| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169629192
Identifier: 169629192
GI number: 169629192
Start: 2106396
End: 2107487
Strand: Reverse
Name: 169629192
Synonym: MAB_2106c
Alternate gene names: NA
Gene position: 2107487-2106396 (Counterclockwise)
Preceding gene: 169629200
Following gene: 169629191
Centisome position: 41.59
GC content: 66.48
Gene sequence:
>1092_bases GTGGGCAATCCCAGCTCGATTGCGATGATGGACGCGATGAATCGTTTACCTCGCCGCGGGATGCGCGGTATAAGGGGCAC CGTCGCCGCGCTAGCAGTCGTCATCACGGCGGCCGCAGCCGCCTCCTCGGGCTGCTCATCCGGCGGCGATAGCGAAAATT CCGCCGATCCCCGGGTCATCACCCCGGCCTCCGCAGCGCAGTCGCCCCCTGTGACCACAGCGCCGGCCGGGACGGTGCAC CGGATCGCCGGGCAGGCCAGCGCCGTGTTGTTCGACACCTCGACCAAGACGGTGTCGATTCTGGCCGATGAAGGCCAGAT AGTGACGACGGTCACACGCGACGACCTCGACACGGTACGCCGCGTCACCAGACTTCCCTCGCCCGCGACCGCGGCCGTCG GCGATGACCGCGGCACCGTGTACCTGTCCACCGCGGGCGGCTATTTCGCCCTGGACATCGCCTCGGGTCGCGCCGACAAG GTCAACATCTCGGGCCACGAAAACACCGAGTTCTCGGCGATCACCCGGCGCCCGGACGGCCGAATCGTGTTGGGAAGCGC CGACGGCACCGTCTTTACCCTCGACCTCCAGAACCAGGTCATCGCCCACGCGGCGGGCTTCGCACATATTGATTCCCTTG CTTACCAAGGCAATACCGTCGCGGTGCTGGATCGCGCGCAAAGCTCGGTGACCACACTGACCGCGGCCGGCGATGGCACC GCGCATGCCCTGCGGGCCGGCGAGGGCGCCACCACGATGCTCGCCGATGACAAGGGCCGCCTCTTGGTGGCCGACACCCG TGGTGGTGCGCTACTGGCGTTCGGACTGGCGGATTCACTCATCCTGCGCCAGCGTTATCCGGTGCCCGGCGCCCCCTACG GGCTCGCGTACTCGGCCACGCTGATCTGGGTGTCGCAGACGGCGACAAACACGGTTATTGGCTACGATCTGTCCACCGGC ATCCCCGAGGAAAGGGCTCGATTCGCGACTGTGCGGCAACCTAATTCACTGGTCAGCGACGGATCCACACTATTTGTGGC ATCCGGGGCGGGCGACGGAATACAGGCGACCGACATCAGGAGCCTCGGATGA
Upstream 100 bases:
>100_bases TCGACGGTGAAGACCGGACTGTCGGCAAGCGTCATGGTCCTTACGATAGCCCTCAGCTACCGACTGCTAGCACCGAACGC GCCGAGAAAGTCATCTCCCG
Downstream 100 bases:
>100_bases GCCGCGCCGGGCGCGGCAGCTTTCCGGCGAGTTGGGAGAGCGAGCCCGATGACGACTACGACTACTACCCGTTGCGGCTA CCGCCGGAGATCACCAGGAT
Product: lipoprotein LppL
Products: NA
Alternate protein names: Lipoprotein LppL; Prolipoprotein LppL; SMP-30/Gluconolaconase/LRE Domain-Containing Protein; Prolipoprotein; LppL Protein
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MGNPSSIAMMDAMNRLPRRGMRGIRGTVAALAVVITAAAAASSGCSSGGDSENSADPRVITPASAAQSPPVTTAPAGTVH RIAGQASAVLFDTSTKTVSILADEGQIVTTVTRDDLDTVRRVTRLPSPATAAVGDDRGTVYLSTAGGYFALDIASGRADK VNISGHENTEFSAITRRPDGRIVLGSADGTVFTLDLQNQVIAHAAGFAHIDSLAYQGNTVAVLDRAQSSVTTLTAAGDGT AHALRAGEGATTMLADDKGRLLVADTRGGALLAFGLADSLILRQRYPVPGAPYGLAYSATLIWVSQTATNTVIGYDLSTG IPEERARFATVRQPNSLVSDGSTLFVASGAGDGIQATDIRSLG
Sequences:
>Translated_363_residues MGNPSSIAMMDAMNRLPRRGMRGIRGTVAALAVVITAAAAASSGCSSGGDSENSADPRVITPASAAQSPPVTTAPAGTVH RIAGQASAVLFDTSTKTVSILADEGQIVTTVTRDDLDTVRRVTRLPSPATAAVGDDRGTVYLSTAGGYFALDIASGRADK VNISGHENTEFSAITRRPDGRIVLGSADGTVFTLDLQNQVIAHAAGFAHIDSLAYQGNTVAVLDRAQSSVTTLTAAGDGT AHALRAGEGATTMLADDKGRLLVADTRGGALLAFGLADSLILRQRYPVPGAPYGLAYSATLIWVSQTATNTVIGYDLSTG IPEERARFATVRQPNSLVSDGSTLFVASGAGDGIQATDIRSLG >Mature_362_residues GNPSSIAMMDAMNRLPRRGMRGIRGTVAALAVVITAAAAASSGCSSGGDSENSADPRVITPASAAQSPPVTTAPAGTVHR IAGQASAVLFDTSTKTVSILADEGQIVTTVTRDDLDTVRRVTRLPSPATAAVGDDRGTVYLSTAGGYFALDIASGRADKV NISGHENTEFSAITRRPDGRIVLGSADGTVFTLDLQNQVIAHAAGFAHIDSLAYQGNTVAVLDRAQSSVTTLTAAGDGTA HALRAGEGATTMLADDKGRLLVADTRGGALLAFGLADSLILRQRYPVPGAPYGLAYSATLIWVSQTATNTVIGYDLSTGI PEERARFATVRQPNSLVSDGSTLFVASGAGDGIQATDIRSLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37131; Mature: 37000
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNPSSIAMMDAMNRLPRRGMRGIRGTVAALAVVITAAAAASSGCSSGGDSENSADPRVI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEE TPASAAQSPPVTTAPAGTVHRIAGQASAVLFDTSTKTVSILADEGQIVTTVTRDDLDTVR CCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCCEEEEEECCCEEEEEEECCHHHHHH RVTRLPSPATAAVGDDRGTVYLSTAGGYFALDIASGRADKVNISGHENTEFSAITRRPDG HHHHCCCCCEEECCCCCCEEEEEECCCEEEEEECCCCCCEEEECCCCCCCEEEEEECCCC RIVLGSADGTVFTLDLQNQVIAHAAGFAHIDSLAYQGNTVAVLDRAQSSVTTLTAAGDGT CEEEECCCCEEEEEECCCCHHHHHHCHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCC AHALRAGEGATTMLADDKGRLLVADTRGGALLAFGLADSLILRQRYPVPGAPYGLAYSAT HHEEECCCCCEEEEECCCCCEEEEECCCCEEEEECHHHHHHHHHCCCCCCCCCCEEEEEE LIWVSQTATNTVIGYDLSTGIPEERARFATVRQPNSLVSDGSTLFVASGAGDGIQATDIR EEEEECCCCCEEEEEECCCCCCHHHHHEEEECCCCHHHCCCCEEEEECCCCCCCEECCCC SLG CCC >Mature Secondary Structure GNPSSIAMMDAMNRLPRRGMRGIRGTVAALAVVITAAAAASSGCSSGGDSENSADPRVI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEE TPASAAQSPPVTTAPAGTVHRIAGQASAVLFDTSTKTVSILADEGQIVTTVTRDDLDTVR CCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCCEEEEEECCCEEEEEEECCHHHHHH RVTRLPSPATAAVGDDRGTVYLSTAGGYFALDIASGRADKVNISGHENTEFSAITRRPDG HHHHCCCCCEEECCCCCCEEEEEECCCEEEEEECCCCCCEEEECCCCCCCEEEEEECCCC RIVLGSADGTVFTLDLQNQVIAHAAGFAHIDSLAYQGNTVAVLDRAQSSVTTLTAAGDGT CEEEECCCCEEEEEECCCCHHHHHHCHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCC AHALRAGEGATTMLADDKGRLLVADTRGGALLAFGLADSLILRQRYPVPGAPYGLAYSAT HHEEECCCCCEEEEECCCCCEEEEECCCCEEEEECHHHHHHHHHCCCCCCCCCCEEEEEE LIWVSQTATNTVIGYDLSTGIPEERARFATVRQPNSLVSDGSTLFVASGAGDGIQATDIR EEEEECCCCCEEEEEECCCCCCHHHHHEEEECCCCHHHCCCCEEEEECCCCCCCEECCCC SLG CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA