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The map label for this gene is ywaF [H]

Identifier: 169629706

GI number: 169629706

Start: 2662042

End: 2662761

Strand: Direct

Name: ywaF [H]

Synonym: MAB_2620

Alternate gene names: 169629706

Gene position: 2662042-2662761 (Clockwise)

Preceding gene: 169629705

Following gene: 169629714

Centisome position: 52.54

GC content: 63.33

Gene sequence:

>720_bases
ATGGCATCGTCTGCGCTACGGGAGTTTCACCAGTACGGCCCATCTCATATCGCCGCCATGACACTCTTCGCATGTGGCGC
GATGGCCCTAGTATGGTTGGGGCGCAAGCAAACTGAGACGCAGGCACGCATCCTCGGCCGGGTCCTCGGGGTAATCACGG
CGGCCATCTACGTGGTGGTGCTGGCAGCGGGCCTGAATCCGCCGCGGCTCGAAGTGTCTGTACCGCTACGGCTGACCGAT
CTCGCCACCGTGGTGGGCGCCTATGCCCTGTGGTCGCAGCGACATTGGGCATATGCGCTGACCTACTACTGGGGCTTGGT
GCTCAGCAGCCAAGCGCTCATCTCGCCGGCTCTCGACGGGCCCGACTTCCCCAGCTTCGGCTTTCTCGCCTTCTGGTCGA
TTCACCTGCTGGTCGTCTGGGCCGCGATCTACCTGACCTGGGGCCGGGGCCTGCGGCCAACGTGGCGCAGCTATCGGATG
GTGGCCACCGTCAGCCTGACATGGACGGTTTTCACGATGGGTTTCAACGCCGTCGCCGGCTCCAACTACGGATTTCTCAA
TCGGAAGCCCTCGACGGCAAGTCTTTTCGACCTAATGGGTCCGTGGCCGTGGTACGTGGTGGTGGCGACCGTGTTGGTGC
TGGCGGTGTGGGCACTGATGACCTGGCCGTGGGAACGGCCCTGGGGCAAGACGGTTACCTCTCAGACCACTCCGAGATAA

Upstream 100 bases:

>100_bases
GGTATCACCGCGAATCAGGGCTTGTTCGGCAATGGTTCATCGGTCATCGTTGCCCGTTAGCCTGACCGGGCGGCAATTCG
TTCGGCGATAGCCTCACACG

Downstream 100 bases:

>100_bases
GCCGACCGAATACTGTCGTCTTGCAACAGCTCTCGGCCAGCACCGGATCGAACCACCGATCCGGTCTCCAGGATATAGGC
GTGATCCGAACGGCTCAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MASSALREFHQYGPSHIAAMTLFACGAMALVWLGRKQTETQARILGRVLGVITAAIYVVVLAAGLNPPRLEVSVPLRLTD
LATVVGAYALWSQRHWAYALTYYWGLVLSSQALISPALDGPDFPSFGFLAFWSIHLLVVWAAIYLTWGRGLRPTWRSYRM
VATVSLTWTVFTMGFNAVAGSNYGFLNRKPSTASLFDLMGPWPWYVVVATVLVLAVWALMTWPWERPWGKTVTSQTTPR

Sequences:

>Translated_239_residues
MASSALREFHQYGPSHIAAMTLFACGAMALVWLGRKQTETQARILGRVLGVITAAIYVVVLAAGLNPPRLEVSVPLRLTD
LATVVGAYALWSQRHWAYALTYYWGLVLSSQALISPALDGPDFPSFGFLAFWSIHLLVVWAAIYLTWGRGLRPTWRSYRM
VATVSLTWTVFTMGFNAVAGSNYGFLNRKPSTASLFDLMGPWPWYVVVATVLVLAVWALMTWPWERPWGKTVTSQTTPR
>Mature_238_residues
ASSALREFHQYGPSHIAAMTLFACGAMALVWLGRKQTETQARILGRVLGVITAAIYVVVLAAGLNPPRLEVSVPLRLTDL
ATVVGAYALWSQRHWAYALTYYWGLVLSSQALISPALDGPDFPSFGFLAFWSIHLLVVWAAIYLTWGRGLRPTWRSYRMV
ATVSLTWTVFTMGFNAVAGSNYGFLNRKPSTASLFDLMGPWPWYVVVATVLVLAVWALMTWPWERPWGKTVTSQTTPR

Specific function: Unknown

COG id: COG5522

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011737 [H]

Pfam domain/function: PF09529 Intg_mem_TP0381 [H]

EC number: NA

Molecular weight: Translated: 26630; Mature: 26499

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASSALREFHQYGPSHIAAMTLFACGAMALVWLGRKQTETQARILGRVLGVITAAIYVVV
CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LAAGLNPPRLEVSVPLRLTDLATVVGAYALWSQRHWAYALTYYWGLVLSSQALISPALDG
HHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCC
PDFPSFGFLAFWSIHLLVVWAAIYLTWGRGLRPTWRSYRMVATVSLTWTVFTMGFNAVAG
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEEEEEHHHHHHHHHHHHHCC
SNYGFLNRKPSTASLFDLMGPWPWYVVVATVLVLAVWALMTWPWERPWGKTVTSQTTPR
CCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ASSALREFHQYGPSHIAAMTLFACGAMALVWLGRKQTETQARILGRVLGVITAAIYVVV
CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LAAGLNPPRLEVSVPLRLTDLATVVGAYALWSQRHWAYALTYYWGLVLSSQALISPALDG
HHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCC
PDFPSFGFLAFWSIHLLVVWAAIYLTWGRGLRPTWRSYRMVATVSLTWTVFTMGFNAVAG
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEEEEEHHHHHHHHHHHHHCC
SNYGFLNRKPSTASLFDLMGPWPWYVVVATVLVLAVWALMTWPWERPWGKTVTSQTTPR
CCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1806041; 7934828; 9384377 [H]