| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628982
Identifier: 169628982
GI number: 169628982
Start: 1891504
End: 1892562
Strand: Reverse
Name: 169628982
Synonym: MAB_1894c
Alternate gene names: NA
Gene position: 1892562-1891504 (Counterclockwise)
Preceding gene: 169628983
Following gene: 169628978
Centisome position: 37.35
GC content: 60.43
Gene sequence:
>1059_bases ATGGCCAAGAACATCGTCATCTGTTTTGACGGCACCGGTAATCAGATCCGGGCCTCGGGAAACACGAATGTGGTCCGCGG CTACGACATGATGGTCCATGACCTCACCGACCGACAGATCTCGTATTACGACCCCGGTGTAGGCACCGATCCCGTCGTCG GCACCTACACGCCGGGGGGCCAGTTCATCGCTCGCCTACTCGGTGTCACATTCGGTATCGGCTTGCGCGCCAAGCTGGCT CAGGCCTATACCTATCTGATTGAGCGTTGGGAGCCCGGGGACCGGATTTTCATCTTCGGGTTCAGCCGCGGCGCGTTCTG CGCGAGAGGTCTTGCGGGTCTACTCAATTCGGTCGGCATGCTGCGCGCCGGTTCTCAAAACCTGGTCCCCTATGCGGTGA GTCTGTATGCACAGTCATGCACCGACTGGTCCGCAGAACGATGGGATGAGCTGCACTCGTTCTCACGCACGGTGGCCCGC CGCGAGGACGGTAAGTTCTCCATCCCTGTTGCCTACCTGGGCCTGTGGGACACAGTCAGCGCTCCGGGCATCTTCAAGCG GAGCATGCAATGGCCTTATGCCCCAAGTGTTCCCAACGCATTGGCCGGGCGGCACGCAGTGGCCATCGACGAGAGACGCC GACCCTATCGGGAATACCTCATCAAATTCCTGGGCGATCAGCGACTGGTCGATGAGGCGTGGTTCGCGGGCATCCACTCC GATATCGGCGGTGACTATGCCGATGACGACAGACTCTCCGACATCGCCCTCAAATGGGTGATAGAGGGAGCCGCGGAACA CGGCCTGCTGCTCAACATCGAGAAATACCAACGTTACTGCTCCGTTGAACCCACCTACGCCATGGGCAGGATTCATCGCG TCAGCTGGCTCTGGGCACTGCTGTTATTCCGTCGACGTCGCATCCCCGACGGCGCCTGGATTCACGCCAGTGTCGCCGAC CGTATGGCCCAAGACAGCACCTACCGACCAGCGCTACCGGAGCACAGCACCGTCATCGATGCCCAATGGTCCACTCCGGC AACTGATATCAGGCTGTAG
Upstream 100 bases:
>100_bases TCATCGGCGTGTGGAACGAAGAACATGTGGAGTATCAGAATCCGCATGCCTCGCCGTATGACCCGAAGCCGTACGACGGC GAGGACTAAACCGAACGGCG
Downstream 100 bases:
>100_bases CGGGCGGGCCGACTTGCAGCCCCGCCAGAATCGTCTCGCGCGCCGTGTCAAAACCACGGACGGTATCGTCCAATGCCTGC ACCGACACCCCGACGGTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MAKNIVICFDGTGNQIRASGNTNVVRGYDMMVHDLTDRQISYYDPGVGTDPVVGTYTPGGQFIARLLGVTFGIGLRAKLA QAYTYLIERWEPGDRIFIFGFSRGAFCARGLAGLLNSVGMLRAGSQNLVPYAVSLYAQSCTDWSAERWDELHSFSRTVAR REDGKFSIPVAYLGLWDTVSAPGIFKRSMQWPYAPSVPNALAGRHAVAIDERRRPYREYLIKFLGDQRLVDEAWFAGIHS DIGGDYADDDRLSDIALKWVIEGAAEHGLLLNIEKYQRYCSVEPTYAMGRIHRVSWLWALLLFRRRRIPDGAWIHASVAD RMAQDSTYRPALPEHSTVIDAQWSTPATDIRL
Sequences:
>Translated_352_residues MAKNIVICFDGTGNQIRASGNTNVVRGYDMMVHDLTDRQISYYDPGVGTDPVVGTYTPGGQFIARLLGVTFGIGLRAKLA QAYTYLIERWEPGDRIFIFGFSRGAFCARGLAGLLNSVGMLRAGSQNLVPYAVSLYAQSCTDWSAERWDELHSFSRTVAR REDGKFSIPVAYLGLWDTVSAPGIFKRSMQWPYAPSVPNALAGRHAVAIDERRRPYREYLIKFLGDQRLVDEAWFAGIHS DIGGDYADDDRLSDIALKWVIEGAAEHGLLLNIEKYQRYCSVEPTYAMGRIHRVSWLWALLLFRRRRIPDGAWIHASVAD RMAQDSTYRPALPEHSTVIDAQWSTPATDIRL >Mature_351_residues AKNIVICFDGTGNQIRASGNTNVVRGYDMMVHDLTDRQISYYDPGVGTDPVVGTYTPGGQFIARLLGVTFGIGLRAKLAQ AYTYLIERWEPGDRIFIFGFSRGAFCARGLAGLLNSVGMLRAGSQNLVPYAVSLYAQSCTDWSAERWDELHSFSRTVARR EDGKFSIPVAYLGLWDTVSAPGIFKRSMQWPYAPSVPNALAGRHAVAIDERRRPYREYLIKFLGDQRLVDEAWFAGIHSD IGGDYADDDRLSDIALKWVIEGAAEHGLLLNIEKYQRYCSVEPTYAMGRIHRVSWLWALLLFRRRRIPDGAWIHASVADR MAQDSTYRPALPEHSTVIDAQWSTPATDIRL
Specific function: Unknown
COG id: COG3673
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6320812, Length=225, Percent_Identity=32.8888888888889, Blast_Score=125, Evalue=1e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39548; Mature: 39417
Theoretical pI: Translated: 7.98; Mature: 7.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKNIVICFDGTGNQIRASGNTNVVRGYDMMVHDLTDRQISYYDPGVGTDPVVGTYTPGG CCCCEEEEECCCCCEEEECCCCCEEECHHHEEECCCCCEEEEECCCCCCCCEEEEECCCH QFIARLLGVTFGIGLRAKLAQAYTYLIERWEPGDRIFIFGFSRGAFCARGLAGLLNSVGM HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHH LRAGSQNLVPYAVSLYAQSCTDWSAERWDELHSFSRTVARREDGKFSIPVAYLGLWDTVS HCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEECEEEEEECHHCCC APGIFKRSMQWPYAPSVPNALAGRHAVAIDERRRPYREYLIKFLGDQRLVDEAWFAGIHS CCCHHHHCCCCCCCCCCCHHHCCCEEEEEHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHH DIGGDYADDDRLSDIALKWVIEGAAEHGLLLNIEKYQRYCSVEPTYAMGRIHRVSWLWAL HCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHH LLFRRRRIPDGAWIHASVADRMAQDSTYRPALPEHSTVIDAQWSTPATDIRL HHHHHHCCCCCCEEEHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCC >Mature Secondary Structure AKNIVICFDGTGNQIRASGNTNVVRGYDMMVHDLTDRQISYYDPGVGTDPVVGTYTPGG CCCEEEEECCCCCEEEECCCCCEEECHHHEEECCCCCEEEEECCCCCCCCEEEEECCCH QFIARLLGVTFGIGLRAKLAQAYTYLIERWEPGDRIFIFGFSRGAFCARGLAGLLNSVGM HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHH LRAGSQNLVPYAVSLYAQSCTDWSAERWDELHSFSRTVARREDGKFSIPVAYLGLWDTVS HCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEECEEEEEECHHCCC APGIFKRSMQWPYAPSVPNALAGRHAVAIDERRRPYREYLIKFLGDQRLVDEAWFAGIHS CCCHHHHCCCCCCCCCCCHHHCCCEEEEEHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHH DIGGDYADDDRLSDIALKWVIEGAAEHGLLLNIEKYQRYCSVEPTYAMGRIHRVSWLWAL HCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHH LLFRRRRIPDGAWIHASVADRMAQDSTYRPALPEHSTVIDAQWSTPATDIRL HHHHHHCCCCCCEEEHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA