| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is panB [H]
Identifier: 169629004
GI number: 169629004
Start: 1915040
End: 1915918
Strand: Reverse
Name: panB [H]
Synonym: MAB_1916c
Alternate gene names: 169629004
Gene position: 1915918-1915040 (Counterclockwise)
Preceding gene: 169629011
Following gene: 169629002
Centisome position: 37.81
GC content: 64.96
Gene sequence:
>879_bases ATGTCCGAATCTGCCTTGTATGGCGCTGCTTCCGAAAAATCGACTGAGCCGCGTACGCAGCCTGATGCTCTTCGCGCAAA ACGCTCATCGCAGACCCGTGTGCACCACTTGCAAAAGTGGAAGGCCGAGGGCCACAAGTGGTCGATGCTCACCGCGTACG ACTACTCCACCGCGCGGGTATTCAACGATGCCGGGATTCCCGTTCTGCTGGTCGGAGATTCGGCCGCGAACGTGGTCTAC GGATATGACACCACCGTGCCGATCACCATCGACGAGCTGATTCCGTTGGTGCGTGGCGTGGTTCGTGGCGCGCCCGAGGC GCTGGTGGTCGCCGACCTACCCTTCGGTTCCTATGAGGGCGGCGCCGCTCAGGCGCTCGCGAGCGCCACTCGGTTCATGA AGGAAGCCGGCGCCCACGCCGTGAAACTCGAAGGCGGAGAACGGGTTGCCGAGCAGATCGCCACACTGACCGCCGCCGGC ATCCCGGTGGTGGCGCACATCGGGTTCACGCCACAGAGCGTGAACGGCCTTGGCGGATACCGAGTCCAGGGTCGCGACGA CGCTGCCGCACAGCTCATTCACGACGCCATCGCGGTTCAGGAGGCGGGGGCCATCGCCGTGGTGATGGAGATGGTGCCGG CGGAGCTGGCCACACAGATCACCGGCAAGCTCACCATCCCCACCGTCGGCATCGGCGCGGGCCGGGAGTGCGACGCCCAG GTGTTGGTGTGGCAGGACATGGCCGGAATGACCAGCGGTAAGACCGCCAAGTTCGTCAAGCAATTCGGCCAGGTCGGTGC CGAGCTACGCAAGGCCGCCGAGCAGTACGCCGATGAGGTGGCTCGCGGAGTGTTCCCCGCTCCCGAGCACTCGTACTAA
Upstream 100 bases:
>100_bases TATTCATCTCCTCGCTATGCGGTGGCACACTGAACATCGTTAGAAACCCAGGGACCCGGATGGGCCTTGAGGAATTTCAA AACGATGAGGTGACTTCTTC
Downstream 100 bases:
>100_bases ATCGAGATCGTCAGGCGCGCACGCCGAGTTTGTTGTCCAGGTACTCCTGGCGGCAGGCTCGGCGTGCGAGCTTTCCGCTG GTAGTGCGGGGAATCGCACC
Product: 3-methyl-2-oxobutanoate hydroxymethyltransferase
Products: NA
Alternate protein names: Ketopantoate hydroxymethyltransferase; KPHMT [H]
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MSESALYGAASEKSTEPRTQPDALRAKRSSQTRVHHLQKWKAEGHKWSMLTAYDYSTARVFNDAGIPVLLVGDSAANVVY GYDTTVPITIDELIPLVRGVVRGAPEALVVADLPFGSYEGGAAQALASATRFMKEAGAHAVKLEGGERVAEQIATLTAAG IPVVAHIGFTPQSVNGLGGYRVQGRDDAAAQLIHDAIAVQEAGAIAVVMEMVPAELATQITGKLTIPTVGIGAGRECDAQ VLVWQDMAGMTSGKTAKFVKQFGQVGAELRKAAEQYADEVARGVFPAPEHSY
Sequences:
>Translated_292_residues MSESALYGAASEKSTEPRTQPDALRAKRSSQTRVHHLQKWKAEGHKWSMLTAYDYSTARVFNDAGIPVLLVGDSAANVVY GYDTTVPITIDELIPLVRGVVRGAPEALVVADLPFGSYEGGAAQALASATRFMKEAGAHAVKLEGGERVAEQIATLTAAG IPVVAHIGFTPQSVNGLGGYRVQGRDDAAAQLIHDAIAVQEAGAIAVVMEMVPAELATQITGKLTIPTVGIGAGRECDAQ VLVWQDMAGMTSGKTAKFVKQFGQVGAELRKAAEQYADEVARGVFPAPEHSY >Mature_291_residues SESALYGAASEKSTEPRTQPDALRAKRSSQTRVHHLQKWKAEGHKWSMLTAYDYSTARVFNDAGIPVLLVGDSAANVVYG YDTTVPITIDELIPLVRGVVRGAPEALVVADLPFGSYEGGAAQALASATRFMKEAGAHAVKLEGGERVAEQIATLTAAGI PVVAHIGFTPQSVNGLGGYRVQGRDDAAAQLIHDAIAVQEAGAIAVVMEMVPAELATQITGKLTIPTVGIGAGRECDAQV LVWQDMAGMTSGKTAKFVKQFGQVGAELRKAAEQYADEVARGVFPAPEHSY
Specific function: Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is tranferred onto alpha-ketoisovalerate to form ketopantoate [H]
COG id: COG0413
COG function: function code H; Ketopantoate hydroxymethyltransferase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the panB family [H]
Homologues:
Organism=Escherichia coli, GI1786326, Length=262, Percent_Identity=47.3282442748092, Blast_Score=235, Evalue=2e-63, Organism=Saccharomyces cerevisiae, GI6319653, Length=251, Percent_Identity=39.0438247011952, Blast_Score=173, Evalue=2e-44,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003700 - InterPro: IPR015813 [H]
Pfam domain/function: PF02548 Pantoate_transf [H]
EC number: =2.1.2.11 [H]
Molecular weight: Translated: 30788; Mature: 30657
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESALYGAASEKSTEPRTQPDALRAKRSSQTRVHHLQKWKAEGHKWSMLTAYDYSTARV CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEECCCHHEE FNDAGIPVLLVGDSAANVVYGYDTTVPITIDELIPLVRGVVRGAPEALVVADLPFGSYEG ECCCCCEEEEECCCCCCEEEECCCEECEEHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC GAAQALASATRFMKEAGAHAVKLEGGERVAEQIATLTAAGIPVVAHIGFTPQSVNGLGGY HHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCE RVQGRDDAAAQLIHDAIAVQEAGAIAVVMEMVPAELATQITGKLTIPTVGIGAGRECDAQ EECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEECEECCCCCCCCCCE VLVWQDMAGMTSGKTAKFVKQFGQVGAELRKAAEQYADEVARGVFPAPEHSY EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SESALYGAASEKSTEPRTQPDALRAKRSSQTRVHHLQKWKAEGHKWSMLTAYDYSTARV CCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEECCCHHEE FNDAGIPVLLVGDSAANVVYGYDTTVPITIDELIPLVRGVVRGAPEALVVADLPFGSYEG ECCCCCEEEEECCCCCCEEEECCCEECEEHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC GAAQALASATRFMKEAGAHAVKLEGGERVAEQIATLTAAGIPVVAHIGFTPQSVNGLGGY HHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCE RVQGRDDAAAQLIHDAIAVQEAGAIAVVMEMVPAELATQITGKLTIPTVGIGAGRECDAQ EECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEECEECCCCCCCCCCE VLVWQDMAGMTSGKTAKFVKQFGQVGAELRKAAEQYADEVARGVFPAPEHSY EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA