| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629018
Identifier: 169629018
GI number: 169629018
Start: 1930398
End: 1930820
Strand: Reverse
Name: 169629018
Synonym: MAB_1930c
Alternate gene names: NA
Gene position: 1930820-1930398 (Counterclockwise)
Preceding gene: 169629019
Following gene: 169629016
Centisome position: 38.1
GC content: 62.41
Gene sequence:
>423_bases ATGGCATCCTCCAGCACGCCCAGCTCGGTCGCCAAGCTCGACGGCGCCACCCCCATTGTCCTGTCACTGTTCCGTATCGT CTTCGGGTTACTGTTCACGATCCATGGCACGGCGATCCTGTTCCGCTGGCCCGACCTGGCTTCGATGCCCCCTGTCGAGT CATGGTCACTGGGCTGGTGGGCCGGCGCCATCGAATTCCTCACCGGCGTCGCGATTCTGTTCGGCGCAGGCACCCGGATA GCGGCGTTCATCGCCTCGGGCACCATGGCGTTCGCCTACTTCACTCAGCATCAGCCGGAAGGCCTGCTGCCCATTGAGAA CAATGGCGAATTGGCCGCCCTGTTCTGCTGGGGCTTTCTCCTGTTGGTTTTCACCGGCGGCGGATCGCTGTCGATCGACG CGGCACTCAAGAAGAAGAGTTAG
Upstream 100 bases:
>100_bases CTGCTGGTGTTCACCGGTGGCGGGTCCCTGTCCCTAGACCGATTCATTACCCGAGCTAAGCGCTAAGTTGTTACGCCAGA ATTGGTTTAGCATCCTGACC
Downstream 100 bases:
>100_bases GCACGACCACCGTGGCGATGAGCGCCCGGTGGTCGGTGCCATAGATCTCCTCGGTGCTCACCGACGTCGCGGTCGCGCCG CGGGTCAGCACGTGGTCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein; Transmembrane DoxD Family Protein; Conserved Membrane Protein; DoxX Subfamily; Doxx Family Protein; DoxX Family Protein Membrane Protein
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MASSSTPSSVAKLDGATPIVLSLFRIVFGLLFTIHGTAILFRWPDLASMPPVESWSLGWWAGAIEFLTGVAILFGAGTRI AAFIASGTMAFAYFTQHQPEGLLPIENNGELAALFCWGFLLLVFTGGGSLSIDAALKKKS
Sequences:
>Translated_140_residues MASSSTPSSVAKLDGATPIVLSLFRIVFGLLFTIHGTAILFRWPDLASMPPVESWSLGWWAGAIEFLTGVAILFGAGTRI AAFIASGTMAFAYFTQHQPEGLLPIENNGELAALFCWGFLLLVFTGGGSLSIDAALKKKS >Mature_139_residues ASSSTPSSVAKLDGATPIVLSLFRIVFGLLFTIHGTAILFRWPDLASMPPVESWSLGWWAGAIEFLTGVAILFGAGTRIA AFIASGTMAFAYFTQHQPEGLLPIENNGELAALFCWGFLLLVFTGGGSLSIDAALKKKS
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14839; Mature: 14708
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSSTPSSVAKLDGATPIVLSLFRIVFGLLFTIHGTAILFRWPDLASMPPVESWSLGWW CCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHH AGAIEFLTGVAILFGAGTRIAAFIASGTMAFAYFTQHQPEGLLPIENNGELAALFCWGFL HHHHHHHHHHHHHHCCCHHHHHHHHCCHHEEEEEECCCCCCCCEECCCCCEEHHHHHHHH LLVFTGGGSLSIDAALKKKS HHHHCCCCCEEEEEECCCCC >Mature Secondary Structure ASSSTPSSVAKLDGATPIVLSLFRIVFGLLFTIHGTAILFRWPDLASMPPVESWSLGWW CCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHH AGAIEFLTGVAILFGAGTRIAAFIASGTMAFAYFTQHQPEGLLPIENNGELAALFCWGFL HHHHHHHHHHHHHHCCCHHHHHHHHCCHHEEEEEECCCCCCCCEECCCCCEEHHHHHHHH LLVFTGGGSLSIDAALKKKS HHHHCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA