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The map label for this gene is ybbK [C]

Identifier: 169629802

GI number: 169629802

Start: 2767152

End: 2768294

Strand: Reverse

Name: ybbK [C]

Synonym: MAB_2718c

Alternate gene names: 169629802

Gene position: 2768294-2767152 (Counterclockwise)

Preceding gene: 169629803

Following gene: 169629801

Centisome position: 54.63

GC content: 63.34

Gene sequence:

>1143_bases
ATGGGAGTAGCGGCCGGAGTGTTTGTGTTGATCGTCTTGATCATCCTGGGCGTCACCATCGTGCTGAAGTCCGTGGCGCT
CGTTCCGCAAGCCGAGGCCGCGGTGATCGAGCGGCTCGGGCGCTATTCGAAGACGGTGAGTGGGCAGCTCACCATCCTGG
TGCCGTTCGTGGACCGGATCCGGGCCAAGGTAGACCTGCGTGAACGCGTCGTGTCCTTCCCGCCGCAGCCGGTGATTACC
GAGGACAACCTGACGGTGAACATCGATACTGTCGTCTACTTCCAGGTCACCAACCCGCAGGCGGCGGTATACGAAATCAG
CAACTACATCGTGGGCGTCGAGCAGCTCACCACGACCACTCTGCGCAACGTGGTGGGCGGTATGACCCTGGAACAGACGC
TCACCTCGCGCGACCAGATCAACGGCCAGCTGCGTGGCGTGCTCGACGAGGCCACCGGGCGCTGGGGACTGCGCGTGGCC
CGGGTGGAACTGCGTTCTATCGACCCACCGCCGTCGGTGCAGGAGTCGATGGAAAAGCAGATGAAGGCCGACCGCGAGAA
GCGTGCGATGATCCTGAACGCCGAGGGTGTGCGTGAGGCCTCCATCAAGCAGGCGGAGGGCGCCAAGCAGTCGCAGATCC
TCGCGGCAGAGGGTGCCAAGCAGGCGGCGATTCTCTCGGCCGAGGCCGACCGGCAGTCGCGCATTCTGCGCGCCGAGGGT
GAACGTGCCGCACAGTATCTGCAGGCTCAGGGCCAGGCGAAGGCGATCGAAAAGGTTTTTGCCGCAGTGAAATCCGGTAA
ACCCACGCCAGAGTTGTTGGCCTACCAGTATTTACAGACGTTACCCAAGATGGCCGAGGGCGAGGCGAATAAGGTATGGC
TGATTCCAAGCGACTTCGGTTCGGCGCTACAAGGGTTTACAAAGTTGTTGGGTGCCCCTGGCGACGACGGAGTGTTCCGC
TACGAGCCGTCCCCGGTCGATACGTCCACGGAGCGTCCCGAGGATGACTCCGATGAGGTGGCGGGATGGTTCGACACCAA
GGCGACTCCCGAGGCGGCCGCGGCGGTCGCCGAGGCGCAGTCGGCCGCAAAGGAGATTGGTCAGATCGATCCGGTGAGCC
GGCATCAGTTGCCCGAGGTGTGA

Upstream 100 bases:

>100_bases
AAAGTCTGGGCGATTCGAGCAGGGCGAGACGGTCACAGTGGTTCAAATCGACGGCGCCACGGCGGTTGTCGAAAAGATCT
GAGAATAGGGGAGTACGGGT

Downstream 100 bases:

>100_bases
CGCGGATGTCGCTGGCTTGACAAGCCTATTTCAGCGGCCCATCATGGGTACCGGTTCAGCACCTTGCTAGGTGAGGCTCC
TACGTGAATACAGGCCACTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 379

Protein sequence:

>380_residues
MGVAAGVFVLIVLIILGVTIVLKSVALVPQAEAAVIERLGRYSKTVSGQLTILVPFVDRIRAKVDLRERVVSFPPQPVIT
EDNLTVNIDTVVYFQVTNPQAAVYEISNYIVGVEQLTTTTLRNVVGGMTLEQTLTSRDQINGQLRGVLDEATGRWGLRVA
RVELRSIDPPPSVQESMEKQMKADREKRAMILNAEGVREASIKQAEGAKQSQILAAEGAKQAAILSAEADRQSRILRAEG
ERAAQYLQAQGQAKAIEKVFAAVKSGKPTPELLAYQYLQTLPKMAEGEANKVWLIPSDFGSALQGFTKLLGAPGDDGVFR
YEPSPVDTSTERPEDDSDEVAGWFDTKATPEAAAAVAEAQSAAKEIGQIDPVSRHQLPEV

