| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629738
Identifier: 169629738
GI number: 169629738
Start: 2695323
End: 2696537
Strand: Reverse
Name: 169629738
Synonym: MAB_2653c
Alternate gene names: NA
Gene position: 2696537-2695323 (Counterclockwise)
Preceding gene: 169629742
Following gene: 169629737
Centisome position: 53.22
GC content: 60.0
Gene sequence:
>1215_bases ATGGCACACGACAGTGCGAATGAGATGTCGGTCGATGCCAGAACTCTGCTGGCCGATATTGTCTCGGACGGGCAGCTCCA GCGTGTTGTTGATATCGCCGAGCGGGCAGCGAATTTGATCGCCGGATTCTCCGAAAAACCGGGCGGAATGCCGCTTTCGG AGGTCTTGGACTGGATCGAGCGGATCAATGCCGACGCAGTTGCCTCCTTGCGGGAAGATCGCCCACCGGACCTGGCGCTG GCCCGGCGCCTCGGAGCGCGCTGCTGCGAGGCTCAGGTTGCGCTTGCCGACGCACAGACACTGCGGCGAATGGTGTTCGA CTCGGATTGGCGTCACTTGTTCGTCAGCTTAAGAAGCCGATCGATATCGGTGGAGATCGCCGTTGACATCACCGCCGCGC ACTGGGAGCTGATGAACGAGATCGACGATGCGATCGTCGAGGCGTATCGGGAAGTAGAGACCAGCCGAAAGATGCGACGC GCGGAGCGGAACGCCGTGCTGGTGGATGTCTTGCTGGCTGACGCTATGCCCGATCCAGACACTACCTTTGCCAGGCTCAA CGAGTTGATGATCGCGTCCGCTCCGTTCTATTGCGTGACCGTCATACGCGTCGCGAAACTCGGCGAGGCGCCGCTGCCGA ACATCGAGAACTTGCTACGCCGGGAGTCTTTCGATTCTGCGTGGCGGTTGGGCGCCGAAGCTCAGACCGGAATCGTTGCA GTTCAAAGCCGCAGCGGTGCAATACGATTGAAGGAGACACTGGTCCGGCTGAAGGCTGCGGGTACGGGTATCAGCGTTCC GGTGTCCGCGCTTGAAATTCCGAAGGGATTGCGGCTGGCTCAACTTGCTTCCGAGACAACGACCGAACGGGAGCAAGTAA TTGTGTTCGGCGACAACGTAACCGACACAACGATTGTTGCGGCGTCGCCAGAGGTGTTGCGGCTGCTCAGCAGTCAGAGT TTTCGTGAAGTCCTGCGGCTGCCGGACGCTACCCGCGAGCACCTCTTGGAAACGTTCGAGCGTTGGCTTGAGTGCAAGGG GTCGGTACGGCTCACCGCACTCGCGCTCGATCGGCACGTCAACACGGTGCGCCAGAGGCTCAACAAGATTCAGGAACTCA CCGGAAAATCGCTCGACAATCCACGAGATTTGGCCGACCTCGTTGTCCTCATACGCTTTGCGCGCTCGGACTTGTCGTCG ACGGGTGAGAACTGA
Upstream 100 bases:
>100_bases GATGTGACGCGCACCACGGCGAAATGCAACGTTCTGCGTCCCGCGGTGGTGTGAATCGCACCTCGTCGGCTCTGTGACCA GGCGGGGATAGCATGGTCGG
Downstream 100 bases:
>100_bases TCATCTGGGTATGCGAGTCATCAGGTCACCGATGGCGCGGTGCGCCTCGGTCAATCGATCGATTTGCGACGTTGGGCGAA TCTGATGCTGCGCCAGATGT
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator PucR Family; Regulatory Protein; PE-PGRS Family Protein
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MAHDSANEMSVDARTLLADIVSDGQLQRVVDIAERAANLIAGFSEKPGGMPLSEVLDWIERINADAVASLREDRPPDLAL ARRLGARCCEAQVALADAQTLRRMVFDSDWRHLFVSLRSRSISVEIAVDITAAHWELMNEIDDAIVEAYREVETSRKMRR AERNAVLVDVLLADAMPDPDTTFARLNELMIASAPFYCVTVIRVAKLGEAPLPNIENLLRRESFDSAWRLGAEAQTGIVA VQSRSGAIRLKETLVRLKAAGTGISVPVSALEIPKGLRLAQLASETTTEREQVIVFGDNVTDTTIVAASPEVLRLLSSQS FREVLRLPDATREHLLETFERWLECKGSVRLTALALDRHVNTVRQRLNKIQELTGKSLDNPRDLADLVVLIRFARSDLSS TGEN
Sequences:
>Translated_404_residues MAHDSANEMSVDARTLLADIVSDGQLQRVVDIAERAANLIAGFSEKPGGMPLSEVLDWIERINADAVASLREDRPPDLAL ARRLGARCCEAQVALADAQTLRRMVFDSDWRHLFVSLRSRSISVEIAVDITAAHWELMNEIDDAIVEAYREVETSRKMRR AERNAVLVDVLLADAMPDPDTTFARLNELMIASAPFYCVTVIRVAKLGEAPLPNIENLLRRESFDSAWRLGAEAQTGIVA VQSRSGAIRLKETLVRLKAAGTGISVPVSALEIPKGLRLAQLASETTTEREQVIVFGDNVTDTTIVAASPEVLRLLSSQS FREVLRLPDATREHLLETFERWLECKGSVRLTALALDRHVNTVRQRLNKIQELTGKSLDNPRDLADLVVLIRFARSDLSS TGEN >Mature_403_residues AHDSANEMSVDARTLLADIVSDGQLQRVVDIAERAANLIAGFSEKPGGMPLSEVLDWIERINADAVASLREDRPPDLALA RRLGARCCEAQVALADAQTLRRMVFDSDWRHLFVSLRSRSISVEIAVDITAAHWELMNEIDDAIVEAYREVETSRKMRRA ERNAVLVDVLLADAMPDPDTTFARLNELMIASAPFYCVTVIRVAKLGEAPLPNIENLLRRESFDSAWRLGAEAQTGIVAV QSRSGAIRLKETLVRLKAAGTGISVPVSALEIPKGLRLAQLASETTTEREQVIVFGDNVTDTTIVAASPEVLRLLSSQSF REVLRLPDATREHLLETFERWLECKGSVRLTALALDRHVNTVRQRLNKIQELTGKSLDNPRDLADLVVLIRFARSDLSST GEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44709; Mature: 44577
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHDSANEMSVDARTLLADIVSDGQLQRVVDIAERAANLIAGFSEKPGGMPLSEVLDWIE CCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH RINADAVASLREDRPPDLALARRLGARCCEAQVALADAQTLRRMVFDSDWRHLFVSLRSR HHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC SISVEIAVDITAAHWELMNEIDDAIVEAYREVETSRKMRRAERNAVLVDVLLADAMPDPD EEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC TTFARLNELMIASAPFYCVTVIRVAKLGEAPLPNIENLLRRESFDSAWRLGAEAQTGIVA HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHCCCCCCCCEEE VQSRSGAIRLKETLVRLKAAGTGISVPVSALEIPKGLRLAQLASETTTEREQVIVFGDNV EECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHCCCCCCEEEEECCCC TDTTIVAASPEVLRLLSSQSFREVLRLPDATREHLLETFERWLECKGSVRLTALALDRHV CCCEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHH NTVRQRLNKIQELTGKSLDNPRDLADLVVLIRFARSDLSSTGEN HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AHDSANEMSVDARTLLADIVSDGQLQRVVDIAERAANLIAGFSEKPGGMPLSEVLDWIE CCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH RINADAVASLREDRPPDLALARRLGARCCEAQVALADAQTLRRMVFDSDWRHLFVSLRSR HHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC SISVEIAVDITAAHWELMNEIDDAIVEAYREVETSRKMRRAERNAVLVDVLLADAMPDPD EEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC TTFARLNELMIASAPFYCVTVIRVAKLGEAPLPNIENLLRRESFDSAWRLGAEAQTGIVA HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHCCCCCCCCEEE VQSRSGAIRLKETLVRLKAAGTGISVPVSALEIPKGLRLAQLASETTTEREQVIVFGDNV EECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHCCCCCCEEEEECCCC TDTTIVAASPEVLRLLSSQSFREVLRLPDATREHLLETFERWLECKGSVRLTALALDRHV CCCEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHH NTVRQRLNKIQELTGKSLDNPRDLADLVVLIRFARSDLSSTGEN HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA