| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629067
Identifier: 169629067
GI number: 169629067
Start: 1978711
End: 1979139
Strand: Reverse
Name: 169629067
Synonym: MAB_1980c
Alternate gene names: NA
Gene position: 1979139-1978711 (Counterclockwise)
Preceding gene: 169629075
Following gene: 169629065
Centisome position: 39.06
GC content: 64.1
Gene sequence:
>429_bases ATGAGCCGACTGGTGGCGAAGGTGCTCGGTGTGCACCAGCGCATCTATATCGCCTCGAAAGGCTATCTGGGTCATCACGT TCCGGGGATGGCTCCCAACCTGTTGCTGACGTCTGTCGGCGCCAAGTCCGGCGCCCGGCGCATCAACTCGTTGACCTACG CCCACGACGGCAAGGATCTGGTCATCGTGGCGTCCAACGGCGGGGCCCGCCGCAACCCTGCCTGGTATCACAACCTCAAG GCCCACCCTGACGTGCAGGTTCAGCTGGGCCGCGAGAAACGCCGCGTACACGCCACCGCCCTGCTCCCGGGCGATGCCGA TTATGAACGGCTATGGAAGTTGGCTGATACCAACAACTCTGGCCACTACAGCGCATATCAGCGCGCGACGTCCCGGCCCA TCCCGATAGTCGTGCTCGCCCCGGCGTGA
Upstream 100 bases:
>100_bases GGTAGTCTTCTCAGCCACCTGACAGACGCTACCCTTCTCGATGGCGCTCGGATACTCCCATCCTGGCAATTCGCCGCGGC CTCACCACGGAAGGACACCC
Downstream 100 bases:
>100_bases TCAGGCCTGCCGGGCCCGTGATTCACCAATCGGGCGGCCGGCCTCCAGCCGTTGCTTGACCTCGAAGGCAAACCGCTTGC CGGCCACACGACGGGCATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MSRLVAKVLGVHQRIYIASKGYLGHHVPGMAPNLLLTSVGAKSGARRINSLTYAHDGKDLVIVASNGGARRNPAWYHNLK AHPDVQVQLGREKRRVHATALLPGDADYERLWKLADTNNSGHYSAYQRATSRPIPIVVLAPA
Sequences:
>Translated_142_residues MSRLVAKVLGVHQRIYIASKGYLGHHVPGMAPNLLLTSVGAKSGARRINSLTYAHDGKDLVIVASNGGARRNPAWYHNLK AHPDVQVQLGREKRRVHATALLPGDADYERLWKLADTNNSGHYSAYQRATSRPIPIVVLAPA >Mature_141_residues SRLVAKVLGVHQRIYIASKGYLGHHVPGMAPNLLLTSVGAKSGARRINSLTYAHDGKDLVIVASNGGARRNPAWYHNLKA HPDVQVQLGREKRRVHATALLPGDADYERLWKLADTNNSGHYSAYQRATSRPIPIVVLAPA
Specific function: May be involved in the activation of oxazole analogs [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the deazaflavin-dependent nitroreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004378 [H]
Pfam domain/function: PF04075 DUF385 [H]
EC number: NA
Molecular weight: Translated: 15520; Mature: 15389
Theoretical pI: Translated: 10.86; Mature: 10.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLVAKVLGVHQRIYIASKGYLGHHVPGMAPNLLLTSVGAKSGARRINSLTYAHDGKDL CHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCHHHHHCEEEEECCCEE VIVASNGGARRNPAWYHNLKAHPDVQVQLGREKRRVHATALLPGDADYERLWKLADTNNS EEEECCCCCCCCCCEECCCCCCCCEEEEECCCCCEEEEEEECCCCCCHHHHHHHHCCCCC GHYSAYQRATSRPIPIVVLAPA CCCHHHHHHCCCCCCEEEEECC >Mature Secondary Structure SRLVAKVLGVHQRIYIASKGYLGHHVPGMAPNLLLTSVGAKSGARRINSLTYAHDGKDL HHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCHHHHHCEEEEECCCEE VIVASNGGARRNPAWYHNLKAHPDVQVQLGREKRRVHATALLPGDADYERLWKLADTNNS EEEECCCCCCCCCCEECCCCCCCCEEEEECCCCCEEEEEEECCCCCCHHHHHHHHCCCCC GHYSAYQRATSRPIPIVVLAPA CCCHHHHHHCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]