| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is yhbJ [C]
Identifier: 169629867
GI number: 169629867
Start: 2830674
End: 2831579
Strand: Reverse
Name: yhbJ [C]
Synonym: MAB_2783c
Alternate gene names: 169629867
Gene position: 2831579-2830674 (Counterclockwise)
Preceding gene: 169629868
Following gene: 169629866
Centisome position: 55.88
GC content: 64.9
Gene sequence:
>906_bases ATGGAGTCGATGACACTCCATCCACCTAGCGAGACCGCAAACGCCGATATCGACGTCGTGCTGGTCACGGGCCTATCGGG CGCGGGACGCGGCACTACCGCCAAGGTGCTCGAAGACCTCGGGTGGTACGTCGCCGACAATCTTCCGCCGGAACTGATCA CACGAATGGTCGACCTGGGCTTGGCCGCCGGTTCACGCATCACTCAGCTCGCTGTGGTGATGGATGTCCGGTCCCGAGGC TTCACCGGCGACCTCGAGTCCGTCCGCGCCGACCTGGCCACCCGCGGAATCAGTCCCCGGGTGCTGTTTCTGGAGGCGTC GGACGAGAGTCTGGTCCGCCGGTACGAGAACAACCGGCGGAGCCACCCGCTGCAGGGCGGCCAGACGCTCGCTGAGGGCA TCGCGGCGGAACGGGCGCTGCTTTCGTCGATACGGGCTTCGGCGGACCTGGTGATCGACACCTCGTCCCTTCCCGTCCCC GCCTTGCGCGCGGCCATCGAGCGTGCCTTCAGCAGCGAGTCCGTTGCACACATCAGCGTGACCGTCGAGTCCTTCGGTTT TAAGTACGGTCTCCCGATGGATGCGGATATGGTCGTCGACGTTCGGTTCTTGCCGAACCCGCACTGGGTGGATGAGCTGC GGCCACATACCGGACAACATCCCTCGGTCAGCCACTATGTGTTGAGCCAACCCGGTGCGGACGAGTTCTTGGACACCTAC CATCGGCTGCTGAACCTCGTGATCGACGGCTACCGGCGAGAGGGGAAGCGCTACATGACAATCGCGGTGGGGTGCACGGG CGGCAAGCATCGAAGCGTCGCGATAACCGAGGCGCTGGCCGCATCCTTGGCTCCCGACGACGACCTGTCGGTGCGGGTGT TGCACCGCGACCTGGGACGCGAATGA
Upstream 100 bases:
>100_bases GCGGCGACCGCGGTCGCGGTGCGTGAGGCCCTCATCGAAACTGACAGTTCGGCCCCGAGTTCCGGTGCAACCGAAGCAGT ACTGCCCGCCATGGTCGAAA
Downstream 100 bases:
>100_bases GCTCCGGTATCGCGCAGGACACCCAGCTGACCCGGCGGGAGCCGCGCATCGTCGCGCTCGGTGGCGGGCACGGCCTCTAC GCGACGTTGTCGGCGGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MESMTLHPPSETANADIDVVLVTGLSGAGRGTTAKVLEDLGWYVADNLPPELITRMVDLGLAAGSRITQLAVVMDVRSRG FTGDLESVRADLATRGISPRVLFLEASDESLVRRYENNRRSHPLQGGQTLAEGIAAERALLSSIRASADLVIDTSSLPVP ALRAAIERAFSSESVAHISVTVESFGFKYGLPMDADMVVDVRFLPNPHWVDELRPHTGQHPSVSHYVLSQPGADEFLDTY HRLLNLVIDGYRREGKRYMTIAVGCTGGKHRSVAITEALAASLAPDDDLSVRVLHRDLGRE
Sequences:
>Translated_301_residues MESMTLHPPSETANADIDVVLVTGLSGAGRGTTAKVLEDLGWYVADNLPPELITRMVDLGLAAGSRITQLAVVMDVRSRG FTGDLESVRADLATRGISPRVLFLEASDESLVRRYENNRRSHPLQGGQTLAEGIAAERALLSSIRASADLVIDTSSLPVP ALRAAIERAFSSESVAHISVTVESFGFKYGLPMDADMVVDVRFLPNPHWVDELRPHTGQHPSVSHYVLSQPGADEFLDTY HRLLNLVIDGYRREGKRYMTIAVGCTGGKHRSVAITEALAASLAPDDDLSVRVLHRDLGRE >Mature_301_residues MESMTLHPPSETANADIDVVLVTGLSGAGRGTTAKVLEDLGWYVADNLPPELITRMVDLGLAAGSRITQLAVVMDVRSRG FTGDLESVRADLATRGISPRVLFLEASDESLVRRYENNRRSHPLQGGQTLAEGIAAERALLSSIRASADLVIDTSSLPVP ALRAAIERAFSSESVAHISVTVESFGFKYGLPMDADMVVDVRFLPNPHWVDELRPHTGQHPSVSHYVLSQPGADEFLDTY HRLLNLVIDGYRREGKRYMTIAVGCTGGKHRSVAITEALAASLAPDDDLSVRVLHRDLGRE
Specific function: Displays ATPase and GTPase activities
COG id: COG1660
COG function: function code R; Predicted P-loop-containing kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0042 family
Homologues:
Organism=Escherichia coli, GI1789598, Length=264, Percent_Identity=38.2575757575758, Blast_Score=183, Evalue=1e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2783_MYCA9 (B1MC91)
Other databases:
- EMBL: CU458896 - RefSeq: YP_001703516.1 - ProteinModelPortal: B1MC91 - SMR: B1MC91 - EnsemblBacteria: EBMYCT00000004431 - GeneID: 5965291 - GenomeReviews: CU458896_GR - KEGG: mab:MAB_2783c - GeneTree: EBGT00050000017705 - HOGENOM: HBG289732 - OMA: GIGCTGG - ProtClustDB: PRK05416 - BioCyc: MABS561007:MAB_2783C-MONOMER - HAMAP: MF_00636 - InterPro: IPR005337 - PIRSF: PIRSF005052
Pfam domain/function: PF03668 ATP_bind_2
EC number: NA
Molecular weight: Translated: 32689; Mature: 32689
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESMTLHPPSETANADIDVVLVTGLSGAGRGTTAKVLEDLGWYVADNLPPELITRMVDLG CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCHHHCCCCCHHHHHHHHHHH LAAGSRITQLAVVMDVRSRGFTGDLESVRADLATRGISPRVLFLEASDESLVRRYENNRR HCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCC SHPLQGGQTLAEGIAAERALLSSIRASADLVIDTSSLPVPALRAAIERAFSSESVAHISV CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEE TVESFGFKYGLPMDADMVVDVRFLPNPHWVDELRPHTGQHPSVSHYVLSQPGADEFLDTY EEECCCEEECCCCCCCEEEEEEECCCCCCHHHCCCCCCCCCCCCEEEECCCCHHHHHHHH HRLLNLVIDGYRREGKRYMTIAVGCTGGKHRSVAITEALAASLAPDDDLSVRVLHRDLGR HHHHHHHHHHHHHCCCEEEEEEEECCCCCCCEEHHHHHHHHHCCCCCCCEEEEEEHHCCC E C >Mature Secondary Structure MESMTLHPPSETANADIDVVLVTGLSGAGRGTTAKVLEDLGWYVADNLPPELITRMVDLG CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCHHHCCCCCHHHHHHHHHHH LAAGSRITQLAVVMDVRSRGFTGDLESVRADLATRGISPRVLFLEASDESLVRRYENNRR HCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCC SHPLQGGQTLAEGIAAERALLSSIRASADLVIDTSSLPVPALRAAIERAFSSESVAHISV CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEE TVESFGFKYGLPMDADMVVDVRFLPNPHWVDELRPHTGQHPSVSHYVLSQPGADEFLDTY EEECCCEEECCCCCCCEEEEEEECCCCCCHHHCCCCCCCCCCCCEEEECCCCHHHHHHHH HRLLNLVIDGYRREGKRYMTIAVGCTGGKHRSVAITEALAASLAPDDDLSVRVLHRDLGR HHHHHHHHHHHHHCCCEEEEEEEECCCCCCCEEHHHHHHHHHCCCCCCCEEEEEEHHCCC E C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA