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The map label for this gene is ydiF [H]

Identifier: 169629820

GI number: 169629820

Start: 2784589

End: 2786217

Strand: Reverse

Name: ydiF [H]

Synonym: MAB_2736c

Alternate gene names: 169629820

Gene position: 2786217-2784589 (Counterclockwise)

Preceding gene: 169629821

Following gene: 169629819

Centisome position: 54.99

GC content: 65.38

Gene sequence:

>1629_bases
GTGATTACCGCGACGGACCTCGAGGTCCGCGCCGGCGCCCGCACGCTCGTCTACGCGCCGGGCCCCGCGTTACGTATTCA
GCCCGGTGACCGCATCGGTCTGGTGGGCCGTAACGGGGCCGGCAAGACCACCTCGATGAGAATTCTGGCCGGCGAGGGTG
AACCATACGCCGGCTCGGTGTCCCGGATTGGCGAAATTGGTTATCTGCCACAGGATCCCAAAGAGGGAAATTTGGATCTG
CTGGCTCGTGACCGGGTGCTGTCGGCGCGCGGCCTGGACACCATCATCAGCGAGATGGAAAAGCAGCAGACACTGATGGC
CGAGCTGGCCGACGACGACCAGCGCGATAAAGCGGTGCGCCGCTACGGGCAGTTGGAGGAGCGTTTCTCCTCGCTGGGCG
GATATGTCGCCGAGAGTGAAGCCGCCCGGATCTGCTCGAGTCTCGGGTTGCCCGAGCGGATTCTGGTTCAACCGCTGCGG
ACGCTTTCCGGCGGGCAACGCCGCCGTGTCGAGCTCGCGCGGATCCTCTTCGGTGCGTCCGAAGGCGGCGCGGGCTCGAG
CATGACACTGCTGCTCGATGAGCCGACCAACCACCTGGACGCGGACTCGATCGGCTGGTTGCGTAGCTTTCTGCAAAATC
ACGATGGCGGGCTGGTGGTGATCAGTCACAACGTCGAGCTGCTCGCGGACGTCGTCAACAAGGTGTGGTTCCTGGACGCG
GTACGCGGCGAGGTCGACGTTTACAACATGGGTTGGCAGAAGTATCTGGACGCGCGGTCGCTGGATGAACAGCGCCGCCG
CCGGGAGCGCGCCAACGCGGAGAAGAAGGCGTCAGCCCTGCGCACCCAGGCGGCCAAGATGGGCGCTAAGGCCACCAAAG
CCGTTGCCGCGCAGAATATGTTGCGCCGCGCCGAGAAGATGTTGTCGGGGCTCGACGAGGAACGGGTGGCCGACAAGGTG
GCCCGCATCAAGTTCCCCACTCCGGCCGCGTGTGGGCGGGTGCCGTTGGTGGCCAAGGGGCTGACCAAGAACTACGGGTC
GCTGGAGATCTTCACCGGGGTGGATCTGGCCATCGATCGTGGTTCCCGGGTCGTGGTCTTGGGACTCAACGGCGCCGGCA
AGACGACGCTGCTGAGGCTGCTGGCGGGCGTGGAGACCGCCGACGCCGGCGAGTTGGAACCGGGGCACGGTCTCAAACTC
GGATATTTCGCGCAGGAACACGACACCCTGGACGATCACGCGACAGTCTGGGAGAACATCCGTCACGCCGCTCCGGATAC
GGGAGAGCAGGAGCTGCGCGGAATCCTGGGCGCGTTCATGTTCAGTGGTCCCCAGCTGGAGCAGCTGGCGGGCACGCTGT
CCGGCGGTGAGAAGACCCGGCTGGCTCTGGCCGGACTGGTGGCCTCGACGGCGAATGTGTTGCTGCTCGACGAGCCGACC
AACAACTTGGACCCGGCCTCGCGTGAGCAGGTTCTGGACGCGCTGCGCAGTTACCTCGGTGCGGTTGTGCTGGTGACGCA
TGACCCCGGAGCCGCCGAGGCACTGAACCCGCAACGCGTAGTGTTGTTGCCGGATGGCACCGAGGACTACTGGTCGGACG
AGTATCGGGACCTCATCGAGCTGGCCTAA

Upstream 100 bases:

>100_bases
CGAAGAAGCCACCGCCGCGCGCAAGGAGAAGCGGCCGGCGGAATTCAGAGACAAGCGCTGAGACGTGCCCGGCACGCACC
CAGCATCCAAGGAGTAAGTA

Downstream 100 bases:

>100_bases
CCTATTTCTTTCCCCTCCTACCGCGTCTCGTGCACATGCGTGATCACATTTGCGCTATGGTGCAACCGGGTCGAGCTGCC
CAGCAGGGCTGTGGAATGGA

Product: macrolide ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 542; Mature: 542

Protein sequence:

>542_residues
MITATDLEVRAGARTLVYAPGPALRIQPGDRIGLVGRNGAGKTTSMRILAGEGEPYAGSVSRIGEIGYLPQDPKEGNLDL
LARDRVLSARGLDTIISEMEKQQTLMAELADDDQRDKAVRRYGQLEERFSSLGGYVAESEAARICSSLGLPERILVQPLR
TLSGGQRRRVELARILFGASEGGAGSSMTLLLDEPTNHLDADSIGWLRSFLQNHDGGLVVISHNVELLADVVNKVWFLDA
VRGEVDVYNMGWQKYLDARSLDEQRRRRERANAEKKASALRTQAAKMGAKATKAVAAQNMLRRAEKMLSGLDEERVADKV
ARIKFPTPAACGRVPLVAKGLTKNYGSLEIFTGVDLAIDRGSRVVVLGLNGAGKTTLLRLLAGVETADAGELEPGHGLKL
GYFAQEHDTLDDHATVWENIRHAAPDTGEQELRGILGAFMFSGPQLEQLAGTLSGGEKTRLALAGLVASTANVLLLDEPT
NNLDPASREQVLDALRSYLGAVVLVTHDPGAAEALNPQRVVLLPDGTEDYWSDEYRDLIELA

Sequences:

>Translated_542_residues
MITATDLEVRAGARTLVYAPGPALRIQPGDRIGLVGRNGAGKTTSMRILAGEGEPYAGSVSRIGEIGYLPQDPKEGNLDL
LARDRVLSARGLDTIISEMEKQQTLMAELADDDQRDKAVRRYGQLEERFSSLGGYVAESEAARICSSLGLPERILVQPLR
TLSGGQRRRVELARILFGASEGGAGSSMTLLLDEPTNHLDADSIGWLRSFLQNHDGGLVVISHNVELLADVVNKVWFLDA
VRGEVDVYNMGWQKYLDARSLDEQRRRRERANAEKKASALRTQAAKMGAKATKAVAAQNMLRRAEKMLSGLDEERVADKV
ARIKFPTPAACGRVPLVAKGLTKNYGSLEIFTGVDLAIDRGSRVVVLGLNGAGKTTLLRLLAGVETADAGELEPGHGLKL
GYFAQEHDTLDDHATVWENIRHAAPDTGEQELRGILGAFMFSGPQLEQLAGTLSGGEKTRLALAGLVASTANVLLLDEPT
NNLDPASREQVLDALRSYLGAVVLVTHDPGAAEALNPQRVVLLPDGTEDYWSDEYRDLIELA
>Mature_542_residues
MITATDLEVRAGARTLVYAPGPALRIQPGDRIGLVGRNGAGKTTSMRILAGEGEPYAGSVSRIGEIGYLPQDPKEGNLDL
LARDRVLSARGLDTIISEMEKQQTLMAELADDDQRDKAVRRYGQLEERFSSLGGYVAESEAARICSSLGLPERILVQPLR
TLSGGQRRRVELARILFGASEGGAGSSMTLLLDEPTNHLDADSIGWLRSFLQNHDGGLVVISHNVELLADVVNKVWFLDA
VRGEVDVYNMGWQKYLDARSLDEQRRRRERANAEKKASALRTQAAKMGAKATKAVAAQNMLRRAEKMLSGLDEERVADKV
ARIKFPTPAACGRVPLVAKGLTKNYGSLEIFTGVDLAIDRGSRVVVLGLNGAGKTTLLRLLAGVETADAGELEPGHGLKL
GYFAQEHDTLDDHATVWENIRHAAPDTGEQELRGILGAFMFSGPQLEQLAGTLSGGEKTRLALAGLVASTANVLLLDEPT
NNLDPASREQVLDALRSYLGAVVLVTHDPGAAEALNPQRVVLLPDGTEDYWSDEYRDLIELA

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=510, Percent_Identity=30.7843137254902, Blast_Score=189, Evalue=4e-48,
Organism=Homo sapiens, GI27881506, Length=496, Percent_Identity=29.4354838709677, Blast_Score=178, Evalue=1e-44,
Organism=Homo sapiens, GI10947137, Length=496, Percent_Identity=29.4354838709677, Blast_Score=177, Evalue=2e-44,
Organism=Homo sapiens, GI10947135, Length=510, Percent_Identity=31.9607843137255, Blast_Score=165, Evalue=1e-40,
Organism=Homo sapiens, GI69354671, Length=510, Percent_Identity=31.9607843137255, Blast_Score=165, Evalue=1e-40,
Organism=Homo sapiens, GI116734710, Length=239, Percent_Identity=30.1255230125523, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI153792144, Length=198, Percent_Identity=31.3131313131313, Blast_Score=76, Evalue=9e-14,
Organism=Homo sapiens, GI27477115, Length=191, Percent_Identity=31.413612565445, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI27881501, Length=213, Percent_Identity=29.1079812206573, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI30795238, Length=213, Percent_Identity=29.1079812206573, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI31657092, Length=197, Percent_Identity=28.4263959390863, Blast_Score=67, Evalue=5e-11,
Organism=Homo sapiens, GI27436953, Length=190, Percent_Identity=28.4210526315789, Blast_Score=67, Evalue=6e-11,
Organism=Escherichia coli, GI1787041, Length=552, Percent_Identity=31.3405797101449, Blast_Score=234, Evalue=9e-63,
Organism=Escherichia coli, GI1789751, Length=515, Percent_Identity=31.8446601941748, Blast_Score=233, Evalue=3e-62,
Organism=Escherichia coli, GI2367384, Length=495, Percent_Identity=32.5252525252525, Blast_Score=218, Evalue=5e-58,
Organism=Escherichia coli, GI1787182, Length=502, Percent_Identity=30.8764940239044, Blast_Score=183, Evalue=3e-47,
Organism=Escherichia coli, GI1787370, Length=214, Percent_Identity=34.5794392523364, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1787792, Length=210, Percent_Identity=29.0476190476191, Blast_Score=83, Evalue=6e-17,
Organism=Escherichia coli, GI87081782, Length=543, Percent_Identity=26.5193370165746, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1787029, Length=213, Percent_Identity=29.5774647887324, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI1788761, Length=214, Percent_Identity=32.2429906542056, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1790467, Length=208, Percent_Identity=31.25, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1786703, Length=199, Percent_Identity=31.1557788944724, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI87081791, Length=210, Percent_Identity=32.3809523809524, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1787164, Length=208, Percent_Identity=33.1730769230769, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI87081709, Length=202, Percent_Identity=28.2178217821782, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1790544, Length=232, Percent_Identity=30.1724137931034, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1789672, Length=224, Percent_Identity=24.5535714285714, Blast_Score=69, Evalue=8e-13,
Organism=Escherichia coli, GI1788225, Length=200, Percent_Identity=28.5, Blast_Score=69, Evalue=9e-13,
Organism=Escherichia coli, GI1787758, Length=194, Percent_Identity=28.8659793814433, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1789873, Length=193, Percent_Identity=32.1243523316062, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1786253, Length=155, Percent_Identity=34.1935483870968, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1787105, Length=206, Percent_Identity=31.5533980582524, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI48994943, Length=186, Percent_Identity=29.5698924731183, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1788165, Length=181, Percent_Identity=28.7292817679558, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1788053, Length=193, Percent_Identity=30.0518134715026, Blast_Score=63, Evalue=4e-11,
Organism=Escherichia coli, GI1788450, Length=210, Percent_Identity=30, Blast_Score=63, Evalue=5e-11,
Organism=Escherichia coli, GI87082268, Length=212, Percent_Identity=29.2452830188679, Blast_Score=62, Evalue=7e-11,
Organism=Escherichia coli, GI1789593, Length=195, Percent_Identity=27.6923076923077, Blast_Score=62, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17555318, Length=496, Percent_Identity=28.6290322580645, Blast_Score=181, Evalue=1e-45,
Organism=Caenorhabditis elegans, GI17559834, Length=504, Percent_Identity=28.3730158730159, Blast_Score=177, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI17553372, Length=526, Percent_Identity=29.467680608365, Blast_Score=172, Evalue=5e-43,
Organism=Caenorhabditis elegans, GI17565586, Length=213, Percent_Identity=27.2300469483568, Blast_Score=75, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI115533608, Length=245, Percent_Identity=27.3469387755102, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71983523, Length=229, Percent_Identity=28.3842794759825, Blast_Score=67, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71983516, Length=229, Percent_Identity=28.3842794759825, Blast_Score=67, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71983510, Length=229, Percent_Identity=28.3842794759825, Blast_Score=67, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=500, Percent_Identity=29.8, Blast_Score=182, Evalue=2e-46,
Organism=Saccharomyces cerevisiae, GI6321121, Length=539, Percent_Identity=28.9424860853432, Blast_Score=181, Evalue=3e-46,
Organism=Saccharomyces cerevisiae, GI6324314, Length=173, Percent_Identity=34.1040462427746, Blast_Score=75, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6323278, Length=93, Percent_Identity=38.7096774193548, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24666836, Length=494, Percent_Identity=31.9838056680162, Blast_Score=201, Evalue=1e-51,
Organism=Drosophila melanogaster, GI24642252, Length=497, Percent_Identity=29.7786720321932, Blast_Score=198, Evalue=7e-51,
Organism=Drosophila melanogaster, GI18859989, Length=497, Percent_Identity=29.7786720321932, Blast_Score=198, Evalue=7e-51,
Organism=Drosophila melanogaster, GI24641342, Length=512, Percent_Identity=31.640625, Blast_Score=191, Evalue=8e-49,
Organism=Drosophila melanogaster, GI24666092, Length=213, Percent_Identity=30.9859154929577, Blast_Score=73, Evalue=6e-13,
Organism=Drosophila melanogaster, GI221512771, Length=215, Percent_Identity=29.3023255813954, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI116007184, Length=183, Percent_Identity=31.6939890710383, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI221500365, Length=183, Percent_Identity=31.6939890710383, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24582014, Length=189, Percent_Identity=32.2751322751323, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24582012, Length=189, Percent_Identity=32.2751322751323, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24643674, Length=233, Percent_Identity=29.6137339055794, Blast_Score=70, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 58613; Mature: 58613

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITATDLEVRAGARTLVYAPGPALRIQPGDRIGLVGRNGAGKTTSMRILAGEGEPYAGSV
CCCCCCEEEECCCEEEEECCCCEEEECCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCH
SRIGEIGYLPQDPKEGNLDLLARDRVLSARGLDTIISEMEKQQTLMAELADDDQRDKAVR
HHHHHCCCCCCCCCCCCEEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
RYGQLEERFSSLGGYVAESEAARICSSLGLPERILVQPLRTLSGGQRRRVELARILFGAS
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
EGGAGSSMTLLLDEPTNHLDADSIGWLRSFLQNHDGGLVVISHNVELLADVVNKVWFLDA
CCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHH
VRGEVDVYNMGWQKYLDARSLDEQRRRRERANAEKKASALRTQAAKMGAKATKAVAAQNM
HCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHH
LRRAEKMLSGLDEERVADKVARIKFPTPAACGRVPLVAKGLTKNYGSLEIFTGVDLAIDR
HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCEEEEECCEEEEEC
GSRVVVLGLNGAGKTTLLRLLAGVETADAGELEPGHGLKLGYFAQEHDTLDDHATVWENI
CCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHH
RHAAPDTGEQELRGILGAFMFSGPQLEQLAGTLSGGEKTRLALAGLVASTANVLLLDEPT
HHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCC
NNLDPASREQVLDALRSYLGAVVLVTHDPGAAEALNPQRVVLLPDGTEDYWSDEYRDLIE
CCCCCCHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHH
LA
CC
>Mature Secondary Structure
MITATDLEVRAGARTLVYAPGPALRIQPGDRIGLVGRNGAGKTTSMRILAGEGEPYAGSV
CCCCCCEEEECCCEEEEECCCCEEEECCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCH
SRIGEIGYLPQDPKEGNLDLLARDRVLSARGLDTIISEMEKQQTLMAELADDDQRDKAVR
HHHHHCCCCCCCCCCCCEEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
RYGQLEERFSSLGGYVAESEAARICSSLGLPERILVQPLRTLSGGQRRRVELARILFGAS
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
EGGAGSSMTLLLDEPTNHLDADSIGWLRSFLQNHDGGLVVISHNVELLADVVNKVWFLDA
CCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHH
VRGEVDVYNMGWQKYLDARSLDEQRRRRERANAEKKASALRTQAAKMGAKATKAVAAQNM
HCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHH
LRRAEKMLSGLDEERVADKVARIKFPTPAACGRVPLVAKGLTKNYGSLEIFTGVDLAIDR
HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCEEEEECCEEEEEC
GSRVVVLGLNGAGKTTLLRLLAGVETADAGELEPGHGLKLGYFAQEHDTLDDHATVWENI
CCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHH
RHAAPDTGEQELRGILGAFMFSGPQLEQLAGTLSGGEKTRLALAGLVASTANVLLLDEPT
HHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCC
NNLDPASREQVLDALRSYLGAVVLVTHDPGAAEALNPQRVVLLPDGTEDYWSDEYRDLIE
CCCCCCHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHH
LA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]