| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629156
Identifier: 169629156
GI number: 169629156
Start: 2069564
End: 2070196
Strand: Reverse
Name: 169629156
Synonym: MAB_2070c
Alternate gene names: NA
Gene position: 2070196-2069564 (Counterclockwise)
Preceding gene: 169629172
Following gene: 169629154
Centisome position: 40.86
GC content: 63.67
Gene sequence:
>633_bases GTGCGGTCGAGAAATAAGCGCTGGGGTGGTCGGACCGGGGCCGAGCGTCGTGCAGAACGACGGCAGCAATTGATCGAGGC CGCAACCGAGATTTGGAGTGAGAGCGGTTGGGCCGCGGTCACTATGCGCGGAGTATGCGCCCGCACAAGCCTGAACGATC GGTACTTCTACGAGGACTTCAAGACGCGCGACGAGCTGCTCGTTGCTGCGTGGGATGGCGTCCGCAATGACATGCTCGGC GAGGTCGCCGCGCTCTTCACCGAGCGTGCGAATCGGCCGCCGATCGAGACAATCACCGCAGCGATAGCCATCGTGGTCGA TGGGATCGCACGCGATCCCGGCCGAGCGCACATCCTCCTCGCTCAGCATGTCGGTAGCTCACCGCTACAAGACCGCCGCG CGGTGGCGCTCCAGGAGGCAACGCAGTTGGTCGTTGAGGCAAGCCGGCCACACCTCCGACACGATGCCGACGAGATGGCC CTTCGCATGGACACCCTGATCGCCGTCGGGGGGTTCGTCGAAGTCATCACCGCCTGGCACTCGGGTTTGCTTGCGGTGAC CGAGAAAGAAGTGGTCGCGCACACCAGCAGACTTGCTGAAACCCTGGCTCAACGCTATGTCGTCAGCGACTGA
Upstream 100 bases:
>100_bases CGTGTGATGTGGGGGAACTCTCATCTGGGGGCATCAGCCACCATTGGTGTCGCATGCCACCAGTTTTGTCATGCACCGGG CGCTTTGTCAAGATGGAGAG
Downstream 100 bases:
>100_bases TCGAGGCTCACGACAGGGCCAGCCAGCCCCGTGGCGATCGCTGCGAACTGCATTTGCGGTCCCGACCACCGCCTTCACCG GCCACCTAGCACCGAATCCG
Product: putative transcriptional regulator
Products: NA
Alternate protein names: Tetr Family Transcriptional Regulator
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MRSRNKRWGGRTGAERRAERRQQLIEAATEIWSESGWAAVTMRGVCARTSLNDRYFYEDFKTRDELLVAAWDGVRNDMLG EVAALFTERANRPPIETITAAIAIVVDGIARDPGRAHILLAQHVGSSPLQDRRAVALQEATQLVVEASRPHLRHDADEMA LRMDTLIAVGGFVEVITAWHSGLLAVTEKEVVAHTSRLAETLAQRYVVSD
Sequences:
>Translated_210_residues MRSRNKRWGGRTGAERRAERRQQLIEAATEIWSESGWAAVTMRGVCARTSLNDRYFYEDFKTRDELLVAAWDGVRNDMLG EVAALFTERANRPPIETITAAIAIVVDGIARDPGRAHILLAQHVGSSPLQDRRAVALQEATQLVVEASRPHLRHDADEMA LRMDTLIAVGGFVEVITAWHSGLLAVTEKEVVAHTSRLAETLAQRYVVSD >Mature_210_residues MRSRNKRWGGRTGAERRAERRQQLIEAATEIWSESGWAAVTMRGVCARTSLNDRYFYEDFKTRDELLVAAWDGVRNDMLG EVAALFTERANRPPIETITAAIAIVVDGIARDPGRAHILLAQHVGSSPLQDRRAVALQEATQLVVEASRPHLRHDADEMA LRMDTLIAVGGFVEVITAWHSGLLAVTEKEVVAHTSRLAETLAQRYVVSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23370; Mature: 23370
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSRNKRWGGRTGAERRAERRQQLIEAATEIWSESGWAAVTMRGVCARTSLNDRYFYEDF CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHCCCCCCHHHHHH KTRDELLVAAWDGVRNDMLGEVAALFTERANRPPIETITAAIAIVVDGIARDPGRAHILL CCHHHEEEEHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEE AQHVGSSPLQDRRAVALQEATQLVVEASRPHLRHDADEMALRMDTLIAVGGFVEVITAWH EHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHH SGLLAVTEKEVVAHTSRLAETLAQRYVVSD CCCEEEHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRSRNKRWGGRTGAERRAERRQQLIEAATEIWSESGWAAVTMRGVCARTSLNDRYFYEDF CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHCCCCCCHHHHHH KTRDELLVAAWDGVRNDMLGEVAALFTERANRPPIETITAAIAIVVDGIARDPGRAHILL CCHHHEEEEHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEE AQHVGSSPLQDRRAVALQEATQLVVEASRPHLRHDADEMALRMDTLIAVGGFVEVITAWH EHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHH SGLLAVTEKEVVAHTSRLAETLAQRYVVSD CCCEEEHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA