Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

Click here to switch to the map view.

The map label for this gene is mer [H]

Identifier: 169629200

GI number: 169629200

Start: 2112262

End: 2113107

Strand: Reverse

Name: mer [H]

Synonym: MAB_2114c

Alternate gene names: 169629200

Gene position: 2113107-2112262 (Counterclockwise)

Preceding gene: 169629205

Following gene: 169629192

Centisome position: 41.7

GC content: 64.54

Gene sequence:

>846_bases
ATGGCTCCCATGCGATACGGAATTGTGCTGACGACAGGAGATGCCGCCGACGTCGCCCAGCTGGCAACACTGGCCGAAGA
GGCGGGATGGGATGCGATCTTCGGTTGGGAACCCGTCTGGGGTGTCGACGCTTGGGTGGCATTGACCGCCGCCGCCATGC
GCACCAGCCGGATCAAGCTCGGCACCATGCTGACTCCCCTGTCACGCCGCAAACCATGGGATCTGGCGTCCACCACCGCA
ACGCTGGACCGGCTCTCCGGTGGCCGCGTCATCCTCTCCGTGGGCATGGGTGCGCTGCACGACAATTGGCTGGCCTTCGA
ACGCGATCAGGGCCGCAGGACCCGCGCCGAGCTGCTCGATGAGGGCCTAGACGTCCTGTTCGGCCTCTGGGAGGGGCAAC
CCTTCAGTTATGAGGGCAAGCACTATCAGGTAACGCCGACTGCGCATTTGGTACCCGATCCACCGGTCCAAGCGCCACGC
ATCACCACCTGGTGCGTGGGTCTGCTCGGATCGGCGAAGTCCATGTCCCGCGCGGCCCGCTGCGATGGGCTGCTGCCGAA
CATCACCACCGCCGACGGACGGTTCGACTTCAATCCACCGCTGGATCGATGGGCGGATGCCGCCCGTGAAATTCATTCAC
TGCGAAGTGAACTGGGATACGGGGACGGCTACGACGTGGTGTACGAAGCGACTACCGATTGGAGCAACCTCGATGCCACT
CGGGAGAAGATCGCGACCCTGCACGACGGCGGCTACACCTGGTATCTGGACTCGGACTGGCACACCGAGCACGACGATCC
CCTGGCCGCACTACGTGCCCGCGTCGAGATCGGGCCGCCACGTTAG

Upstream 100 bases:

>100_bases
CTCGTGGGCGAGCTCCGCGGCGAGCGCGGCATCGGAAACAGTCACCCGGTCAGTATTACCCGATCGGAATTTGTCGCACC
CCGTCGGCATACTCACGCGC

Downstream 100 bases:

>100_bases
CGATCAGTGCTTGACGTCGGTGCACAGAGTCTTTGGGGCGATATCCACGATTGAGGACACTTCCCAGCGAGGCTGAATAC
CGGGAAAGACCGTGGCGGCG

Product: luciferase-like

Products: NA

Alternate protein names: Coenzyme F420-dependent N(5),N(10)-methylenetetrahydromethanopterin reductase; Methylene-H(4)MPT reductase [H]

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MAPMRYGIVLTTGDAADVAQLATLAEEAGWDAIFGWEPVWGVDAWVALTAAAMRTSRIKLGTMLTPLSRRKPWDLASTTA
TLDRLSGGRVILSVGMGALHDNWLAFERDQGRRTRAELLDEGLDVLFGLWEGQPFSYEGKHYQVTPTAHLVPDPPVQAPR
ITTWCVGLLGSAKSMSRAARCDGLLPNITTADGRFDFNPPLDRWADAAREIHSLRSELGYGDGYDVVYEATTDWSNLDAT
REKIATLHDGGYTWYLDSDWHTEHDDPLAALRARVEIGPPR

Sequences:

>Translated_281_residues
MAPMRYGIVLTTGDAADVAQLATLAEEAGWDAIFGWEPVWGVDAWVALTAAAMRTSRIKLGTMLTPLSRRKPWDLASTTA
TLDRLSGGRVILSVGMGALHDNWLAFERDQGRRTRAELLDEGLDVLFGLWEGQPFSYEGKHYQVTPTAHLVPDPPVQAPR
ITTWCVGLLGSAKSMSRAARCDGLLPNITTADGRFDFNPPLDRWADAAREIHSLRSELGYGDGYDVVYEATTDWSNLDAT
REKIATLHDGGYTWYLDSDWHTEHDDPLAALRARVEIGPPR
>Mature_280_residues
APMRYGIVLTTGDAADVAQLATLAEEAGWDAIFGWEPVWGVDAWVALTAAAMRTSRIKLGTMLTPLSRRKPWDLASTTAT
LDRLSGGRVILSVGMGALHDNWLAFERDQGRRTRAELLDEGLDVLFGLWEGQPFSYEGKHYQVTPTAHLVPDPPVQAPRI
TTWCVGLLGSAKSMSRAARCDGLLPNITTADGRFDFNPPLDRWADAAREIHSLRSELGYGDGYDVVYEATTDWSNLDATR
EKIATLHDGGYTWYLDSDWHTEHDDPLAALRARVEIGPPR

Specific function: Catalyzes the reversible reduction of methylene-H(4)MPT to methyl-H(4)MPT [H]

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mer family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR019946 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: =1.5.99.11 [H]

Molecular weight: Translated: 31050; Mature: 30919

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPMRYGIVLTTGDAADVAQLATLAEEAGWDAIFGWEPVWGVDAWVALTAAAMRTSRIKL
CCCCEEEEEEEECCHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHEEH
GTMLTPLSRRKPWDLASTTATLDRLSGGRVILSVGMGALHDNWLAFERDQGRRTRAELLD
HHHCCCHHCCCCCCHHHHHHHHHHCCCCEEEEEECCCHHCCCCEEEECCCCCHHHHHHHH
EGLDVLFGLWEGQPFSYEGKHYQVTPTAHLVPDPPVQAPRITTWCVGLLGSAKSMSRAAR
HHHHHHHHHCCCCCCCCCCCEEEECCCEECCCCCCCCCCCHHHHHHHHHCCHHHHHHHHH
CDGLLPNITTADGRFDFNPPLDRWADAAREIHSLRSELGYGDGYDVVYEATTDWSNLDAT
HCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHH
REKIATLHDGGYTWYLDSDWHTEHDDPLAALRARVEIGPPR
HHHHHHEECCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure 
APMRYGIVLTTGDAADVAQLATLAEEAGWDAIFGWEPVWGVDAWVALTAAAMRTSRIKL
CCCEEEEEEEECCHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHEEH
GTMLTPLSRRKPWDLASTTATLDRLSGGRVILSVGMGALHDNWLAFERDQGRRTRAELLD
HHHCCCHHCCCCCCHHHHHHHHHHCCCCEEEEEECCCHHCCCCEEEECCCCCHHHHHHHH
EGLDVLFGLWEGQPFSYEGKHYQVTPTAHLVPDPPVQAPRITTWCVGLLGSAKSMSRAAR
HHHHHHHHHCCCCCCCCCCCEEEECCCEECCCCCCCCCCCHHHHHHHHHCCHHHHHHHHH
CDGLLPNITTADGRFDFNPPLDRWADAAREIHSLRSELGYGDGYDVVYEATTDWSNLDAT
HCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHH
REKIATLHDGGYTWYLDSDWHTEHDDPLAALRARVEIGPPR
HHHHHHEECCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]