| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629485
Identifier: 169629485
GI number: 169629485
Start: 2456042
End: 2457010
Strand: Direct
Name: 169629485
Synonym: MAB_2399
Alternate gene names: NA
Gene position: 2456042-2457010 (Clockwise)
Preceding gene: 169629484
Following gene: 169629486
Centisome position: 48.47
GC content: 66.36
Gene sequence:
>969_bases ATGGACGCACAGGACACCTCGGCGAACGGCAAAGAGCCCCAGATACACGGCACCGGCCCGCACCTCATGGGTGGTTTCGA GCCGGAGGAGGGGCTGGGCCACCACAGCGCCAACCGGCCCAAGCGCAATCCGGTGCCCTCGCTACTGCGCACATTGCTTT CCGATCATCTGGACGCCGGATATCTGGAGGCCGCCCAGGCCCGCAAGAACGGGGCCAAGCCGCGCTCGCGGCTGGCCGAA TGGGGCTGGCAGGCAATCGCGGCCATCGCCATCGCGGTGGTCTTTGCCGCGGCAGTCGCTCAGACCACGCGTATCGCCCC CGGCATGAAGCAGGAGAAGCAGGGCCTACTGGCCAGCATCCGCAGTGAACAGCGCGATTCCGGCGCGCTGGAGTCCACCC GCGACCGGCTCTCGTCCGAGGTCGCCGGCGCGCGGCGCAGTCAGCTGGAAGGCAATGAACAGGGTAAGGAACTCCTGAAT CGGTTGGACCAGTTGGGCCTTGCCGCGGCGTCCACGGAGGTGCGCGGGCCCGCGCTCGTCGTCACGCTGGCCGATCCCGG CAGCGGCGGTGATCTCTCGGATGTCTCCAAGGAGCGCATACCGCGCAGCCAGCAGGTCATCCTGGACAGGGATATGCAGC TCGTCGTGAATTCGCTCTGGACCAGTGGCGCAGAGGCGATTTCGGTCTCCGATGTGCGAATCGGCCCGAACGTGACGATG CGGCAGGCCGGGGGAGCGATCCTGGTCGACAACCAGCCCACGAGCTCCCCCTATCGGATCGTGGCGATCGGCCCGGCTAA TACCATCAAGTCCGCGTTCGAGCGCAGTCCGGGGATGGCCCGAATGCGGTTGCTGCAGAAGTCGTATGGCATTCGACTCA CCCTCGCTACCCAGGAGAACGTGCAGATGGCCCCGGCGGCCAGTCGGGATGTCAAATACGCCAAAGAGATTCCGGCGGGC AACCGGTGA
Upstream 100 bases:
>100_bases TTCCTCATCTGGGGCTTGGGCATGTACTTGTGGACGTTCGTGCTCTACGTCGCGCAGATCGTGATGATCGTGCGACGACT GCCGAAGGTGGACACCTGAC
Downstream 100 bases:
>100_bases GGTGGACCCGACCGTGATGTGGAGAGGAAGTGGACGATGATCGGCATAGTCGCGCTGGCGATCGGCGTGGTACTGGGGTT GGTGTTTCACCCGAACGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MDAQDTSANGKEPQIHGTGPHLMGGFEPEEGLGHHSANRPKRNPVPSLLRTLLSDHLDAGYLEAAQARKNGAKPRSRLAE WGWQAIAAIAIAVVFAAAVAQTTRIAPGMKQEKQGLLASIRSEQRDSGALESTRDRLSSEVAGARRSQLEGNEQGKELLN RLDQLGLAAASTEVRGPALVVTLADPGSGGDLSDVSKERIPRSQQVILDRDMQLVVNSLWTSGAEAISVSDVRIGPNVTM RQAGGAILVDNQPTSSPYRIVAIGPANTIKSAFERSPGMARMRLLQKSYGIRLTLATQENVQMAPAASRDVKYAKEIPAG NR
Sequences:
>Translated_322_residues MDAQDTSANGKEPQIHGTGPHLMGGFEPEEGLGHHSANRPKRNPVPSLLRTLLSDHLDAGYLEAAQARKNGAKPRSRLAE WGWQAIAAIAIAVVFAAAVAQTTRIAPGMKQEKQGLLASIRSEQRDSGALESTRDRLSSEVAGARRSQLEGNEQGKELLN RLDQLGLAAASTEVRGPALVVTLADPGSGGDLSDVSKERIPRSQQVILDRDMQLVVNSLWTSGAEAISVSDVRIGPNVTM RQAGGAILVDNQPTSSPYRIVAIGPANTIKSAFERSPGMARMRLLQKSYGIRLTLATQENVQMAPAASRDVKYAKEIPAG NR >Mature_322_residues MDAQDTSANGKEPQIHGTGPHLMGGFEPEEGLGHHSANRPKRNPVPSLLRTLLSDHLDAGYLEAAQARKNGAKPRSRLAE WGWQAIAAIAIAVVFAAAVAQTTRIAPGMKQEKQGLLASIRSEQRDSGALESTRDRLSSEVAGARRSQLEGNEQGKELLN RLDQLGLAAASTEVRGPALVVTLADPGSGGDLSDVSKERIPRSQQVILDRDMQLVVNSLWTSGAEAISVSDVRIGPNVTM RQAGGAILVDNQPTSSPYRIVAIGPANTIKSAFERSPGMARMRLLQKSYGIRLTLATQENVQMAPAASRDVKYAKEIPAG NR
Specific function: Unknown
COG id: COG3879
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0749 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010273 [H]
Pfam domain/function: PF05949 DUF881 [H]
EC number: NA
Molecular weight: Translated: 34388; Mature: 34388
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAQDTSANGKEPQIHGTGPHLMGGFEPEEGLGHHSANRPKRNPVPSLLRTLLSDHLDAG CCCCCCCCCCCCCEEECCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCH YLEAAQARKNGAKPRSRLAEWGWQAIAAIAIAVVFAAAVAQTTRIAPGMKQEKQGLLASI HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH RSEQRDSGALESTRDRLSSEVAGARRSQLEGNEQGKELLNRLDQLGLAAASTEVRGPALV HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEE VTLADPGSGGDLSDVSKERIPRSQQVILDRDMQLVVNSLWTSGAEAISVSDVRIGPNVTM EEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEE RQAGGAILVDNQPTSSPYRIVAIGPANTIKSAFERSPGMARMRLLQKSYGIRLTLATQEN ECCCCEEEECCCCCCCCEEEEEECCHHHHHHHHHCCCCHHHHHHHHHHCCEEEEEECCCC VQMAPAASRDVKYAKEIPAGNR CEECCCCCHHHHHHHCCCCCCC >Mature Secondary Structure MDAQDTSANGKEPQIHGTGPHLMGGFEPEEGLGHHSANRPKRNPVPSLLRTLLSDHLDAG CCCCCCCCCCCCCEEECCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCH YLEAAQARKNGAKPRSRLAEWGWQAIAAIAIAVVFAAAVAQTTRIAPGMKQEKQGLLASI HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH RSEQRDSGALESTRDRLSSEVAGARRSQLEGNEQGKELLNRLDQLGLAAASTEVRGPALV HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEE VTLADPGSGGDLSDVSKERIPRSQQVILDRDMQLVVNSLWTSGAEAISVSDVRIGPNVTM EEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEE RQAGGAILVDNQPTSSPYRIVAIGPANTIKSAFERSPGMARMRLLQKSYGIRLTLATQEN ECCCCEEEECCCCCCCCEEEEEECCHHHHHHHHHCCCCHHHHHHHHHHCCEEEEEECCCC VQMAPAASRDVKYAKEIPAGNR CEECCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]