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The map label for this gene is mmpS1 [H]

Identifier: 169629388

GI number: 169629388

Start: 2352922

End: 2353311

Strand: Direct

Name: mmpS1 [H]

Synonym: MAB_2302

Alternate gene names: 169629388

Gene position: 2352922-2353311 (Clockwise)

Preceding gene: 169629387

Following gene: 169629389

Centisome position: 46.43

GC content: 55.64

Gene sequence:

>390_bases
GTGGTGTTGGTGGTCGCGGCCGCCGCATTCGGCGTCTATCGGCTCCACGGGGTATTCGGCTCCACCAACATCAATCAGGC
GGTCGGCATCAAGGATGATTCCAAGAACATCATCCCCAAGGACATCGTCTACGAAATCTTCGGTCCCGCAGGGACAAAGG
GTGAGGTGAACTATCTGGACGACAAGGCCCAGCCGCAACGTGCTGTGTTCACCACATTGCCGTGGAAGCTGACCATCACG
ACGACCATGACTTCTGTTTTTGCCAATGTCGTCGCGATGGGGGATAGCGACGAAATTGGCTGCCGCATCCTGTCCAACGG
TGAAGTCAAGGACGAACAAAACGCGTCCAACCACAACGCCCAAGTCTTCTGCATGGTGAAATCTGCATGA

Upstream 100 bases:

>100_bases
ACGCGATAAGCAGAGTCGAGTTGTTGGCCCCCTGGGCCACACGGGTGAAGGGGAACGGACGATTTTCAAGGTCTTGACGC
GGGTATGGATCCCACTAGTC

Downstream 100 bases:

>100_bases
GTACACACAGCGCTCCTACGCACGGCGCCGCTCAAAAGCCTTCGCGCATCGCGCGATTCATCCACACATTCTCTGTCCCG
ATCATTCTCGCCTGGCTGGT

Product: membrane protein MmpS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MVLVVAAAAFGVYRLHGVFGSTNINQAVGIKDDSKNIIPKDIVYEIFGPAGTKGEVNYLDDKAQPQRAVFTTLPWKLTIT
TTMTSVFANVVAMGDSDEIGCRILSNGEVKDEQNASNHNAQVFCMVKSA

Sequences:

>Translated_129_residues
MVLVVAAAAFGVYRLHGVFGSTNINQAVGIKDDSKNIIPKDIVYEIFGPAGTKGEVNYLDDKAQPQRAVFTTLPWKLTIT
TTMTSVFANVVAMGDSDEIGCRILSNGEVKDEQNASNHNAQVFCMVKSA
>Mature_129_residues
MVLVVAAAAFGVYRLHGVFGSTNINQAVGIKDDSKNIIPKDIVYEIFGPAGTKGEVNYLDDKAQPQRAVFTTLPWKLTIT
TTMTSVFANVVAMGDSDEIGCRILSNGEVKDEQNASNHNAQVFCMVKSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mmpS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008693 [H]

Pfam domain/function: PF05423 Mycobact_memb [H]

EC number: NA

Molecular weight: Translated: 13897; Mature: 13897

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLVVAAAAFGVYRLHGVFGSTNINQAVGIKDDSKNIIPKDIVYEIFGPAGTKGEVNYLD
CEEEEEEHHHHHHHEEEECCCCCCCCEECCCCCCCCCCCHHHEEEECCCCCCCCCEEECC
DKAQPQRAVFTTLPWKLTITTTMTSVFANVVAMGDSDEIGCRILSNGEVKDEQNASNHNA
CCCCCCEEEEEECCEEEEEHHHHHHHHHHHEECCCCCCCCEEEECCCCCCCCCCCCCCCC
QVFCMVKSA
EEEEEEECC
>Mature Secondary Structure
MVLVVAAAAFGVYRLHGVFGSTNINQAVGIKDDSKNIIPKDIVYEIFGPAGTKGEVNYLD
CEEEEEEHHHHHHHEEEECCCCCCCCEECCCCCCCCCCCHHHEEEECCCCCCCCCEEECC
DKAQPQRAVFTTLPWKLTITTTMTSVFANVVAMGDSDEIGCRILSNGEVKDEQNASNHNA
CCCCCCEEEEEECCEEEEEHHHHHHHHHHHEECCCCCCCCEEEECCCCCCCCCCCCCCCC
QVFCMVKSA
EEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]