| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629742
Identifier: 169629742
GI number: 169629742
Start: 2700159
End: 2701427
Strand: Reverse
Name: 169629742
Synonym: MAB_2657c
Alternate gene names: NA
Gene position: 2701427-2700159 (Counterclockwise)
Preceding gene: 169629746
Following gene: 169629738
Centisome position: 53.31
GC content: 65.64
Gene sequence:
>1269_bases TTGAACGAGGGGAGCGAGCGCGTGCACACTCAGAGCATGACGCCGGATCAGTTGTGGCCAGATGCATCCGAGCCGGTCCG CCGGTTGATCCGCGAACTGGCCGAGAAGATGTTGGCGAGGTCCGGGGAAGTCGCCGGCGATCTCACGGCAGCATCCCTCG AAGACCCGCGATACCGGACGATCGCCGACGATCCGGTGATCGCAGAGGTCGACGCACGTCTGACGGTCTCCAACCTCAAG CATTGGCTGACATCCAATATCTCCGAACCCGGTCACCGGGTCAGGCCCGCAACGGGCAGCGCGATGCGTACCTATGCGCG TGACGTCGTCCTGCGCGGTCTCACGACCGACGACATCCAGTCATGGCGCGCGGTTCAGCGGGTGGGTTGGAAGTGGTGGT TAGCAGCCTGCTTTCAGGTGACCGATGACAAGGAACAACTCTGTGAGCTGATCGAGGTCACCAGCAATTCGCTCACCACA TTCGTCGACGACTCGATCGCCGAGCTGGCAGAACATGTGCGGCGAGTGCGCGAGGAGCTCGCCGGCGGCTCGCAGTTGCA GCGCTACGCCACGGTCGAACTCCTGCTCCAGGGCGCCGACATTGCGCCCGCCCGGGCCGAAGCACAGCTCGGTTACGCGC TGACCGGTTCACATATCGGCGCGGTGGTCTGGGTCGACTCCGAGAAGGAGATCGCCGCGCTTGAGCGCGCCAGCGAACAG GTGATGAGAGCGTGCGGGGCCGACCGCCGTCTGACGGTGGTCGCCGGCACGGTGGCGTTGTGGCTGTGGATACCCGCGAA GACGACACCCACGGTCGCTGTTCTCATGGACAGTCTGGGGCGACGGTCAGGTGTGCGGGTAGCGCTCGGCCGCGCCGCGA CCGGGATGGCGGGATTCCGCCGAACCCACATGGATGCGGCTGCCGCGCAACGGCTTTTGGCCCGCCTGGGCTCTCCGCTC TCCGTCGTGCGCTATGAGGACGTCCACCTGATGGACCTGCTGTCCGCCGACCCTGCGTCGGCAGACCAATTCGTCACGGA TGTACTCGGTGAATTCCAGTCCGCTAGCCCGGTGCTGCACCAGACGGTACTCACCTACGTGGAAGAGGCTCTCAACCGGA CGAGCACGGCAGAGCGGCTGTACACCCACCGCAACACCATTGATCGGCGCCTCGCTCGCGTCGACGAACTCCTCCCGAAA CCCTTCGCACGCAACCCGATCGAGGTGGCGGCCGCCCTGACCCTGCTGCGTGTGCGCGCGGGTCGGTGA
Upstream 100 bases:
>100_bases ATGAAAGGCCGACAAAGGCATGAGGTGATCACATGCCCGTGCTAGCTGAGATGCCTCACGGCGGATTCAAGCAATCCCCG CAGGCATCTGTGGGAACGCC
Downstream 100 bases:
>100_bases TGGGTGGCCACGCTTCTCGATCTATGTCCTCGCTAGGCCAAACCATATTGGGCGGAGTCGGTTGTGGTTCTGCCTTGGCT CCACTGAGCTGACTAGTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MNEGSERVHTQSMTPDQLWPDASEPVRRLIRELAEKMLARSGEVAGDLTAASLEDPRYRTIADDPVIAEVDARLTVSNLK HWLTSNISEPGHRVRPATGSAMRTYARDVVLRGLTTDDIQSWRAVQRVGWKWWLAACFQVTDDKEQLCELIEVTSNSLTT FVDDSIAELAEHVRRVREELAGGSQLQRYATVELLLQGADIAPARAEAQLGYALTGSHIGAVVWVDSEKEIAALERASEQ VMRACGADRRLTVVAGTVALWLWIPAKTTPTVAVLMDSLGRRSGVRVALGRAATGMAGFRRTHMDAAAAQRLLARLGSPL SVVRYEDVHLMDLLSADPASADQFVTDVLGEFQSASPVLHQTVLTYVEEALNRTSTAERLYTHRNTIDRRLARVDELLPK PFARNPIEVAAALTLLRVRAGR
Sequences:
>Translated_422_residues MNEGSERVHTQSMTPDQLWPDASEPVRRLIRELAEKMLARSGEVAGDLTAASLEDPRYRTIADDPVIAEVDARLTVSNLK HWLTSNISEPGHRVRPATGSAMRTYARDVVLRGLTTDDIQSWRAVQRVGWKWWLAACFQVTDDKEQLCELIEVTSNSLTT FVDDSIAELAEHVRRVREELAGGSQLQRYATVELLLQGADIAPARAEAQLGYALTGSHIGAVVWVDSEKEIAALERASEQ VMRACGADRRLTVVAGTVALWLWIPAKTTPTVAVLMDSLGRRSGVRVALGRAATGMAGFRRTHMDAAAAQRLLARLGSPL SVVRYEDVHLMDLLSADPASADQFVTDVLGEFQSASPVLHQTVLTYVEEALNRTSTAERLYTHRNTIDRRLARVDELLPK PFARNPIEVAAALTLLRVRAGR >Mature_422_residues MNEGSERVHTQSMTPDQLWPDASEPVRRLIRELAEKMLARSGEVAGDLTAASLEDPRYRTIADDPVIAEVDARLTVSNLK HWLTSNISEPGHRVRPATGSAMRTYARDVVLRGLTTDDIQSWRAVQRVGWKWWLAACFQVTDDKEQLCELIEVTSNSLTT FVDDSIAELAEHVRRVREELAGGSQLQRYATVELLLQGADIAPARAEAQLGYALTGSHIGAVVWVDSEKEIAALERASEQ VMRACGADRRLTVVAGTVALWLWIPAKTTPTVAVLMDSLGRRSGVRVALGRAATGMAGFRRTHMDAAAAQRLLARLGSPL SVVRYEDVHLMDLLSADPASADQFVTDVLGEFQSASPVLHQTVLTYVEEALNRTSTAERLYTHRNTIDRRLARVDELLPK PFARNPIEVAAALTLLRVRAGR
Specific function: Unknown
COG id: COG2508
COG function: function code TQ; Regulator of polyketide synthase expression
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46528; Mature: 46528
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEGSERVHTQSMTPDQLWPDASEPVRRLIRELAEKMLARSGEVAGDLTAASLEDPRYRT CCCCCHHHCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCC IADDPVIAEVDARLTVSNLKHWLTSNISEPGHRVRPATGSAMRTYARDVVLRGLTTDDIQ CCCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHH SWRAVQRVGWKWWLAACFQVTDDKEQLCELIEVTSNSLTTFVDDSIAELAEHVRRVREEL HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH AGGSQLQRYATVELLLQGADIAPARAEAQLGYALTGSHIGAVVWVDSEKEIAALERASEQ CCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCEEEECCCCEEEEEECCCHHHHHHHHHHHH VMRACGADRRLTVVAGTVALWLWIPAKTTPTVAVLMDSLGRRSGVRVALGRAATGMAGFR HHHHHCCCCEEEEEEHHHHHEEEECCCCCCHHHHHHHHHCCCCCCEEEECCHHHHHHHHH RTHMDAAAAQRLLARLGSPLSVVRYEDVHLMDLLSADPASADQFVTDVLGEFQSASPVLH HHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHH QTVLTYVEEALNRTSTAERLYTHRNTIDRRLARVDELLPKPFARNPIEVAAALTLLRVRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHC GR CC >Mature Secondary Structure MNEGSERVHTQSMTPDQLWPDASEPVRRLIRELAEKMLARSGEVAGDLTAASLEDPRYRT CCCCCHHHCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCC IADDPVIAEVDARLTVSNLKHWLTSNISEPGHRVRPATGSAMRTYARDVVLRGLTTDDIQ CCCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHH SWRAVQRVGWKWWLAACFQVTDDKEQLCELIEVTSNSLTTFVDDSIAELAEHVRRVREEL HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH AGGSQLQRYATVELLLQGADIAPARAEAQLGYALTGSHIGAVVWVDSEKEIAALERASEQ CCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCEEEECCCCEEEEEECCCHHHHHHHHHHHH VMRACGADRRLTVVAGTVALWLWIPAKTTPTVAVLMDSLGRRSGVRVALGRAATGMAGFR HHHHHCCCCEEEEEEHHHHHEEEECCCCCCHHHHHHHHHCCCCCCEEEECCHHHHHHHHH RTHMDAAAAQRLLARLGSPLSVVRYEDVHLMDLLSADPASADQFVTDVLGEFQSASPVLH HHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHH QTVLTYVEEALNRTSTAERLYTHRNTIDRRLARVDELLPKPFARNPIEVAAALTLLRVRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHC GR CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA