| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is tkt [H]
Identifier: 169629843
GI number: 169629843
Start: 2805984
End: 2808113
Strand: Direct
Name: tkt [H]
Synonym: MAB_2759
Alternate gene names: 169629843
Gene position: 2805984-2808113 (Clockwise)
Preceding gene: 169629841
Following gene: 169629844
Centisome position: 55.38
GC content: 66.24
Gene sequence:
>2130_bases GTGACCGCGATCTCACGTGAACTGGCGGAAGTCCCGACCGATATTCCAACCCTGACCCGGGTCGACCACCCGGATGACTG GACCGAGCTGGACTCACGCGCGGTGGACACCGTGCGGGTGTTGGCCGCTGACGCGGTGCAGAAGGTTGGCAATGGCCACC CTGGCACTGCGATGAGCCTGGCGCCCGTGGCGTACACGCTTTTTCAGCGTCAGTTGCGCCACGATCCCAGCGACACCACC TGGATCGGCCGCGACCGGTTCGTGCTGTCCTGCGGGCACAGCAGCCTGACTTTGTACTTGCAGCTCTACTTAGGCGGGTT TGGCCTGGAGCTCTCCGATATCGAAGCGCTACGCACCTGGGGCTCCCTGACTCCCGGGCACCCCGAGTACCACCACACCA AGGGTGTGGAGATCACCACCGGGCCGCTGGGCCAGGGCTTGGCCTCCGCGGTCGGCATGGCGATGGCCTCCCGATACGAG CGTGGCTTGTTCGATCCGGACGCCGCCCCCGGTACCAGCCCGTTCGATCACTTCATCTACGTCATCGCCTCCGACGGGGA TATCGAAGAGGGCGTGACTTCGGAGGCCTCGTCGTTGGCGGGCACTCAGCAGCTCGGAAACCTCATCGTCATCTGGGATG ACAATGAGATCTCCATTGAGCACGACACCAAGATCGCACTCTCGGAGGACACCCCCGCCCGCTACGAGGCGTACGGCTGG CATGTACAGACCGTCGTCAGTGGTGAGAACGTCACCGGCCTTGAAGAAGCACTGGCCAACGCCCGTGCGGTCACCGACCG CCCGTCGTTCATCGCGCTGCGCACGATCATCGGTTACCCCGCTCCCACCAAGATGAACACCGGCGGTGTGCACGGCTCGG CCCTGGGCGCTGACGAGGTGGCCGCCACCAAAAAGATTTTGGGCTTCGACCCGGATAAATCCTTCGAGGTGGCCCCCGAG GTCATCGCGCACACGCGCGAACTGGTGACGCGCGGTAAGCAGGCGCATGCCGAGTGGGACAAGAGCTTTGAGGCCTGGGC GGCCCGTGAGCCCGAGCGCAAGGCGCTGCTGGACCGCCTCCAGGCGCGTGCGTTGCCGCAGGGCTGGGACGCCGGGCTGC CGTCCTGGGAGCCCGGTTCCAAGGCGGTGGCCACCCGCGCCGCCTCCGGCGACACGCTTTCGGCGCTCGGGGCCAAGCTG CCCGAGCTGTGGGGCGGCTCGGCGGATCTGGCGGGCAGCAACAACACCACCATCAAGGGCGCCGATTCCTTTGGCCCGAC CTCCATCGCGACGTCCGACTGGAATGCCCAACCCTATGGCCGCACACTGCATTTCGGCATCCGCGAGCACGCGATGGGTT CCATCTTGTCCGGCATCGTGCTGCACGGACCCACCCGCGCGTACGGCGGAACGTTCCTGCAGTTCGCCGACTACATGCGC CCCGCGGTGCGTCTGGCCGCGCTGATGAACATCGACCCGATCTACGTCTGGACACATGACTCGATCGGTCTGGGCGAGGA CGGGCCCACCCACCAGCCGGTGGAACACCTGGCCGCCCTACGCGCCATCCCCAACCTCTCGGTGGTGCGCCCCGGCGACG CCAACGAAACCGCGTACGCCTGGGCGACCGTCCTGGAGCGCCAATCCAGCACCGGCCCCGTCGGTTTGGCACTCACCCGC CAGGGTGTGCCGATCCTGGAAGGCACCAGCCGCGAAGGCGTGGCCAAGGGCGGCTACGTGCTGGAGGCAGCCAGTGACAA TCCGGCGGACGCTCCCGATGTGATCCTCATCGGCACGGGCTCGGAACTGCAGCTCGCCGTCGAGGCCAAGAAGATTCTTG CCGCCAAGGGAATTGCGGCCTCCGTGGTGTCGTTGCCCTGTGTGGAATGGTTCGAATCCCAGCCCCAGGAATATCGCGAC AGCGTGCTGCCGCCGTCCGTACGCGCGCGTGTGGTGGTGGAAGCCGGCATCGCGCAGGGCTGGTACAAGTTCGTCGGCGA TGCGGGGCAGATCGTCTCCCTGGAGCATTTCGGAGCTTCGGCCGACGACAAGACGTTGTTCCGCGAGTTCGGCTTCACCC CTGACGCAGTGGCCGCAGCGGCCGAAAGGTCAATCGCAGCAGCTCAATAA
Upstream 100 bases:
>100_bases GTGAACACCGGTTGTCTGTCACTGGACTATCACATTGCTCGCACGGCGTGACCCGGCCTTGAGGCAGCGGCATGAAATCG TCAGCACTACGATGGGGCCC
Downstream 100 bases:
>100_bases CCCCGAATCAGGAAGGGATGAATCCCATGAGCACATCTGATCAGAACGCTAATCTCGCCGAACTGAGCGAGGCCGGAGTC GCTGTCTGGCTCGATGATCT
Product: transketolase
Products: NA
Alternate protein names: TK [H]
Number of amino acids: Translated: 709; Mature: 708
Protein sequence:
>709_residues MTAISRELAEVPTDIPTLTRVDHPDDWTELDSRAVDTVRVLAADAVQKVGNGHPGTAMSLAPVAYTLFQRQLRHDPSDTT WIGRDRFVLSCGHSSLTLYLQLYLGGFGLELSDIEALRTWGSLTPGHPEYHHTKGVEITTGPLGQGLASAVGMAMASRYE RGLFDPDAAPGTSPFDHFIYVIASDGDIEEGVTSEASSLAGTQQLGNLIVIWDDNEISIEHDTKIALSEDTPARYEAYGW HVQTVVSGENVTGLEEALANARAVTDRPSFIALRTIIGYPAPTKMNTGGVHGSALGADEVAATKKILGFDPDKSFEVAPE VIAHTRELVTRGKQAHAEWDKSFEAWAAREPERKALLDRLQARALPQGWDAGLPSWEPGSKAVATRAASGDTLSALGAKL PELWGGSADLAGSNNTTIKGADSFGPTSIATSDWNAQPYGRTLHFGIREHAMGSILSGIVLHGPTRAYGGTFLQFADYMR PAVRLAALMNIDPIYVWTHDSIGLGEDGPTHQPVEHLAALRAIPNLSVVRPGDANETAYAWATVLERQSSTGPVGLALTR QGVPILEGTSREGVAKGGYVLEAASDNPADAPDVILIGTGSELQLAVEAKKILAAKGIAASVVSLPCVEWFESQPQEYRD SVLPPSVRARVVVEAGIAQGWYKFVGDAGQIVSLEHFGASADDKTLFREFGFTPDAVAAAAERSIAAAQ
Sequences:
>Translated_709_residues MTAISRELAEVPTDIPTLTRVDHPDDWTELDSRAVDTVRVLAADAVQKVGNGHPGTAMSLAPVAYTLFQRQLRHDPSDTT WIGRDRFVLSCGHSSLTLYLQLYLGGFGLELSDIEALRTWGSLTPGHPEYHHTKGVEITTGPLGQGLASAVGMAMASRYE RGLFDPDAAPGTSPFDHFIYVIASDGDIEEGVTSEASSLAGTQQLGNLIVIWDDNEISIEHDTKIALSEDTPARYEAYGW HVQTVVSGENVTGLEEALANARAVTDRPSFIALRTIIGYPAPTKMNTGGVHGSALGADEVAATKKILGFDPDKSFEVAPE VIAHTRELVTRGKQAHAEWDKSFEAWAAREPERKALLDRLQARALPQGWDAGLPSWEPGSKAVATRAASGDTLSALGAKL PELWGGSADLAGSNNTTIKGADSFGPTSIATSDWNAQPYGRTLHFGIREHAMGSILSGIVLHGPTRAYGGTFLQFADYMR PAVRLAALMNIDPIYVWTHDSIGLGEDGPTHQPVEHLAALRAIPNLSVVRPGDANETAYAWATVLERQSSTGPVGLALTR QGVPILEGTSREGVAKGGYVLEAASDNPADAPDVILIGTGSELQLAVEAKKILAAKGIAASVVSLPCVEWFESQPQEYRD SVLPPSVRARVVVEAGIAQGWYKFVGDAGQIVSLEHFGASADDKTLFREFGFTPDAVAAAAERSIAAAQ >Mature_708_residues TAISRELAEVPTDIPTLTRVDHPDDWTELDSRAVDTVRVLAADAVQKVGNGHPGTAMSLAPVAYTLFQRQLRHDPSDTTW IGRDRFVLSCGHSSLTLYLQLYLGGFGLELSDIEALRTWGSLTPGHPEYHHTKGVEITTGPLGQGLASAVGMAMASRYER GLFDPDAAPGTSPFDHFIYVIASDGDIEEGVTSEASSLAGTQQLGNLIVIWDDNEISIEHDTKIALSEDTPARYEAYGWH VQTVVSGENVTGLEEALANARAVTDRPSFIALRTIIGYPAPTKMNTGGVHGSALGADEVAATKKILGFDPDKSFEVAPEV IAHTRELVTRGKQAHAEWDKSFEAWAAREPERKALLDRLQARALPQGWDAGLPSWEPGSKAVATRAASGDTLSALGAKLP ELWGGSADLAGSNNTTIKGADSFGPTSIATSDWNAQPYGRTLHFGIREHAMGSILSGIVLHGPTRAYGGTFLQFADYMRP AVRLAALMNIDPIYVWTHDSIGLGEDGPTHQPVEHLAALRAIPNLSVVRPGDANETAYAWATVLERQSSTGPVGLALTRQ GVPILEGTSREGVAKGGYVLEAASDNPADAPDVILIGTGSELQLAVEAKKILAAKGIAASVVSLPCVEWFESQPQEYRDS VLPPSVRARVVVEAGIAQGWYKFVGDAGQIVSLEHFGASADDKTLFREFGFTPDAVAAAAERSIAAAQ
Specific function: Unknown
COG id: COG0021
COG function: function code G; Transketolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transketolase family [H]
Homologues:
Organism=Homo sapiens, GI205277463, Length=710, Percent_Identity=25.6338028169014, Blast_Score=144, Evalue=3e-34, Organism=Homo sapiens, GI4507521, Length=710, Percent_Identity=25.6338028169014, Blast_Score=144, Evalue=3e-34, Organism=Homo sapiens, GI133778974, Length=606, Percent_Identity=23.9273927392739, Blast_Score=110, Evalue=5e-24, Organism=Homo sapiens, GI225637459, Length=604, Percent_Identity=22.3509933774834, Blast_Score=100, Evalue=6e-21, Organism=Homo sapiens, GI225637461, Length=506, Percent_Identity=23.5177865612648, Blast_Score=97, Evalue=4e-20, Organism=Homo sapiens, GI225637463, Length=506, Percent_Identity=23.7154150197628, Blast_Score=97, Evalue=4e-20, Organism=Escherichia coli, GI48994911, Length=673, Percent_Identity=43.8335809806835, Blast_Score=530, Evalue=1e-151, Organism=Escherichia coli, GI1788808, Length=676, Percent_Identity=43.6390532544379, Blast_Score=527, Evalue=1e-150, Organism=Caenorhabditis elegans, GI17539652, Length=595, Percent_Identity=25.8823529411765, Blast_Score=140, Evalue=3e-33, Organism=Saccharomyces cerevisiae, GI6325331, Length=683, Percent_Identity=45.8272327964861, Blast_Score=556, Evalue=1e-159, Organism=Saccharomyces cerevisiae, GI6319593, Length=683, Percent_Identity=44.5095168374817, Blast_Score=533, Evalue=1e-152, Organism=Drosophila melanogaster, GI45551847, Length=596, Percent_Identity=25.503355704698, Blast_Score=145, Evalue=7e-35, Organism=Drosophila melanogaster, GI45550715, Length=596, Percent_Identity=25.503355704698, Blast_Score=145, Evalue=7e-35, Organism=Drosophila melanogaster, GI24645119, Length=568, Percent_Identity=25.3521126760563, Blast_Score=130, Evalue=3e-30, Organism=Drosophila melanogaster, GI24666278, Length=607, Percent_Identity=25.3706754530478, Blast_Score=124, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005475 - InterPro: IPR005478 - InterPro: IPR020826 - InterPro: IPR005476 - InterPro: IPR005474 [H]
Pfam domain/function: PF02779 Transket_pyr; PF02780 Transketolase_C; PF00456 Transketolase_N [H]
EC number: =2.2.1.1 [H]
Molecular weight: Translated: 75558; Mature: 75427
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS00801 TRANSKETOLASE_1 ; PS00802 TRANSKETOLASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAISRELAEVPTDIPTLTRVDHPDDWTELDSRAVDTVRVLAADAVQKVGNGHPGTAMSL CCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH APVAYTLFQRQLRHDPSDTTWIGRDRFVLSCGHSSLTLYLQLYLGGFGLELSDIEALRTW HHHHHHHHHHHHHCCCCCCEEECCCCEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHH GSLTPGHPEYHHTKGVEITTGPLGQGLASAVGMAMASRYERGLFDPDAAPGTSPFDHFIY CCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEE VIASDGDIEEGVTSEASSLAGTQQLGNLIVIWDDNEISIEHDTKIALSEDTPARYEAYGW EEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCEEEEECCCEEEECCCCCCCEEEECE HVQTVVSGENVTGLEEALANARAVTDRPSFIALRTIIGYPAPTKMNTGGVHGSALGADEV EEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEHHHHHCCCCCCCCCCCCCCCCCCCHHHH AATKKILGFDPDKSFEVAPEVIAHTRELVTRGKQAHAEWDKSFEAWAAREPERKALLDRL HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH QARALPQGWDAGLPSWEPGSKAVATRAASGDTLSALGAKLPELWGGSADLAGSNNTTIKG HHHCCCCCCCCCCCCCCCCCHHHHEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEE ADSFGPTSIATSDWNAQPYGRTLHFGIREHAMGSILSGIVLHGPTRAYGGTFLQFADYMR CCCCCCCCEECCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHH PAVRLAALMNIDPIYVWTHDSIGLGEDGPTHQPVEHLAALRAIPNLSVVRPGDANETAYA HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCHHHH WATVLERQSSTGPVGLALTRQGVPILEGTSREGVAKGGYVLEAASDNPADAPDVILIGTG HHHHHHHCCCCCCEEEEEECCCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCEEEEECC SELQLAVEAKKILAAKGIAASVVSLPCVEWFESQPQEYRDSVLPPSVRARVVVEAGIAQG CCEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHEEEEEEHHHHHH WYKFVGDAGQIVSLEHFGASADDKTLFREFGFTPDAVAAAAERSIAAAQ HHHHHCCCCCEEEEHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure TAISRELAEVPTDIPTLTRVDHPDDWTELDSRAVDTVRVLAADAVQKVGNGHPGTAMSL CCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH APVAYTLFQRQLRHDPSDTTWIGRDRFVLSCGHSSLTLYLQLYLGGFGLELSDIEALRTW HHHHHHHHHHHHHCCCCCCEEECCCCEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHH GSLTPGHPEYHHTKGVEITTGPLGQGLASAVGMAMASRYERGLFDPDAAPGTSPFDHFIY CCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEE VIASDGDIEEGVTSEASSLAGTQQLGNLIVIWDDNEISIEHDTKIALSEDTPARYEAYGW EEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCEEEEECCCEEEECCCCCCCEEEECE HVQTVVSGENVTGLEEALANARAVTDRPSFIALRTIIGYPAPTKMNTGGVHGSALGADEV EEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEHHHHHCCCCCCCCCCCCCCCCCCCHHHH AATKKILGFDPDKSFEVAPEVIAHTRELVTRGKQAHAEWDKSFEAWAAREPERKALLDRL HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH QARALPQGWDAGLPSWEPGSKAVATRAASGDTLSALGAKLPELWGGSADLAGSNNTTIKG HHHCCCCCCCCCCCCCCCCCHHHHEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEE ADSFGPTSIATSDWNAQPYGRTLHFGIREHAMGSILSGIVLHGPTRAYGGTFLQFADYMR CCCCCCCCEECCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHH PAVRLAALMNIDPIYVWTHDSIGLGEDGPTHQPVEHLAALRAIPNLSVVRPGDANETAYA HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCHHHH WATVLERQSSTGPVGLALTRQGVPILEGTSREGVAKGGYVLEAASDNPADAPDVILIGTG HHHHHHHCCCCCCEEEEEECCCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCEEEEECC SELQLAVEAKKILAAKGIAASVVSLPCVEWFESQPQEYRDSVLPPSVRARVVVEAGIAQG CCEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHEEEEEEHHHHHH WYKFVGDAGQIVSLEHFGASADDKTLFREFGFTPDAVAAAAERSIAAAQ HHHHHCCCCCEEEEHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]