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The map label for this gene is apa [H]

Identifier: 169629522

GI number: 169629522

Start: 2492525

End: 2493559

Strand: Direct

Name: apa [H]

Synonym: MAB_2436

Alternate gene names: 169629522

Gene position: 2492525-2493559 (Clockwise)

Preceding gene: 169629521

Following gene: 169629524

Centisome position: 49.19

GC content: 72.37

Gene sequence:

>1035_bases
ATGCAGCAACCACGGGCAACATCGGCGGCGAAGCGGACGCACCGGGCGCGGGTGATAGCGGCGACCATCGCGGTCACCTC
GCTGTCCGGGGCGGGGGCGTACACCCTCGCTGCCACGCCGGTCGACCAGGCGCCGGCCACGGTGCGCACGGCGAATATCC
ATCTGGTGACCACCGATGCGCCTCCGCCGCCCGCGCCGCCGGCAACGCCCGCTCCGGGGCAGCCGGCGCCGAACCCGGAG
ACCCCCACCACGGTGACGACGCCTCCGCCCGCACCGGCACCTGGCCAACCGGCGCCGCCCACCCCACCGCCTGCCCCGGG
CGCCCCGGCAGATGGCGGACGGGTCAACAATGACCAAGGCGGATTCAGTTTCGTTGTGCCCCAAGGTTGGGTGCAGTCGG
ACGCCCGCAGGTTGACGTACGGGTCGGCACTGCTGACCAATCCCGCCGCACCCAACGGCAGCATCCTGCTGGGACGGTTG
GACCTCAAGCTATTCGCCGGCGCCGAGCCCGACAACCAGAAGGCTGCGCGCAGGCTTGCCTCGGACATGGGCGAGTTCTT
CATGCCCTATCCGGGCAACCGCGTGAACCAGGAAGACCAGAGCTTTGACGTCGCCGGTATGTCCGCGGCTTCGTCGTATT
ACGAGGTCAAATTCGATGACGCCGCCAAGGAGCCCGGCCAAATCTGGGCTGCCGCGGTGGGTAAGGGCAAGGACCGCTGG
TTCATCGTCTGGCTCGGCACCGCGGCGTCGCCCGTCGACAAGGGCGTGGCGAAGGCGTTGACCGAGTCGATCCGTCCGTG
GACCCCGCCCACTCCGCCGACACCCTCGGCCGCCCCGCCGGCCGACCCCAATCAGCCCGCCCCGCCGCCCGCGGACCCGA
ATCAGCCGCCACCGCCGCCGGCTGATCCGAACCAGCCGCCGGCTCCTCCGGCGCCCACGGCACCGGCGGCTCCCGCAGCC
GAGCCCGCAGCGCCAGGACAGCCCGCACCGCCGACGCCACCCGCGGCACCGCCCGCACCCGGCGTGCCGGTCTAG

Upstream 100 bases:

>100_bases
AATAATCGCGCATGGGCGCAAACCGTGGCTTTCGGCGAATCGGGCGCGCCGATTGCCGGATACGCTTGCACGCGCACGAC
AAACCGGTACGTTCATTGGC

Downstream 100 bases:

>100_bases
CGCGTACGCACTTCACCGTCGGTTAGCTGTGAAACCGACGGTGAAGTGCGCAATGGCGCGGGTGGTCGACGGGTCAAGCC
AGCGAACTGGCGGTAATTCA

Product: hypothetical protein

Products: NA

Alternate protein names: 45/47 kDa antigen; FAP-B; Fibronectin attachment protein [H]

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MQQPRATSAAKRTHRARVIAATIAVTSLSGAGAYTLAATPVDQAPATVRTANIHLVTTDAPPPPAPPATPAPGQPAPNPE
TPTTVTTPPPAPAPGQPAPPTPPPAPGAPADGGRVNNDQGGFSFVVPQGWVQSDARRLTYGSALLTNPAAPNGSILLGRL
DLKLFAGAEPDNQKAARRLASDMGEFFMPYPGNRVNQEDQSFDVAGMSAASSYYEVKFDDAAKEPGQIWAAAVGKGKDRW
FIVWLGTAASPVDKGVAKALTESIRPWTPPTPPTPSAAPPADPNQPAPPPADPNQPPPPPADPNQPPAPPAPTAPAAPAA
EPAAPGQPAPPTPPAAPPAPGVPV

Sequences:

>Translated_344_residues
MQQPRATSAAKRTHRARVIAATIAVTSLSGAGAYTLAATPVDQAPATVRTANIHLVTTDAPPPPAPPATPAPGQPAPNPE
TPTTVTTPPPAPAPGQPAPPTPPPAPGAPADGGRVNNDQGGFSFVVPQGWVQSDARRLTYGSALLTNPAAPNGSILLGRL
DLKLFAGAEPDNQKAARRLASDMGEFFMPYPGNRVNQEDQSFDVAGMSAASSYYEVKFDDAAKEPGQIWAAAVGKGKDRW
FIVWLGTAASPVDKGVAKALTESIRPWTPPTPPTPSAAPPADPNQPAPPPADPNQPPPPPADPNQPPAPPAPTAPAAPAA
EPAAPGQPAPPTPPAAPPAPGVPV
>Mature_344_residues
MQQPRATSAAKRTHRARVIAATIAVTSLSGAGAYTLAATPVDQAPATVRTANIHLVTTDAPPPPAPPATPAPGQPAPNPE
TPTTVTTPPPAPAPGQPAPPTPPPAPGAPADGGRVNNDQGGFSFVVPQGWVQSDARRLTYGSALLTNPAAPNGSILLGRL
DLKLFAGAEPDNQKAARRLASDMGEFFMPYPGNRVNQEDQSFDVAGMSAASSYYEVKFDDAAKEPGQIWAAAVGKGKDRW
FIVWLGTAASPVDKGVAKALTESIRPWTPPTPPTPSAAPPADPNQPAPPPADPNQPPPPPADPNQPPAPPAPTAPAAPAA
EPAAPGQPAPPTPPAAPPAPGVPV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the apa family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010801 [H]

Pfam domain/function: PF07174 FAP [H]

EC number: NA

Molecular weight: Translated: 34861; Mature: 34861

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQPRATSAAKRTHRARVIAATIAVTSLSGAGAYTLAATPVDQAPATVRTANIHLVTTDA
CCCCCHHHHHHHHHHHHEEEEEEEEECCCCCCEEEEEECCCCCCCCEEEEEEEEEEECCC
PPPPAPPATPAPGQPAPNPETPTTVTTPPPAPAPGQPAPPTPPPAPGAPADGGRVNNDQG
CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GFSFVVPQGWVQSDARRLTYGSALLTNPAAPNGSILLGRLDLKLFAGAEPDNQKAARRLA
CEEEECCCCHHHHHHHHEEECCCEECCCCCCCCCEEEEEEEEEEEECCCCCHHHHHHHHH
SDMGEFFMPYPGNRVNQEDQSFDVAGMSAASSYYEVKFDDAAKEPGQIWAAAVGKGKDRW
HHHHHEECCCCCCCCCCCCCCEEECCHHCCCCEEEEEECCCCCCCCCEEEEHHCCCCCCE
FIVWLGTAASPVDKGVAKALTESIRPWTPPTPPTPSAAPPADPNQPAPPPADPNQPPPPP
EEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ADPNQPPAPPAPTAPAAPAAEPAAPGQPAPPTPPAAPPAPGVPV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQQPRATSAAKRTHRARVIAATIAVTSLSGAGAYTLAATPVDQAPATVRTANIHLVTTDA
CCCCCHHHHHHHHHHHHEEEEEEEEECCCCCCEEEEEECCCCCCCCEEEEEEEEEEECCC
PPPPAPPATPAPGQPAPNPETPTTVTTPPPAPAPGQPAPPTPPPAPGAPADGGRVNNDQG
CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GFSFVVPQGWVQSDARRLTYGSALLTNPAAPNGSILLGRLDLKLFAGAEPDNQKAARRLA
CEEEECCCCHHHHHHHHEEECCCEECCCCCCCCCEEEEEEEEEEEECCCCCHHHHHHHHH
SDMGEFFMPYPGNRVNQEDQSFDVAGMSAASSYYEVKFDDAAKEPGQIWAAAVGKGKDRW
HHHHHEECCCCCCCCCCCCCCEEECCHHCCCCEEEEEECCCCCCCCCEEEEHHCCCCCCE
FIVWLGTAASPVDKGVAKALTESIRPWTPPTPPTPSAAPPADPNQPAPPPADPNQPPPPP
EEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ADPNQPPAPPAPTAPAAPAAEPAAPGQPAPPTPPAAPPAPGVPV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]