Sequences:

>Translated_380_residues
MGVAAGVFVLIVLIILGVTIVLKSVALVPQAEAAVIERLGRYSKTVSGQLTILVPFVDRIRAKVDLRERVVSFPPQPVIT
EDNLTVNIDTVVYFQVTNPQAAVYEISNYIVGVEQLTTTTLRNVVGGMTLEQTLTSRDQINGQLRGVLDEATGRWGLRVA
RVELRSIDPPPSVQESMEKQMKADREKRAMILNAEGVREASIKQAEGAKQSQILAAEGAKQAAILSAEADRQSRILRAEG
ERAAQYLQAQGQAKAIEKVFAAVKSGKPTPELLAYQYLQTLPKMAEGEANKVWLIPSDFGSALQGFTKLLGAPGDDGVFR
YEPSPVDTSTERPEDDSDEVAGWFDTKATPEAAAAVAEAQSAAKEIGQIDPVSRHQLPEV
>Mature_379_residues
GVAAGVFVLIVLIILGVTIVLKSVALVPQAEAAVIERLGRYSKTVSGQLTILVPFVDRIRAKVDLRERVVSFPPQPVITE
DNLTVNIDTVVYFQVTNPQAAVYEISNYIVGVEQLTTTTLRNVVGGMTLEQTLTSRDQINGQLRGVLDEATGRWGLRVAR
VELRSIDPPPSVQESMEKQMKADREKRAMILNAEGVREASIKQAEGAKQSQILAAEGAKQAAILSAEADRQSRILRAEGE
RAAQYLQAQGQAKAIEKVFAAVKSGKPTPELLAYQYLQTLPKMAEGEANKVWLIPSDFGSALQGFTKLLGAPGDDGVFRY
EPSPVDTSTERPEDDSDEVAGWFDTKATPEAAAAVAEAQSAAKEIGQIDPVSRHQLPEV

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI7305503, Length=293, Percent_Identity=36.1774744027304, Blast_Score=173, Evalue=2e-43,
Organism=Homo sapiens, GI21686995, Length=207, Percent_Identity=36.231884057971, Blast_Score=113, Evalue=3e-25,
Organism=Homo sapiens, GI221316744, Length=207, Percent_Identity=36.231884057971, Blast_Score=112, Evalue=4e-25,
Organism=Homo sapiens, GI38016911, Length=194, Percent_Identity=35.5670103092784, Blast_Score=105, Evalue=8e-23,
Organism=Homo sapiens, GI7657615, Length=197, Percent_Identity=24.8730964467005, Blast_Score=81, Evalue=1e-15,
Organism=Escherichia coli, GI1786697, Length=314, Percent_Identity=38.8535031847134, Blast_Score=222, Evalue=4e-59,
Organism=Caenorhabditis elegans, GI32564147, Length=282, Percent_Identity=35.8156028368794, Blast_Score=164, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI193209764, Length=219, Percent_Identity=33.7899543378995, Blast_Score=118, Evalue=7e-27,
Organism=Caenorhabditis elegans, GI17569493, Length=219, Percent_Identity=33.7899543378995, Blast_Score=117, Evalue=9e-27,
Organism=Caenorhabditis elegans, GI25153583, Length=216, Percent_Identity=35.1851851851852, Blast_Score=109, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17569499, Length=203, Percent_Identity=36.4532019704434, Blast_Score=109, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI71987612, Length=216, Percent_Identity=35.1851851851852, Blast_Score=108, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI17570161, Length=232, Percent_Identity=33.1896551724138, Blast_Score=108, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI193210507, Length=237, Percent_Identity=32.9113924050633, Blast_Score=108, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI71987621, Length=214, Percent_Identity=34.1121495327103, Blast_Score=107, Evalue=9e-24,
Organism=Caenorhabditis elegans, GI17569497, Length=202, Percent_Identity=32.1782178217822, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71989948, Length=158, Percent_Identity=39.873417721519, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI71989955, Length=158, Percent_Identity=39.873417721519, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17570459, Length=211, Percent_Identity=36.4928909952607, Blast_Score=102, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI32566490, Length=201, Percent_Identity=33.3333333333333, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI71989963, Length=121, Percent_Identity=39.6694214876033, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI45550506, Length=286, Percent_Identity=36.013986013986, Blast_Score=169, Evalue=3e-42,
Organism=Drosophila melanogaster, GI281361633, Length=237, Percent_Identity=30.8016877637131, Blast_Score=119, Evalue=4e-27,
Organism=Drosophila melanogaster, GI18860517, Length=235, Percent_Identity=33.6170212765957, Blast_Score=119, Evalue=5e-27,
Organism=Drosophila melanogaster, GI281361631, Length=237, Percent_Identity=30.8016877637131, Blast_Score=118, Evalue=5e-27,
Organism=Drosophila melanogaster, GI21356845, Length=199, Percent_Identity=32.6633165829146, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24657857, Length=198, Percent_Identity=36.3636363636364, Blast_Score=109, Evalue=3e-24,
Organism=Drosophila melanogaster, GI45556022, Length=210, Percent_Identity=36.1904761904762, Blast_Score=109, Evalue=3e-24,
Organism=Drosophila melanogaster, GI281365664, Length=198, Percent_Identity=36.3636363636364, Blast_Score=109, Evalue=3e-24,
Organism=Drosophila melanogaster, GI62484448, Length=198, Percent_Identity=36.3636363636364, Blast_Score=108, Evalue=6e-24,
Organism=Drosophila melanogaster, GI62484274, Length=198, Percent_Identity=36.3636363636364, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI28573263, Length=206, Percent_Identity=34.9514563106796, Blast_Score=106, Evalue=3e-23,
Organism=Drosophila melanogaster, GI281361635, Length=173, Percent_Identity=31.2138728323699, Blast_Score=92, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 41145; Mature: 41014

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: PS01270 BAND_7

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVAAGVFVLIVLIILGVTIVLKSVALVPQAEAAVIERLGRYSKTVSGQLTILVPFVDRI
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHH
RAKVDLRERVVSFPPQPVITEDNLTVNIDTVVYFQVTNPQAAVYEISNYIVGVEQLTTTT
HHHHHHHHHHHCCCCCCCEECCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
LRNVVGGMTLEQTLTSRDQINGQLRGVLDEATGRWGLRVARVELRSIDPPPSVQESMEKQ
HHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEEHHHCCCCCCHHHHHHHHH
MKADREKRAMILNAEGVREASIKQAEGAKQSQILAAEGAKQAAILSAEADRQSRILRAEG
HHHCHHHCEEEECCCCCHHHHHHHHCCCCHHHHHHHCCCCHHEEEECCCHHHHHHHHHCH
ERAAQYLQAQGQAKAIEKVFAAVKSGKPTPELLAYQYLQTLPKMAEGEANKVWLIPSDFG
HHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECHHH
SALQGFTKLLGAPGDDGVFRYEPSPVDTSTERPEDDSDEVAGWFDTKATPEAAAAVAEAQ
HHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCHHCEECCCCCCHHHHHHHHHHH
SAAKEIGQIDPVSRHQLPEV
HHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
GVAAGVFVLIVLIILGVTIVLKSVALVPQAEAAVIERLGRYSKTVSGQLTILVPFVDRI
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHH
RAKVDLRERVVSFPPQPVITEDNLTVNIDTVVYFQVTNPQAAVYEISNYIVGVEQLTTTT
HHHHHHHHHHHCCCCCCCEECCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
LRNVVGGMTLEQTLTSRDQINGQLRGVLDEATGRWGLRVARVELRSIDPPPSVQESMEKQ
HHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEEHHHCCCCCCHHHHHHHHH
MKADREKRAMILNAEGVREASIKQAEGAKQSQILAAEGAKQAAILSAEADRQSRILRAEG
HHHCHHHCEEEECCCCCHHHHHHHHCCCCHHHHHHHCCCCHHEEEECCCHHHHHHHHHCH
ERAAQYLQAQGQAKAIEKVFAAVKSGKPTPELLAYQYLQTLPKMAEGEANKVWLIPSDFG
HHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECHHH
SALQGFTKLLGAPGDDGVFRYEPSPVDTSTERPEDDSDEVAGWFDTKATPEAAAAVAEAQ
HHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCHHCEECCCCCCHHHHHHHHHHH
SAAKEIGQIDPVSRHQLPEV
HHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]