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The map label for this gene is 169629588

Identifier: 169629588

GI number: 169629588

Start: 2556342

End: 2557358

Strand: Direct

Name: 169629588

Synonym: MAB_2502

Alternate gene names: NA

Gene position: 2556342-2557358 (Clockwise)

Preceding gene: 169629587

Following gene: 169629593

Centisome position: 50.45

GC content: 61.55

Gene sequence:

>1017_bases
ATGCGCCTACGCCGAAGCACACCCGATGCGCCGGGGATTGCACGTAAACGATGCGGCAAGGGTTTCGCCTATTACGCCGC
CAACGGCGACGTGTTATCCGATGATGCGACACTGCAACGAATTAAGTCGCTGGCCATCCCGCCGGCGTGGAATGAGGTGT
GGATCAGTCCACACATCAACGGCCACATTCAGGCGGTCGGCAGAGACACCGCAGGCAGGCGACAGTACATCTACCATGAG
GCATGGCAAGACGAGCGTGCTGAGGAAAAGTTCGACAGAGTACTGGAACTGTCACGTCGGCTGCCCGAGTTACGTGCGCA
CATCGATGAGGATCTCGACACGCGGGGCGCCACTCGCCGTCGGGTCCTCGCGTTGGGTATCCGGCTGCTCGACCATGGCC
ATTTTCGTTCCGGTGGAGACGAATACGCGGATGACAACGATTCCTACGGCGTGGCTACGCTTCTCCCGGAGCACGTGCGC
GTGCGCGGCTCGCTGACAATTTTCGACTACCCGGCGAAAAGCGGTGTCCGGCAACACTTTGAAGTGGTCGATGCCAAGGC
TGCGCGTGGCATCCGCGGGTTGCTGCGCATCAACGACGGGTCACATCGACTCCTGCGATACCGTGACGGGCACGAACTTG
TAGAGGTTCGCTCCGACGATTTGAACCAGTACTTCAGGAGCGTTGTCGGTGGCGAGTTCAGTGTCAAGGATCTGCGTACC
TGGCACGGAACGGTCCTTGCCGCCATAGAGTTTTCGGAAATGGTGACGCCGCCAGAGAATCGGACACAGATCGCCAAGGC
GACGTCGGCGGTGATGAAACAGGTCGGTGCGGCGTTGGGCAACACCGCCACCGTGGCCCGCGACGCATACGTTGATCCCC
GGGTGGTGGTGAGCTATCGGCATGGACGCACGATCGCGCCGGCACTGCGGCGGGCGGCACGCAAGAAACCGGATGCGGCC
CAAAACATCCTCGACAAGGCAACCCGCCACCTCATCCAGCGTGCCGCGCGGCTGTGA

Upstream 100 bases:

>100_bases
GGCCCGGATGTAAGCATCGCGAGCGCACCGGCAAATAGCTCGTACGTGTAGGACCGCTCCCGCACGGGTAGTGCACCCAC
CAAGCGATTGGGAGGGTTCC

Downstream 100 bases:

>100_bases
AAGGGGTTCCTGCTAGCGTGCGCCGTCGGCCGGAAGTCGATCGAGTGGCTCGGTGGCGGGCCCCCAGAGAACCGAACCGC
CCGAATCGAAGCAGGAGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: DNA poisomerase I; DNA poisomerase Type I; DNA poisomerase IB; Type I poisomerase; DNA poisomerase I Protein; Poisomerase IB; Poisomerase IB-Like Protein; Viral-Like DNA poisomerase; DNA poisomerase I-Like Protein; DNA poisomerasei; -Like DNA poisomerase I; DNA poisomerase ; Type I DNA poisomerase; Eukaryotic-Like DNA poisomerase I

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MRLRRSTPDAPGIARKRCGKGFAYYAANGDVLSDDATLQRIKSLAIPPAWNEVWISPHINGHIQAVGRDTAGRRQYIYHE
AWQDERAEEKFDRVLELSRRLPELRAHIDEDLDTRGATRRRVLALGIRLLDHGHFRSGGDEYADDNDSYGVATLLPEHVR
VRGSLTIFDYPAKSGVRQHFEVVDAKAARGIRGLLRINDGSHRLLRYRDGHELVEVRSDDLNQYFRSVVGGEFSVKDLRT
WHGTVLAAIEFSEMVTPPENRTQIAKATSAVMKQVGAALGNTATVARDAYVDPRVVVSYRHGRTIAPALRRAARKKPDAA
QNILDKATRHLIQRAARL

Sequences:

>Translated_338_residues
MRLRRSTPDAPGIARKRCGKGFAYYAANGDVLSDDATLQRIKSLAIPPAWNEVWISPHINGHIQAVGRDTAGRRQYIYHE
AWQDERAEEKFDRVLELSRRLPELRAHIDEDLDTRGATRRRVLALGIRLLDHGHFRSGGDEYADDNDSYGVATLLPEHVR
VRGSLTIFDYPAKSGVRQHFEVVDAKAARGIRGLLRINDGSHRLLRYRDGHELVEVRSDDLNQYFRSVVGGEFSVKDLRT
WHGTVLAAIEFSEMVTPPENRTQIAKATSAVMKQVGAALGNTATVARDAYVDPRVVVSYRHGRTIAPALRRAARKKPDAA
QNILDKATRHLIQRAARL
>Mature_338_residues
MRLRRSTPDAPGIARKRCGKGFAYYAANGDVLSDDATLQRIKSLAIPPAWNEVWISPHINGHIQAVGRDTAGRRQYIYHE
AWQDERAEEKFDRVLELSRRLPELRAHIDEDLDTRGATRRRVLALGIRLLDHGHFRSGGDEYADDNDSYGVATLLPEHVR
VRGSLTIFDYPAKSGVRQHFEVVDAKAARGIRGLLRINDGSHRLLRYRDGHELVEVRSDDLNQYFRSVVGGEFSVKDLRT
WHGTVLAAIEFSEMVTPPENRTQIAKATSAVMKQVGAALGNTATVARDAYVDPRVVVSYRHGRTIAPALRRAARKKPDAA
QNILDKATRHLIQRAARL

Specific function: Unknown

COG id: COG3569

COG function: function code L; Topoisomerase IB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37991; Mature: 37991

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLRRSTPDAPGIARKRCGKGFAYYAANGDVLSDDATLQRIKSLAIPPAWNEVWISPHIN
CCCCCCCCCCCCHHHHHHCCCEEEEECCCCEECCHHHHHHHHHHCCCCCCCCEEECCCCC
GHIQAVGRDTAGRRQYIYHEAWQDERAEEKFDRVLELSRRLPELRAHIDEDLDTRGATRR
CEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHH
RVLALGIRLLDHGHFRSGGDEYADDNDSYGVATLLPEHVRVRGSLTIFDYPAKSGVRQHF
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCHHHHEEEEEEEEEECCCHHHHHHHH
EVVDAKAARGIRGLLRINDGSHRLLRYRDGHELVEVRSDDLNQYFRSVVGGEFSVKDLRT
HHHHHHHHHCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
WHGTVLAAIEFSEMVTPPENRTQIAKATSAVMKQVGAALGNTATVARDAYVDPRVVVSYR
HCCCEEEEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEEEC
HGRTIAPALRRAARKKPDAAQNILDKATRHLIQRAARL
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRLRRSTPDAPGIARKRCGKGFAYYAANGDVLSDDATLQRIKSLAIPPAWNEVWISPHIN
CCCCCCCCCCCCHHHHHHCCCEEEEECCCCEECCHHHHHHHHHHCCCCCCCCEEECCCCC
GHIQAVGRDTAGRRQYIYHEAWQDERAEEKFDRVLELSRRLPELRAHIDEDLDTRGATRR
CEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHH
RVLALGIRLLDHGHFRSGGDEYADDNDSYGVATLLPEHVRVRGSLTIFDYPAKSGVRQHF
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCHHHHEEEEEEEEEECCCHHHHHHHH
EVVDAKAARGIRGLLRINDGSHRLLRYRDGHELVEVRSDDLNQYFRSVVGGEFSVKDLRT
HHHHHHHHHCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
WHGTVLAAIEFSEMVTPPENRTQIAKATSAVMKQVGAALGNTATVARDAYVDPRVVVSYR
HCCCEEEEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEEEC
HGRTIAPALRRAARKKPDAAQNILDKATRHLIQRAARL
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA