Click here to switch to the map view.

The map label for this gene is mmgC [H]

Identifier: 169629481

GI number: 169629481

Start: 2450862

End: 2452148

Strand: Direct

Name: mmgC [H]

Synonym: MAB_2395

Alternate gene names: 169629481

Gene position: 2450862-2452148 (Clockwise)

Preceding gene: 169629480

Following gene: 169629482

Centisome position: 48.37

GC content: 62.63

Gene sequence:

>1287_bases
ATGCTCGACTGGTCACCCATCGACCTAGCGGTGCGCGACGCCGTTCGACAGTTCATCGACAAAGAGGTGCGCCCGCACGT
GGATGCCCTGGAGTCCGGAGAGATGGAGCCGTACCCCATCATCCGGAAGATGTTCGCCACCTTCGGCATTGACGCTCTCG
CCAAGGAGGGGCTGCAGAAGCAAATCGAGAAGAAGAAGGCCCGCGAGGCCGCACTCGCAGCGGGAGAGCAGCCCGCGGAA
TCCAAGAAGTCCGACGGCGGCGGGGCCATGGGACTCGCCGGCGGATCGGCCGGCATGGGCTTCGTCCTCACCAGCGAGAT
CTCGCGAGTCTGCATGGGTCTGGTCACCGGTATGGGCGTCAGCATGGGACTGACGGTGCCGACGATCGCTTCACGCGGCA
CCGCAGCGCAGATGGAGTGCTGGCTGCCCGAACTGGTCACCTACGAGAAGGTGGGTGCCTGGGCCATCACCGAACCCGAT
TCGGGCTCGGACGCGTTCGGCGGCATGAAGACCTACGTGACACGCGACGGTGAGGACTACATCCTCAACGGCCAGAAGAC
CTTCATCACCAACGGCCCCGACGCGGATGTGATTGTGGTCTACGCGAAGCTGAACGAAGGCGCCGGAAAGGATTCCGTTG
ATCCGCGGGATCGCAAGGTGCTCACCTTCGTGCTGGACAAGGGCATGGAAGGCTTCACGCAGTCGAAACCCTTCCGCAAG
ATGGGTATTCACAGCTCCCGCACCGGCCAGCTGTTCTTCGAGAACGTGCGATTGGGCAAGGACCGGCTGCTCGGCGAGAC
CGAGACCAATGATCAAGGCGACGGTCGCGACAGTGCGCGTGCCAACTTCTCGATGGAACGCATCGGAGTGGCGGCACTGG
CGCTCGGTGTCATCGAGGAGTGCCTGCGCTTGTCGCTGGACTATGCCAAGTCGCGCACCTTGTGGGGCAAGGAGATCGCT
CAGTTCCAGCTCATCCAGCTCAAACTGGCCAAGATGGAGGTGGCCCGGCTCAACGTGCGCAACATGCTGTTCCATGCCAT
CGAGAGCCTGTCGGAGAACAAGACGCCTTCTCTGGCCGAGGCCTCGGCGATCAAGCTCTACTGTTCGGAGGCGGCCACCG
ACGTCGCGATGGACGCCGTGCAACTCTTCGGCGGCAACGGCTACATGACCGAGTACCGCGTCGAACAACTCGCGCGTGAC
GCCAAGTCCCTGATGATTTACGCCGGCAGCAACGAGGTGCAGATCACCCACATAGCCAAGGGGTTGTTGGCGGACAAAGC
GCGGTAA

Upstream 100 bases:

>100_bases
TCGAAAACTCTGTTGCCCGGCTCAAGGAATTGCTGGCCAAGGAGCTCGGGTAGTCGCCCGCGTCCGCACGAACCACTTTC
ACGGAAAGAAAGCAGGACAC

Downstream 100 bases:

>100_bases
ATCGACTCGACACGCGCGCACCCCCGTATCAAGCTGGGGCGATGCGGGCGCACCTTCACGAGGATGTGGCGGAGTACTGG
GCCGCGGTCGGCTCGCTGTA

Product: acyl-CoA dehydrogenase FadE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MLDWSPIDLAVRDAVRQFIDKEVRPHVDALESGEMEPYPIIRKMFATFGIDALAKEGLQKQIEKKKAREAALAAGEQPAE
SKKSDGGGAMGLAGGSAGMGFVLTSEISRVCMGLVTGMGVSMGLTVPTIASRGTAAQMECWLPELVTYEKVGAWAITEPD
SGSDAFGGMKTYVTRDGEDYILNGQKTFITNGPDADVIVVYAKLNEGAGKDSVDPRDRKVLTFVLDKGMEGFTQSKPFRK
MGIHSSRTGQLFFENVRLGKDRLLGETETNDQGDGRDSARANFSMERIGVAALALGVIEECLRLSLDYAKSRTLWGKEIA
QFQLIQLKLAKMEVARLNVRNMLFHAIESLSENKTPSLAEASAIKLYCSEAATDVAMDAVQLFGGNGYMTEYRVEQLARD
AKSLMIYAGSNEVQITHIAKGLLADKAR

Sequences:

>Translated_428_residues
MLDWSPIDLAVRDAVRQFIDKEVRPHVDALESGEMEPYPIIRKMFATFGIDALAKEGLQKQIEKKKAREAALAAGEQPAE
SKKSDGGGAMGLAGGSAGMGFVLTSEISRVCMGLVTGMGVSMGLTVPTIASRGTAAQMECWLPELVTYEKVGAWAITEPD
SGSDAFGGMKTYVTRDGEDYILNGQKTFITNGPDADVIVVYAKLNEGAGKDSVDPRDRKVLTFVLDKGMEGFTQSKPFRK
MGIHSSRTGQLFFENVRLGKDRLLGETETNDQGDGRDSARANFSMERIGVAALALGVIEECLRLSLDYAKSRTLWGKEIA
QFQLIQLKLAKMEVARLNVRNMLFHAIESLSENKTPSLAEASAIKLYCSEAATDVAMDAVQLFGGNGYMTEYRVEQLARD
AKSLMIYAGSNEVQITHIAKGLLADKAR
>Mature_428_residues
MLDWSPIDLAVRDAVRQFIDKEVRPHVDALESGEMEPYPIIRKMFATFGIDALAKEGLQKQIEKKKAREAALAAGEQPAE
SKKSDGGGAMGLAGGSAGMGFVLTSEISRVCMGLVTGMGVSMGLTVPTIASRGTAAQMECWLPELVTYEKVGAWAITEPD
SGSDAFGGMKTYVTRDGEDYILNGQKTFITNGPDADVIVVYAKLNEGAGKDSVDPRDRKVLTFVLDKGMEGFTQSKPFRK
MGIHSSRTGQLFFENVRLGKDRLLGETETNDQGDGRDSARANFSMERIGVAALALGVIEECLRLSLDYAKSRTLWGKEIA
QFQLIQLKLAKMEVARLNVRNMLFHAIESLSENKTPSLAEASAIKLYCSEAATDVAMDAVQLFGGNGYMTEYRVEQLARD
AKSLMIYAGSNEVQITHIAKGLLADKAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI226958412, Length=439, Percent_Identity=30.9794988610478, Blast_Score=198, Evalue=7e-51,
Organism=Homo sapiens, GI226958414, Length=335, Percent_Identity=34.0298507462687, Blast_Score=198, Evalue=1e-50,
Organism=Homo sapiens, GI4557233, Length=333, Percent_Identity=34.8348348348348, Blast_Score=182, Evalue=4e-46,
Organism=Homo sapiens, GI4501857, Length=428, Percent_Identity=31.0747663551402, Blast_Score=178, Evalue=1e-44,
Organism=Homo sapiens, GI76496475, Length=321, Percent_Identity=33.6448598130841, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI4557235, Length=321, Percent_Identity=33.6448598130841, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI4501859, Length=335, Percent_Identity=31.3432835820896, Blast_Score=156, Evalue=3e-38,
Organism=Homo sapiens, GI21361497, Length=293, Percent_Identity=32.4232081911263, Blast_Score=154, Evalue=1e-37,
Organism=Homo sapiens, GI7656849, Length=297, Percent_Identity=30.3030303030303, Blast_Score=137, Evalue=3e-32,
Organism=Homo sapiens, GI4557231, Length=339, Percent_Identity=31.5634218289086, Blast_Score=135, Evalue=9e-32,
Organism=Homo sapiens, GI187960098, Length=339, Percent_Identity=31.5634218289086, Blast_Score=135, Evalue=1e-31,
Organism=Homo sapiens, GI4503943, Length=423, Percent_Identity=28.3687943262411, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI7669494, Length=377, Percent_Identity=29.7082228116711, Blast_Score=126, Evalue=4e-29,
Organism=Homo sapiens, GI48976061, Length=295, Percent_Identity=25.7627118644068, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI211971008, Length=295, Percent_Identity=25.7627118644068, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI38505218, Length=303, Percent_Identity=21.7821782178218, Blast_Score=70, Evalue=4e-12,
Organism=Escherichia coli, GI87081958, Length=273, Percent_Identity=33.6996336996337, Blast_Score=132, Evalue=5e-32,
Organism=Escherichia coli, GI1786223, Length=296, Percent_Identity=31.0810810810811, Blast_Score=119, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI17538396, Length=421, Percent_Identity=30.4038004750594, Blast_Score=196, Evalue=3e-50,
Organism=Caenorhabditis elegans, GI17508101, Length=420, Percent_Identity=29.2857142857143, Blast_Score=165, Evalue=4e-41,
Organism=Caenorhabditis elegans, GI17569725, Length=328, Percent_Identity=33.8414634146341, Blast_Score=159, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI17506239, Length=377, Percent_Identity=29.4429708222812, Blast_Score=152, Evalue=5e-37,
Organism=Caenorhabditis elegans, GI17570075, Length=421, Percent_Identity=29.6912114014252, Blast_Score=148, Evalue=5e-36,
Organism=Caenorhabditis elegans, GI17534353, Length=341, Percent_Identity=31.0850439882698, Blast_Score=147, Evalue=8e-36,
Organism=Caenorhabditis elegans, GI71985184, Length=334, Percent_Identity=31.1377245508982, Blast_Score=147, Evalue=8e-36,
Organism=Caenorhabditis elegans, GI17533517, Length=348, Percent_Identity=29.0229885057471, Blast_Score=147, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI17534899, Length=327, Percent_Identity=30.8868501529052, Blast_Score=145, Evalue=4e-35,
Organism=Caenorhabditis elegans, GI71990804, Length=272, Percent_Identity=33.0882352941176, Blast_Score=136, Evalue=3e-32,
Organism=Caenorhabditis elegans, GI17551932, Length=412, Percent_Identity=26.4563106796117, Blast_Score=132, Evalue=3e-31,
Organism=Caenorhabditis elegans, GI17505929, Length=333, Percent_Identity=29.4294294294294, Blast_Score=130, Evalue=1e-30,
Organism=Caenorhabditis elegans, GI71985192, Length=264, Percent_Identity=31.0606060606061, Blast_Score=118, Evalue=7e-27,
Organism=Caenorhabditis elegans, GI32563615, Length=237, Percent_Identity=29.535864978903, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI71982178, Length=232, Percent_Identity=28.448275862069, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI86563381, Length=278, Percent_Identity=28.0575539568345, Blast_Score=85, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI86563383, Length=278, Percent_Identity=28.0575539568345, Blast_Score=85, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI17531909, Length=254, Percent_Identity=27.1653543307087, Blast_Score=82, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17562446, Length=298, Percent_Identity=26.510067114094, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI21356377, Length=337, Percent_Identity=35.3115727002967, Blast_Score=179, Evalue=2e-45,
Organism=Drosophila melanogaster, GI21355753, Length=334, Percent_Identity=33.2335329341317, Blast_Score=177, Evalue=2e-44,
Organism=Drosophila melanogaster, GI281363737, Length=346, Percent_Identity=30.3468208092486, Blast_Score=163, Evalue=2e-40,
Organism=Drosophila melanogaster, GI24646207, Length=318, Percent_Identity=32.3899371069182, Blast_Score=157, Evalue=2e-38,
Organism=Drosophila melanogaster, GI24660351, Length=419, Percent_Identity=30.3102625298329, Blast_Score=155, Evalue=4e-38,
Organism=Drosophila melanogaster, GI24666513, Length=340, Percent_Identity=31.1764705882353, Blast_Score=152, Evalue=3e-37,
Organism=Drosophila melanogaster, GI19920834, Length=330, Percent_Identity=30.3030303030303, Blast_Score=122, Evalue=5e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 46534; Mature: 46534

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: PS00072 ACYL_COA_DH_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDWSPIDLAVRDAVRQFIDKEVRPHVDALESGEMEPYPIIRKMFATFGIDALAKEGLQK
CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHH
QIEKKKAREAALAAGEQPAESKKSDGGGAMGLAGGSAGMGFVLTSEISRVCMGLVTGMGV
HHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCC
SMGLTVPTIASRGTAAQMECWLPELVTYEKVGAWAITEPDSGSDAFGGMKTYVTRDGEDY
CCCCCCCCCCCCCCCHHHHHCCHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEEECCCCE
ILNGQKTFITNGPDADVIVVYAKLNEGAGKDSVDPRDRKVLTFVLDKGMEGFTQSKPFRK
EECCCEEEEECCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHH
MGIHSSRTGQLFFENVRLGKDRLLGETETNDQGDGRDSARANFSMERIGVAALALGVIEE
HCCCCCCCCCEEEEHHHCCHHHHCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHH
CLRLSLDYAKSRTLWGKEIAQFQLIQLKLAKMEVARLNVRNMLFHAIESLSENKTPSLAE
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
ASAIKLYCSEAATDVAMDAVQLFGGNGYMTEYRVEQLARDAKSLMIYAGSNEVQITHIAK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEEEECCCCEEEHHHHH
GLLADKAR
HHHHCCCC
>Mature Secondary Structure
MLDWSPIDLAVRDAVRQFIDKEVRPHVDALESGEMEPYPIIRKMFATFGIDALAKEGLQK
CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHH
QIEKKKAREAALAAGEQPAESKKSDGGGAMGLAGGSAGMGFVLTSEISRVCMGLVTGMGV
HHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCC
SMGLTVPTIASRGTAAQMECWLPELVTYEKVGAWAITEPDSGSDAFGGMKTYVTRDGEDY
CCCCCCCCCCCCCCCHHHHHCCHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEEECCCCE
ILNGQKTFITNGPDADVIVVYAKLNEGAGKDSVDPRDRKVLTFVLDKGMEGFTQSKPFRK
EECCCEEEEECCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHH
MGIHSSRTGQLFFENVRLGKDRLLGETETNDQGDGRDSARANFSMERIGVAALALGVIEE
HCCCCCCCCCEEEEHHHCCHHHHCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHH
CLRLSLDYAKSRTLWGKEIAQFQLIQLKLAKMEVARLNVRNMLFHAIESLSENKTPSLAE
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
ASAIKLYCSEAATDVAMDAVQLFGGNGYMTEYRVEQLARDAKSLMIYAGSNEVQITHIAK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEEEECCCCEEEHHHHH
GLLADKAR
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]