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The map label for this gene is ycdH [C]

Identifier: 169629593

GI number: 169629593

Start: 2562686

End: 2563186

Strand: Direct

Name: ycdH [C]

Synonym: MAB_2507

Alternate gene names: 169629593

Gene position: 2562686-2563186 (Clockwise)

Preceding gene: 169629588

Following gene: 169629594

Centisome position: 50.57

GC content: 62.87

Gene sequence:

>501_bases
ATGCCGGAAAACTGCGCGCAAGCCCAGTTCGCCAGCCTTATGTGCCAATTGGATCAACCGGTGTATGTGGTGACGGTGCG
AGGGGCCGATGGTCCCGCGGGGTGTCTTGTCGGATTCGCCGGCCAGGTCAGTATCGATCCGCCGCTGTTTCTCGCAGGGC
TGTCCGAGAAGAACCACACCTGGCGTGCTTCGCAGCAGGCAAGTCACCTGGCAGTGCATATAATCCCACGCGCGGAAGAC
GAGCTGGTGCACCTCTTCGGCGAGCTGACGGGAGACAGTGTCGACAAGTTTGCGCGATGTACCTGGCGCGACGGTCCGCA
CGGTGTCCCCATCCTGGAACAGTCCGCCGCCTGGTTCGTGGGCGAGATACTGGCCCGTATCACGCTGGGTGACCATATCG
GCCATGTGCTGTTGCCGGTGGCCGTAAGCCGCTCGCGGGAACTGGGTCAGTATGTGTCCCTCAGCGACGTCCACGGGCTC
ACTCCCGGTCACGAAGCCTAG

Upstream 100 bases:

>100_bases
GACTGTCGTACTGAGCCCGCCTACCCGTTCTTGGCAGTGACAAACGGGGTATGCAAACGGGGTATGACTGAGATAGGGAT
CGGAGGTCGAGATGACAGGC

Downstream 100 bases:

>100_bases
GGCGGAAAGTTCGTTTGACGGCAGTCCGCCGGGGTACTCACCGTGTGTGAATCGTACTGTGATCGCCGCCGAGCCCCGCC
TCCCGCAACCGCGGGGGCCG

Product: putative oxidoreductase

Products: NAD(+); reduced flavin [C]

Alternate protein names: Flavin-Dependent Reductase; Flavin Reductase Domain-Containing Protein; 4-Hydroxyphenylacetate 3-Monooxygenase Reductase Component; Flavin Reductase Like Domain-Containing Protein; Flavin Oxygenase; Flavoprotein Oxidoreductase; CaiB/BaiF Family Protein

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MPENCAQAQFASLMCQLDQPVYVVTVRGADGPAGCLVGFAGQVSIDPPLFLAGLSEKNHTWRASQQASHLAVHIIPRAED
ELVHLFGELTGDSVDKFARCTWRDGPHGVPILEQSAAWFVGEILARITLGDHIGHVLLPVAVSRSRELGQYVSLSDVHGL
TPGHEA

Sequences:

>Translated_166_residues
MPENCAQAQFASLMCQLDQPVYVVTVRGADGPAGCLVGFAGQVSIDPPLFLAGLSEKNHTWRASQQASHLAVHIIPRAED
ELVHLFGELTGDSVDKFARCTWRDGPHGVPILEQSAAWFVGEILARITLGDHIGHVLLPVAVSRSRELGQYVSLSDVHGL
TPGHEA
>Mature_165_residues
PENCAQAQFASLMCQLDQPVYVVTVRGADGPAGCLVGFAGQVSIDPPLFLAGLSEKNHTWRASQQASHLAVHIIPRAEDE
LVHLFGELTGDSVDKFARCTWRDGPHGVPILEQSAAWFVGEILARITLGDHIGHVLLPVAVSRSRELGQYVSLSDVHGLT
PGHEA

Specific function: Catalyzes The Reduction Of Free Flavins (Fmn, FAD And Riboflavin) By NADH (By Similarity). [C]

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.6.8.- [C]

Molecular weight: Translated: 17852; Mature: 17721

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPENCAQAQFASLMCQLDQPVYVVTVRGADGPAGCLVGFAGQVSIDPPLFLAGLSEKNHT
CCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEECCCCEECCCCEEEEECCCCCCC
WRASQQASHLAVHIIPRAEDELVHLFGELTGDSVDKFARCTWRDGPHGVPILEQSAAWFV
CCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCEECCCHHHHH
GEILARITLGDHIGHVLLPVAVSRSRELGQYVSLSDVHGLTPGHEA
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHCCCCCCCCCC
>Mature Secondary Structure 
PENCAQAQFASLMCQLDQPVYVVTVRGADGPAGCLVGFAGQVSIDPPLFLAGLSEKNHT
CCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEECCCCEECCCCEEEEECCCCCCC
WRASQQASHLAVHIIPRAEDELVHLFGELTGDSVDKFARCTWRDGPHGVPILEQSAAWFV
CCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCEECCCHHHHH
GEILARITLGDHIGHVLLPVAVSRSRELGQYVSLSDVHGLTPGHEA
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; flavin [C]

Specific reaction: NADH + flavin = NAD(+) + reduced flavin [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA