| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629019
Identifier: 169629019
GI number: 169629019
Start: 1930855
End: 1931265
Strand: Reverse
Name: 169629019
Synonym: MAB_1931c
Alternate gene names: NA
Gene position: 1931265-1930855 (Counterclockwise)
Preceding gene: 169629020
Following gene: 169629018
Centisome position: 38.11
GC content: 64.23
Gene sequence:
>411_bases ATGGCTCCCGCTGATATCGAAAACAAGCTCACCGCGCTGACGCCGATCACCTTGTCGGCGTTCCGGGTCGTGACCGGATT CCTGTTCTTCTTGCACGGCACCTCGCACCTGTTCGGCTGGCCCCTCGCCTCGTATCTGCAGCCTGTCGGCACGCTGCCGT GGTGGGCCGGAATCATCGAGTTCGTTGGTGGCGCGGCGATCGCCCTCGGCATCGGCACCAGATTGGCCGCCTTTGTGGCA TCCGGCGCGATGGCGGTCGCGTACTTCACCTACCACCAGCCCGAGGGTCTGTTGCCCATCCAGAACAGCGGCGAGGCCGC CGCGCTGTACAGCTGGAGCTTCCTGCTGCTGGTGTTCACCGGTGGCGGGTCCCTGTCCCTAGACCGATTCATTACCCGAG CTAAGCGCTAA
Upstream 100 bases:
>100_bases CATCGAACAACCTGGGACTACTGGCCGCCGAGACCCTGGTGAAGGCGGTCACCGAAGGGTAGACAGGAATAAAGCGGACC ATGGTCCTATTGTTAGACAC
Downstream 100 bases:
>100_bases GTTGTTACGCCAGAATTGGTTTAGCATCCTGACCATGGCATCCTCCAGCACGCCCAGCTCGGTCGCCAAGCTCGACGGCG CCACCCCCATTGTCCTGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MAPADIENKLTALTPITLSAFRVVTGFLFFLHGTSHLFGWPLASYLQPVGTLPWWAGIIEFVGGAAIALGIGTRLAAFVA SGAMAVAYFTYHQPEGLLPIQNSGEAAALYSWSFLLLVFTGGGSLSLDRFITRAKR
Sequences:
>Translated_136_residues MAPADIENKLTALTPITLSAFRVVTGFLFFLHGTSHLFGWPLASYLQPVGTLPWWAGIIEFVGGAAIALGIGTRLAAFVA SGAMAVAYFTYHQPEGLLPIQNSGEAAALYSWSFLLLVFTGGGSLSLDRFITRAKR >Mature_135_residues APADIENKLTALTPITLSAFRVVTGFLFFLHGTSHLFGWPLASYLQPVGTLPWWAGIIEFVGGAAIALGIGTRLAAFVAS GAMAVAYFTYHQPEGLLPIQNSGEAAALYSWSFLLLVFTGGGSLSLDRFITRAKR
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the doxX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011637 [H]
Pfam domain/function: PF07681 DoxX [H]
EC number: NA
Molecular weight: Translated: 14535; Mature: 14404
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPADIENKLTALTPITLSAFRVVTGFLFFLHGTSHLFGWPLASYLQPVGTLPWWAGIIE CCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHCCCCHHHHHHHH FVGGAAIALGIGTRLAAFVASGAMAVAYFTYHQPEGLLPIQNSGEAAALYSWSFLLLVFT HHCCHHHHHHHHHHHHHHHHCCHHEEEEEEEECCCCCCCCCCCCCEEHHHHHEEEEEEEE GGGSLSLDRFITRAKR CCCCCCHHHHHHHHCC >Mature Secondary Structure APADIENKLTALTPITLSAFRVVTGFLFFLHGTSHLFGWPLASYLQPVGTLPWWAGIIE CCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHCCCCHHHHHHHH FVGGAAIALGIGTRLAAFVASGAMAVAYFTYHQPEGLLPIQNSGEAAALYSWSFLLLVFT HHCCHHHHHHHHHHHHHHHHCCHHEEEEEEEECCCCCCCCCCCCCEEHHHHHEEEEEEEE GGGSLSLDRFITRAKR CCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]