVTNSRKAPTLALIVPGVVGFAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEEHHHHHHHHH SLTGHGDLLLNMAVFGAALSYVLMMVSHITLRVREPNMPRPYRTPGGIVTTSFALIVAVL EECCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH AVAATFLVNPVAAGLCLAVFAAFMAYFALYSRHRLVANSPDEEFAILAEAESELT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; L-proline [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-proline [Periplasm] = Proton [Cytoplasm] + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]