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The map label for this gene is ynfM [H]

Identifier: 169629125

GI number: 169629125

Start: 2039304

End: 2040533

Strand: Direct

Name: ynfM [H]

Synonym: MAB_2038

Alternate gene names: 169629125

Gene position: 2039304-2040533 (Clockwise)

Preceding gene: 169629124

Following gene: 169629126

Centisome position: 40.25

GC content: 56.18

Gene sequence:

>1230_bases
ATGCCTGCCGCCGAATCACAGCAGGATGACACCGCACACAGAATCCGTGCCGAGTCCCGAGAGTTTCGGATCGCGGCTGT
GGGTCTGCTCCTGGCCTCGATGATCGGCCCCGCACAGCTGTATTGCATTCAGGGAATTCTGCCGCAGATCGCGCAGGGAC
TGCATATCTCTGAGGGTGACAGCAGACTGGTTTTCCTGGCTGCCTTTGCCGGTTTCGCCGTCGGATTGATCCCCATCAGT
CTATTGTCTGAACGCTATGGTCGGCGCAGCATTCTCTTGATGTCGTCAACGCTTGCGACGTTGATCTGCCTACTTCTGGT
GTTCTGCCATGACCTCACGGAAATCGTCTTACTCAGAGGGCTCCAAGGCGTCCTCTTGGCCGGTGTTTCCGCCATTTTGA
TGGCATACATAGGGGAGGAGTTCGAGCCCCCGGCCGTTACCCCCGCGATGGGGATCTACGCTGCCGGAAATGCTCTCGGG
TCGCTCTTGGGTCAAATGCTGCCAGCTTGGATCGTGGGGGGTACGGGTTCATGGAGGCTGGCGCTTGGCGTGCTGGCCGT
GCTCTTGCTTGTGGTCGTCATGATTTCTGGCATGACACTCCCGCGTTCGAAATTCTTCGTACCCAGCGCGATTTCCTACA
TCAAAGAATCTGGACTCTTCCTCTCTCACCTTTCAAACCGCCGGTTACTCGTCATCTACCTGCTGGTTTTTTGCTTCATG
GGCGCGATTATTTCTATATTCAATGCCTTGCCCTTTAGAATGGAATCGCCACCGTTCAATATATCCCCGAGTGTGTACGG
CACATTTTTTCTGGTTATCCTGGCGGGCGTTTTCGCCGCGAAGGCCTCGGGCGCCGTGGCCGCGAGAATCGGAATCAGAA
TAACGCTGCTGCTGTCTGTTGTCTTGATGATGGCCGGAGTTGCGCTTCTAGCTATTCCCACTGTCTGGATCATTGTTATC
GGAGCAGCGCTTGTCACCGCAGGCGCTTTTGCCGGTTACACGTGCCTGACTAGTCTGTCGGCAAAAATCGCGGATAGAGG
TAGGGCTCAGGCATCGGCGCTTTTTCTCGCGTCGAGCTTCACGGGGAGCGCGATGTTGGGACTAATCGGTAGCCGTGTGC
TCACTGATACAGGGTGGAACGGCCTATTGGCATACATCAGCGGGCTGATGGGGCTTGGTTTCTTTTTGGCGCTGACCGTC
CGCGACACAACATCCGAGGACACCGAGTAG

Upstream 100 bases:

>100_bases
TTTTGGGCCCATGGTTCTGGTGGCCGCGGGTCGTGCGTTGGCGCCCGGCGCATGCATCTGGGGCGGTGCTCACGAGCGCG
CCGAAAGGAACGTGATTCCT

Downstream 100 bases:

>100_bases
AAGGTAGGAAATCGTGACCAGCCCCGTTGACCCGCTCCTGATGTCAGTCCTCGAGGCGAGCCCAGCGGTACAGCTCGATC
GGCCCGAGGATTTGACCCTG

Product: putative transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 408

Protein sequence:

>409_residues
MPAAESQQDDTAHRIRAESREFRIAAVGLLLASMIGPAQLYCIQGILPQIAQGLHISEGDSRLVFLAAFAGFAVGLIPIS
LLSERYGRRSILLMSSTLATLICLLLVFCHDLTEIVLLRGLQGVLLAGVSAILMAYIGEEFEPPAVTPAMGIYAAGNALG
SLLGQMLPAWIVGGTGSWRLALGVLAVLLLVVVMISGMTLPRSKFFVPSAISYIKESGLFLSHLSNRRLLVIYLLVFCFM
GAIISIFNALPFRMESPPFNISPSVYGTFFLVILAGVFAAKASGAVAARIGIRITLLLSVVLMMAGVALLAIPTVWIIVI
GAALVTAGAFAGYTCLTSLSAKIADRGRAQASALFLASSFTGSAMLGLIGSRVLTDTGWNGLLAYISGLMGLGFFLALTV
RDTTSEDTE

Sequences:

>Translated_409_residues
MPAAESQQDDTAHRIRAESREFRIAAVGLLLASMIGPAQLYCIQGILPQIAQGLHISEGDSRLVFLAAFAGFAVGLIPIS
LLSERYGRRSILLMSSTLATLICLLLVFCHDLTEIVLLRGLQGVLLAGVSAILMAYIGEEFEPPAVTPAMGIYAAGNALG
SLLGQMLPAWIVGGTGSWRLALGVLAVLLLVVVMISGMTLPRSKFFVPSAISYIKESGLFLSHLSNRRLLVIYLLVFCFM
GAIISIFNALPFRMESPPFNISPSVYGTFFLVILAGVFAAKASGAVAARIGIRITLLLSVVLMMAGVALLAIPTVWIIVI
GAALVTAGAFAGYTCLTSLSAKIADRGRAQASALFLASSFTGSAMLGLIGSRVLTDTGWNGLLAYISGLMGLGFFLALTV
RDTTSEDTE
>Mature_408_residues
PAAESQQDDTAHRIRAESREFRIAAVGLLLASMIGPAQLYCIQGILPQIAQGLHISEGDSRLVFLAAFAGFAVGLIPISL
LSERYGRRSILLMSSTLATLICLLLVFCHDLTEIVLLRGLQGVLLAGVSAILMAYIGEEFEPPAVTPAMGIYAAGNALGS
LLGQMLPAWIVGGTGSWRLALGVLAVLLLVVVMISGMTLPRSKFFVPSAISYIKESGLFLSHLSNRRLLVIYLLVFCFMG
AIISIFNALPFRMESPPFNISPSVYGTFFLVILAGVFAAKASGAVAARIGIRITLLLSVVLMMAGVALLAIPTVWIIVIG
AALVTAGAFAGYTCLTSLSAKIADRGRAQASALFLASSFTGSAMLGLIGSRVLTDTGWNGLLAYISGLMGLGFFLALTVR
DTTSEDTE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=392, Percent_Identity=28.3163265306122, Blast_Score=174, Evalue=7e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43139; Mature: 43008

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAAESQQDDTAHRIRAESREFRIAAVGLLLASMIGPAQLYCIQGILPQIAQGLHISEGD
CCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCC
SRLVFLAAFAGFAVGLIPISLLSERYGRRSILLMSSTLATLICLLLVFCHDLTEIVLLRG
CCEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LQGVLLAGVSAILMAYIGEEFEPPAVTPAMGIYAAGNALGSLLGQMLPAWIVGGTGSWRL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHH
ALGVLAVLLLVVVMISGMTLPRSKFFVPSAISYIKESGLFLSHLSNRRLLVIYLLVFCFM
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHH
GAIISIFNALPFRMESPPFNISPSVYGTFFLVILAGVFAAKASGAVAARIGIRITLLLSV
HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
VLMMAGVALLAIPTVWIIVIGAALVTAGAFAGYTCLTSLSAKIADRGRAQASALFLASSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
TGSAMLGLIGSRVLTDTGWNGLLAYISGLMGLGFFLALTVRDTTSEDTE
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCC
>Mature Secondary Structure 
PAAESQQDDTAHRIRAESREFRIAAVGLLLASMIGPAQLYCIQGILPQIAQGLHISEGD
CCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCC
SRLVFLAAFAGFAVGLIPISLLSERYGRRSILLMSSTLATLICLLLVFCHDLTEIVLLRG
CCEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LQGVLLAGVSAILMAYIGEEFEPPAVTPAMGIYAAGNALGSLLGQMLPAWIVGGTGSWRL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHH
ALGVLAVLLLVVVMISGMTLPRSKFFVPSAISYIKESGLFLSHLSNRRLLVIYLLVFCFM
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHH
GAIISIFNALPFRMESPPFNISPSVYGTFFLVILAGVFAAKASGAVAARIGIRITLLLSV
HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
VLMMAGVALLAIPTVWIIVIGAALVTAGAFAGYTCLTSLSAKIADRGRAQASALFLASSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
TGSAMLGLIGSRVLTDTGWNGLLAYISGLMGLGFFLALTVRDTTSEDTE
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]