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The map label for this gene is nifU [H]

Identifier: 169629829

GI number: 169629829

Start: 2791994

End: 2792446

Strand: Reverse

Name: nifU [H]

Synonym: MAB_2745c

Alternate gene names: 169629829

Gene position: 2792446-2791994 (Counterclockwise)

Preceding gene: 169629830

Following gene: 169629828

Centisome position: 55.11

GC content: 60.26

Gene sequence:

>453_bases
ATGCGTCTGGAGCAGATGTACCAGGAAGTCATCCTGGATCACTACAAGCATCCGCACCATCGCGGGCTGCGTGAGCCGTT
CGCGGCCGAGGTACACCATGTGAATCCCACCTGCGGCGACGAGGTGACGCTGCGGGTCTTTGTGCAGGACAACAAGATCG
CCGACGTGTCCTATGACGGTCAGGGTTGCTCGATCAGCCAGGCCGCCACGTCGGTGCTGACCGATCAGGTGATCGGGTTG
ACAGTGGACGAGGCACTGAAAACGGTGGCCTCATTCAACGAGATGATCTCGTCGCGCGGGACCATCGACGGCGACGAGGA
CGTCATCGGCGATGGCATTGCCTTCGCCGGTGTTTCGCGCTATCCGGCCCGCGTCAAGTGCGCGCTCCTAGGATGGATGG
CGTTCAAGGATGCGTTGGTACAGGCAATAGAACATCACGAGGTGAAGCGATGA

Upstream 100 bases:

>100_bases
TAGCGGCCAGCGCCCGCGCATCTTTCGCGGTGTACAACACCCTGGACGAGGTCGATCGGCTGACCGCCGGTGTTCGCCGC
GCACAGGAGTTCTTTTCATA

Downstream 100 bases:

>100_bases
CCGAGGTATCAGAGGAAGTAAAGCTTCTCGAAGATGTCGAGGAGGCGATGCGCGATGTCGTCGACCCAGAGCTCGGTATC
AACGTGGTCGATCTGGGCCT

Product: SUF system FeS assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MRLEQMYQEVILDHYKHPHHRGLREPFAAEVHHVNPTCGDEVTLRVFVQDNKIADVSYDGQGCSISQAATSVLTDQVIGL
TVDEALKTVASFNEMISSRGTIDGDEDVIGDGIAFAGVSRYPARVKCALLGWMAFKDALVQAIEHHEVKR

Sequences:

>Translated_150_residues
MRLEQMYQEVILDHYKHPHHRGLREPFAAEVHHVNPTCGDEVTLRVFVQDNKIADVSYDGQGCSISQAATSVLTDQVIGL
TVDEALKTVASFNEMISSRGTIDGDEDVIGDGIAFAGVSRYPARVKCALLGWMAFKDALVQAIEHHEVKR
>Mature_150_residues
MRLEQMYQEVILDHYKHPHHRGLREPFAAEVHHVNPTCGDEVTLRVFVQDNKIADVSYDGQGCSISQAATSVLTDQVIGL
TVDEALKTVASFNEMISSRGTIDGDEDVIGDGIAFAGVSRYPARVKCALLGWMAFKDALVQAIEHHEVKR

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (Potential) [H]

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002871
- InterPro:   IPR011341 [H]

Pfam domain/function: PF01592 NifU_N [H]

EC number: NA

Molecular weight: Translated: 16606; Mature: 16606

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLEQMYQEVILDHYKHPHHRGLREPFAAEVHHVNPTCGDEVTLRVFVQDNKIADVSYDG
CCHHHHHHHHHHHHCCCCHHCCCCCCHHHHHCCCCCCCCCCEEEEEEEECCEEEEEEECC
QGCSISQAATSVLTDQVIGLTVDEALKTVASFNEMISSRGTIDGDEDVIGDGIAFAGVSR
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHCCCCC
YPARVKCALLGWMAFKDALVQAIEHHEVKR
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRLEQMYQEVILDHYKHPHHRGLREPFAAEVHHVNPTCGDEVTLRVFVQDNKIADVSYDG
CCHHHHHHHHHHHHCCCCHHCCCCCCHHHHHCCCCCCCCCCEEEEEEEECCEEEEEEECC
QGCSISQAATSVLTDQVIGLTVDEALKTVASFNEMISSRGTIDGDEDVIGDGIAFAGVSR
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHCCCCC
YPARVKCALLGWMAFKDALVQAIEHHEVKR
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]