| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is mmpL4 [H]
Identifier: 169629124
GI number: 169629124
Start: 2036419
End: 2039298
Strand: Direct
Name: mmpL4 [H]
Synonym: MAB_2037
Alternate gene names: 169629124
Gene position: 2036419-2039298 (Clockwise)
Preceding gene: 169629123
Following gene: 169629125
Centisome position: 40.19
GC content: 57.78
Gene sequence:
>2880_bases GTGGGTAACAAGCATGTGGGGCGCGACCGCGGCGAAAGGCGCCCTTTCGTCGCGCACGCTGTTCGGGTGCTCGCGATCCC GATCGTCCTCTTCTGGGTCGGCGTCGCGGTGCTGCTCAGCGTGTTGGTCCCCAAGCTCGATGGCGTGACAAAGCAACACG CGGGGCCGATGGTTCCCCTGGATGCGCCTTCGCAGCGCGCAATGCTGCACATTGGTGAGAAGTTTCAAGAATCGACTTCC ACGAGCCTCGCCTACATCCTGCTGGAGACCGAGGGCCGAATACTGGGGGATGCCGACCACAAGTACTACGACGAGTTAAT CCGTTTGCTCGACGCGGACAAGCAGCATGTTCAGTTCATCATGAACATGTGGGGTAAGCCGATCACGGCCGCGGGCAGTC AGAGCCCCGACAACAAGGCCGCCTACGTGATGCTGCGTTTGGTCGGCGATATCGGCGAGGCCGCCGCCAACGAGTCCACC ATCGCACTGCGCAAGACGGTGCAAGATACTCTTCAACGCACTCCGCCTCCGCCCGGACTACGTGTATACGTCTCGGGGGC GGCGCCGCTGTCTGCGGACCTGCTTGACGCCGGCGACAAAAGTATGAAGCGGGTGCTGCTTTTTACGATTGCCGTCATCA TCATCATGCTCGTCCTGGTTTACCGCTCCATTGCATGCGTAGTGCTGATATTACTCACCGTCGCCTTCGAATTCACGGTA TCCAACGGCATTGTTTCCTTTTTCGTGGTGCACAACATCATTGGCATATCGACATTCGCGACCAGCATGGTCGAATCACT TATCATCGCGGCCGGAACAGATTACGGCATCTTTCTGCTCGGCAGGTATCACGAGGCACGCAATGCGGGCGAGGATCGGG ACCGTGCGTTTTACACCACGTTTCACGGCGTATCGCACGTCATTCTGGGGTCGGGGCTCACCATCGCGGGGGCATGTCTA TGCCTCGGTTTTGCGCGACTTGGCTACTTCAACACGATGGGGCCGGCCTGCGCCATCGCGATGTTGGTGACGGTCGCGGC AGCTTTGACGCTCGGCCCGGCCCTGCTGGCAATTGCCAGTAAATTTGGCCTTCTCGACCCGAAGCAGACCGGGCAATCCC GGGGATGGCGCAGGGTAGGCACGATCGTCGTGCGCTGGCCAAAGCCGGTCCTCGTTGCCTCAAGCGCAGCAGTGCTGGTG GGGGCCGTCTTTCTGCCGTCCTACCGGGTGAGCTATAACGAGCGGGCCTTCCAGCCGGTGAACACTCCAGCTAACGCCGG ATTCATGGCCTCGGACCGACATTTTGCGGGCGGGAAACTGAACTCGGAAATGCTCTTGATCGAGTCCGATCACGATATGC GAAACCCCGCCGATTTCATCTCACTCGATCATGTCGCCAAGACCATCTTCCACACTCCGGGGATTGCCCAAGTTCAAGGC ATCACCCGGCCGGAGGGCCGTCCGATGGAGCGCGCGTCAATCGCCAACATACTGGCGGGGCAAGGCAGCAGCAGTGGTCA ACAGCTGCCATTTACCGAGAACCAAGTGGCAGATTTAGACAACCAAGTGGCCGTCATGGATCACACCATCTCGATCATGC AGACAGTTATTGGGCTCATGGATCAAATGACGCAACTCACCCATGAGATGGTGGGGACAATGGAGGAGATGAAGGCACTC GCTGACCAGGTGGAAGTAAACATCAGTGCCGTCGACGATTTCCTCAGACCTATTAAGAACTATTACTACTGGGAACCGCA CTGCGCGGACATCCCCATTTGCTGGATGGGGCGGTCGATGTTCGAGTCGATGGACAGCATCGACGGGATGACGGCACTAA CAGCGGAGGCGCTGGCCTCCATGCAGGTCATGGATCAGCTGCTGCCCCGCATGCTTGCGCAGACACGCATGGCATTAAGT GACATGACCATCATGCGAGGGATGATGGTCAAGTCGCGCGGCACACAGGCGCTGAACACCTACACTGCGGCCGATGACGC AAACGACATGATCGATATCGGTCAGGATTTTGACGATTCTCGTAATGACGACCTCTTCTATGCGCCGAAATATATCTTCA GTAATACTGACTTTCAGGTCGCTCTACGGTTTCTTGTCTCGCCGGACGGCACCGCGGCCAGGTTCATCATCAACCATGAC GGTGAGGCCCTGAGCCCCGAGGGGGTGGCCCATGTTAATGCCATCGAAAAGGCCGCCTATGAGGGGCTGAAAGGCACATC TCTCGCCGGGGCGAAGATCTACCTCGGAGGCTCGGCCTCGAATTATCGAGACATCGAACAATATGTAAAGTCCGATCTGC TGATCGCGGCTATCGCCTCATTCACCTTGATCTTCGTCATAATGCTGATCATCACGAGGAGCCTCATCGCCGCGTGCACC ATTATCGGCACAGTGGCGTTCTCCTTCTCGGGAGCATTCGGGTTGGGCATATTGATCTGGCAACACATAATTGGCCTCAA CCTGCACTGGATGGTCCTCCCACTCACCTTTATCCTCTTGGTCGCGGTGGGCTCAGATTACAATCTTCTGTTAATCGCAC GAATGAAGGAAGAATTACAGGGCGGAATCCAGACTGGAATCATACGGTCGGTGGGATCGACCGGTGGCGTTGTGACAGCC GCTGGTTTGGTTTTCGCGTTCACCATGCTGTCCATGGTGCCGAACGATCTACGTGCCATCTCGCAAGTGGGCTCGATTAT CTGCGTAGGCCTCCTGCTCGACACTTTGATTGTGCGTTCGTTCATTGTCCCAGCAATCGCCAGGATTTTGGGCCCATGGT TCTGGTGGCCGCGGGTCGTGCGTTGGCGCCCGGCGCATGCATCTGGGGCGGTGCTCACGAGCGCGCCGAAAGGAACGTGA
Upstream 100 bases:
>100_bases CAACGGCGAGGTTCGCGACGAACAGGTCCAGAGTCGCGAGCAGGGATCGGTCGCATGCAAGGTGAAGTCGGCATGACCAC CGCACGAGACGACGTGACAC
Downstream 100 bases:
>100_bases TTCCTATGCCTGCCGCCGAATCACAGCAGGATGACACCGCACACAGAATCCGTGCCGAGTCCCGAGAGTTTCGGATCGCG GCTGTGGGTCTGCTCCTGGC
Product: putative membrane protein MmpL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 959; Mature: 958
Protein sequence:
>959_residues MGNKHVGRDRGERRPFVAHAVRVLAIPIVLFWVGVAVLLSVLVPKLDGVTKQHAGPMVPLDAPSQRAMLHIGEKFQESTS TSLAYILLETEGRILGDADHKYYDELIRLLDADKQHVQFIMNMWGKPITAAGSQSPDNKAAYVMLRLVGDIGEAAANEST IALRKTVQDTLQRTPPPPGLRVYVSGAAPLSADLLDAGDKSMKRVLLFTIAVIIIMLVLVYRSIACVVLILLTVAFEFTV SNGIVSFFVVHNIIGISTFATSMVESLIIAAGTDYGIFLLGRYHEARNAGEDRDRAFYTTFHGVSHVILGSGLTIAGACL CLGFARLGYFNTMGPACAIAMLVTVAAALTLGPALLAIASKFGLLDPKQTGQSRGWRRVGTIVVRWPKPVLVASSAAVLV GAVFLPSYRVSYNERAFQPVNTPANAGFMASDRHFAGGKLNSEMLLIESDHDMRNPADFISLDHVAKTIFHTPGIAQVQG ITRPEGRPMERASIANILAGQGSSSGQQLPFTENQVADLDNQVAVMDHTISIMQTVIGLMDQMTQLTHEMVGTMEEMKAL ADQVEVNISAVDDFLRPIKNYYYWEPHCADIPICWMGRSMFESMDSIDGMTALTAEALASMQVMDQLLPRMLAQTRMALS DMTIMRGMMVKSRGTQALNTYTAADDANDMIDIGQDFDDSRNDDLFYAPKYIFSNTDFQVALRFLVSPDGTAARFIINHD GEALSPEGVAHVNAIEKAAYEGLKGTSLAGAKIYLGGSASNYRDIEQYVKSDLLIAAIASFTLIFVIMLIITRSLIAACT IIGTVAFSFSGAFGLGILIWQHIIGLNLHWMVLPLTFILLVAVGSDYNLLLIARMKEELQGGIQTGIIRSVGSTGGVVTA AGLVFAFTMLSMVPNDLRAISQVGSIICVGLLLDTLIVRSFIVPAIARILGPWFWWPRVVRWRPAHASGAVLTSAPKGT
Sequences:
>Translated_959_residues MGNKHVGRDRGERRPFVAHAVRVLAIPIVLFWVGVAVLLSVLVPKLDGVTKQHAGPMVPLDAPSQRAMLHIGEKFQESTS TSLAYILLETEGRILGDADHKYYDELIRLLDADKQHVQFIMNMWGKPITAAGSQSPDNKAAYVMLRLVGDIGEAAANEST IALRKTVQDTLQRTPPPPGLRVYVSGAAPLSADLLDAGDKSMKRVLLFTIAVIIIMLVLVYRSIACVVLILLTVAFEFTV SNGIVSFFVVHNIIGISTFATSMVESLIIAAGTDYGIFLLGRYHEARNAGEDRDRAFYTTFHGVSHVILGSGLTIAGACL CLGFARLGYFNTMGPACAIAMLVTVAAALTLGPALLAIASKFGLLDPKQTGQSRGWRRVGTIVVRWPKPVLVASSAAVLV GAVFLPSYRVSYNERAFQPVNTPANAGFMASDRHFAGGKLNSEMLLIESDHDMRNPADFISLDHVAKTIFHTPGIAQVQG ITRPEGRPMERASIANILAGQGSSSGQQLPFTENQVADLDNQVAVMDHTISIMQTVIGLMDQMTQLTHEMVGTMEEMKAL ADQVEVNISAVDDFLRPIKNYYYWEPHCADIPICWMGRSMFESMDSIDGMTALTAEALASMQVMDQLLPRMLAQTRMALS DMTIMRGMMVKSRGTQALNTYTAADDANDMIDIGQDFDDSRNDDLFYAPKYIFSNTDFQVALRFLVSPDGTAARFIINHD GEALSPEGVAHVNAIEKAAYEGLKGTSLAGAKIYLGGSASNYRDIEQYVKSDLLIAAIASFTLIFVIMLIITRSLIAACT IIGTVAFSFSGAFGLGILIWQHIIGLNLHWMVLPLTFILLVAVGSDYNLLLIARMKEELQGGIQTGIIRSVGSTGGVVTA AGLVFAFTMLSMVPNDLRAISQVGSIICVGLLLDTLIVRSFIVPAIARILGPWFWWPRVVRWRPAHASGAVLTSAPKGT >Mature_958_residues GNKHVGRDRGERRPFVAHAVRVLAIPIVLFWVGVAVLLSVLVPKLDGVTKQHAGPMVPLDAPSQRAMLHIGEKFQESTST SLAYILLETEGRILGDADHKYYDELIRLLDADKQHVQFIMNMWGKPITAAGSQSPDNKAAYVMLRLVGDIGEAAANESTI ALRKTVQDTLQRTPPPPGLRVYVSGAAPLSADLLDAGDKSMKRVLLFTIAVIIIMLVLVYRSIACVVLILLTVAFEFTVS NGIVSFFVVHNIIGISTFATSMVESLIIAAGTDYGIFLLGRYHEARNAGEDRDRAFYTTFHGVSHVILGSGLTIAGACLC LGFARLGYFNTMGPACAIAMLVTVAAALTLGPALLAIASKFGLLDPKQTGQSRGWRRVGTIVVRWPKPVLVASSAAVLVG AVFLPSYRVSYNERAFQPVNTPANAGFMASDRHFAGGKLNSEMLLIESDHDMRNPADFISLDHVAKTIFHTPGIAQVQGI TRPEGRPMERASIANILAGQGSSSGQQLPFTENQVADLDNQVAVMDHTISIMQTVIGLMDQMTQLTHEMVGTMEEMKALA DQVEVNISAVDDFLRPIKNYYYWEPHCADIPICWMGRSMFESMDSIDGMTALTAEALASMQVMDQLLPRMLAQTRMALSD MTIMRGMMVKSRGTQALNTYTAADDANDMIDIGQDFDDSRNDDLFYAPKYIFSNTDFQVALRFLVSPDGTAARFIINHDG EALSPEGVAHVNAIEKAAYEGLKGTSLAGAKIYLGGSASNYRDIEQYVKSDLLIAAIASFTLIFVIMLIITRSLIAACTI IGTVAFSFSGAFGLGILIWQHIIGLNLHWMVLPLTFILLVAVGSDYNLLLIARMKEELQGGIQTGIIRSVGSTGGVVTAA GLVFAFTMLSMVPNDLRAISQVGSIICVGLLLDTLIVRSFIVPAIARILGPWFWWPRVVRWRPAHASGAVLTSAPKGT
Specific function: Unknown
COG id: COG2409
COG function: function code R; Predicted drug exporters of the RND superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mmpL family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004707 - InterPro: IPR004869 [H]
Pfam domain/function: PF03176 MMPL [H]
EC number: NA
Molecular weight: Translated: 104005; Mature: 103874
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNKHVGRDRGERRPFVAHAVRVLAIPIVLFWVGVAVLLSVLVPKLDGVTKQHAGPMVPL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCC DAPSQRAMLHIGEKFQESTSTSLAYILLETEGRILGDADHKYYDELIRLLDADKQHVQFI CCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCEECCCCHHHHHHHHHHHCCCHHHHHHH MNMWGKPITAAGSQSPDNKAAYVMLRLVGDIGEAAANESTIALRKTVQDTLQRTPPPPGL HHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCE RVYVSGAAPLSADLLDAGDKSMKRVLLFTIAVIIIMLVLVYRSIACVVLILLTVAFEFTV EEEEECCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNGIVSFFVVHNIIGISTFATSMVESLIIAAGTDYGIFLLGRYHEARNAGEDRDRAFYTT HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHCCCCCCCCCEEHHH FHGVSHVILGSGLTIAGACLCLGFARLGYFNTMGPACAIAMLVTVAAALTLGPALLAIAS HHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KFGLLDPKQTGQSRGWRRVGTIVVRWPKPVLVASSAAVLVGAVFLPSYRVSYNERAFQPV HHCCCCCHHCCCCCCCEEECEEEEECCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCC NTPANAGFMASDRHFAGGKLNSEMLLIESDHDMRNPADFISLDHVAKTIFHTPGIAQVQG CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHCCC ITRPEGRPMERASIANILAGQGSSSGQQLPFTENQVADLDNQVAVMDHTISIMQTVIGLM CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCEEHHHHHHHHHHHHHHHH DQMTQLTHEMVGTMEEMKALADQVEVNISAVDDFLRPIKNYYYWEPHCADIPICWMGRSM HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCCCCCHHHCCHHH FESMDSIDGMTALTAEALASMQVMDQLLPRMLAQTRMALSDMTIMRGMMVKSRGTQALNT HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHC YTAADDANDMIDIGQDFDDSRNDDLFYAPKYIFSNTDFQVALRFLVSPDGTAARFIINHD EECCCCCCCHHHCCCCCCCCCCCCEEECCHHHCCCCCHHHHHHHHCCCCCCEEEEEEECC GEALSPEGVAHVNAIEKAAYEGLKGTSLAGAKIYLGGSASNYRDIEQYVKSDLLIAAIAS CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH FTLIFVIMLIITRSLIAACTIIGTVAFSFSGAFGLGILIWQHIIGLNLHWMVLPLTFILL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH VAVGSDYNLLLIARMKEELQGGIQTGIIRSVGSTGGVVTAAGLVFAFTMLSMVPNDLRAI HHCCCCCCEEEHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHH SQVGSIICVGLLLDTLIVRSFIVPAIARILGPWFWWPRVVRWRPAHASGAVLTSAPKGT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEECCCCCC >Mature Secondary Structure GNKHVGRDRGERRPFVAHAVRVLAIPIVLFWVGVAVLLSVLVPKLDGVTKQHAGPMVPL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCC DAPSQRAMLHIGEKFQESTSTSLAYILLETEGRILGDADHKYYDELIRLLDADKQHVQFI CCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCEECCCCHHHHHHHHHHHCCCHHHHHHH MNMWGKPITAAGSQSPDNKAAYVMLRLVGDIGEAAANESTIALRKTVQDTLQRTPPPPGL HHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCE RVYVSGAAPLSADLLDAGDKSMKRVLLFTIAVIIIMLVLVYRSIACVVLILLTVAFEFTV EEEEECCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNGIVSFFVVHNIIGISTFATSMVESLIIAAGTDYGIFLLGRYHEARNAGEDRDRAFYTT HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHCCCCCCCCCEEHHH FHGVSHVILGSGLTIAGACLCLGFARLGYFNTMGPACAIAMLVTVAAALTLGPALLAIAS HHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KFGLLDPKQTGQSRGWRRVGTIVVRWPKPVLVASSAAVLVGAVFLPSYRVSYNERAFQPV HHCCCCCHHCCCCCCCEEECEEEEECCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCC NTPANAGFMASDRHFAGGKLNSEMLLIESDHDMRNPADFISLDHVAKTIFHTPGIAQVQG CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHCCC ITRPEGRPMERASIANILAGQGSSSGQQLPFTENQVADLDNQVAVMDHTISIMQTVIGLM CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCEEHHHHHHHHHHHHHHHH DQMTQLTHEMVGTMEEMKALADQVEVNISAVDDFLRPIKNYYYWEPHCADIPICWMGRSM HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCCCCCHHHCCHHH FESMDSIDGMTALTAEALASMQVMDQLLPRMLAQTRMALSDMTIMRGMMVKSRGTQALNT HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHC YTAADDANDMIDIGQDFDDSRNDDLFYAPKYIFSNTDFQVALRFLVSPDGTAARFIINHD EECCCCCCCHHHCCCCCCCCCCCCEEECCHHHCCCCCHHHHHHHHCCCCCCEEEEEEECC GEALSPEGVAHVNAIEKAAYEGLKGTSLAGAKIYLGGSASNYRDIEQYVKSDLLIAAIAS CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH FTLIFVIMLIITRSLIAACTIIGTVAFSFSGAFGLGILIWQHIIGLNLHWMVLPLTFILL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH VAVGSDYNLLLIARMKEELQGGIQTGIIRSVGSTGGVVTAAGLVFAFTMLSMVPNDLRAI HHCCCCCCEEEHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHH SQVGSIICVGLLLDTLIVRSFIVPAIARILGPWFWWPRVVRWRPAHASGAVLTSAPKGT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]