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The map label for this gene is slyA [C]

Identifier: 169629379

GI number: 169629379

Start: 2341034

End: 2341489

Strand: Direct

Name: slyA [C]

Synonym: MAB_2293

Alternate gene names: 169629379

Gene position: 2341034-2341489 (Clockwise)

Preceding gene: 169629377

Following gene: 169629382

Centisome position: 46.2

GC content: 60.96

Gene sequence:

>456_bases
GTGGCGCAACAGAACCTCGACGGTAGGCCGGACATCGCAGCGTTACTGGTGCCGCTCGGCCGGTCTTTCATGCGCGCGGA
GTTACCGCTTTTGGAGACCCATGGCGTGTCGATGTGGGCGTACGCAGTACTAACGGCCTTGCGGGACAATGAGGCCAGCA
GTCAGGCCAGTCTCGCCGATGCCATCGGTGCCGACCGCACCCGCATTATCGCGGTGTTGGACGATTTGCAGGAACGGAAG
CTGATCAACCGGCAGCCCGATCCCAGCGATCGCAGAAGCAACCTGTTGTCGCTGACCCCTGCCGGACGTAAGACCGTTAC
GGCAGTGCAGAAAGCGATACAGGACAACGAGAATCGGATCCTGGCTGGGGTATCTTCCGTCGATCGCGGTGCATTCCTGC
GGGTGCTCGAGTACCTCGCGCACCTAGATGATCCGCAGTTCTCGCCCAGGAACTAA

Upstream 100 bases:

>100_bases
GTGGCGGGCAGGAGGCGGTGCCCGGTAGCCCGCATATCATGTGTTCGGGCGTATCATTTATCGATGAATATGATCATCGG
GCTTGGTTTATTCTGATCTC

Downstream 100 bases:

>100_bases
GCCGCCGAAGACACGGCCTTGGACTTCGCGATGCCGAACTGCATGTTTTCGTCAATCCGATCACGATGGAACGCAAGGAA
ATCCAGTACGTAATTGTGCC

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MAQQNLDGRPDIAALLVPLGRSFMRAELPLLETHGVSMWAYAVLTALRDNEASSQASLADAIGADRTRIIAVLDDLQERK
LINRQPDPSDRRSNLLSLTPAGRKTVTAVQKAIQDNENRILAGVSSVDRGAFLRVLEYLAHLDDPQFSPRN

Sequences:

>Translated_151_residues
MAQQNLDGRPDIAALLVPLGRSFMRAELPLLETHGVSMWAYAVLTALRDNEASSQASLADAIGADRTRIIAVLDDLQERK
LINRQPDPSDRRSNLLSLTPAGRKTVTAVQKAIQDNENRILAGVSSVDRGAFLRVLEYLAHLDDPQFSPRN
>Mature_150_residues
AQQNLDGRPDIAALLVPLGRSFMRAELPLLETHGVSMWAYAVLTALRDNEASSQASLADAIGADRTRIIAVLDDLQERKL
INRQPDPSDRRSNLLSLTPAGRKTVTAVQKAIQDNENRILAGVSSVDRGAFLRVLEYLAHLDDPQFSPRN

Specific function: May be involved in the regulation of genes for 4- hydroxybenzoyl-CoA reductase [H]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16614; Mature: 16483

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQQNLDGRPDIAALLVPLGRSFMRAELPLLETHGVSMWAYAVLTALRDNEASSQASLAD
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHH
AIGADRTRIIAVLDDLQERKLINRQPDPSDRRSNLLSLTPAGRKTVTAVQKAIQDNENRI
HHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHCCEEEECCCCHHHHHHHHHHHHCCCCEE
LAGVSSVDRGAFLRVLEYLAHLDDPQFSPRN
EECCCCCCHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
AQQNLDGRPDIAALLVPLGRSFMRAELPLLETHGVSMWAYAVLTALRDNEASSQASLAD
CCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHH
AIGADRTRIIAVLDDLQERKLINRQPDPSDRRSNLLSLTPAGRKTVTAVQKAIQDNENRI
HHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHCCEEEECCCCHHHHHHHHHHHHCCCCEE
LAGVSSVDRGAFLRVLEYLAHLDDPQFSPRN
EECCCCCCHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9490068 [H]