| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is aceE [H]
Identifier: 169628972
GI number: 169628972
Start: 1881176
End: 1883893
Strand: Reverse
Name: aceE [H]
Synonym: MAB_1884c
Alternate gene names: 169628972
Gene position: 1883893-1881176 (Counterclockwise)
Preceding gene: 169628978
Following gene: 169628971
Centisome position: 37.18
GC content: 66.48
Gene sequence:
>2718_bases GTGATCCGCGAAGGTGTCGCGTCATACTTGCCGGACATCGATCCGGATGAGACGGGCGAATGGCTGGAGTCGTTTGACGG CCTGCTGGCCCGCTCGGGGCCGGCCCGGGCCCGGTACCTGATGCTGCGGCTGCTGGAGCGGGCGAACGCGGGCCGCGTGG CCATCCCCGCGCTGACGTCCACCGACTACGTCAACACCATCCCCACCGAGAACGAGCCGTGGTTCCCCGGCGATGAGGAC ACCGAGCGCCGTTTTCGCGCGTGGATCCGCTGGAATGCCGCGATCATGGTGCACCGCGCGCAGCGCCCAGGCGTGGGTGT GGGCGGACACATCTCGACCTATGCCTCCTCGGCCGCCCTCTACGAGGTCGGTTTCAACCACTTCTTCCGGGGAAATGCCC ACCCGGGCGGCGGCGACCAGATATTCATCCAGGGCCACGCCTCCCCCGGCATCTACGCCCGTGCCTTCCTGGAGGGCCGG CTCACCACCGATCAGCTGGACGGATTCCGCCAGGAGAAGAGCCACCCCGGCGGCGGCCTACCCTCCTACCCGCATCCGCG CCTGATGCCCGATTTCTGGCAGTTCCCAACGGTTTCCATGGGGCTGGGACCGATGAACGCGATCATGCAGGCGCGGTTCA ACCACTACCTTCGTGACCGCGGCATCAAGGACACCTCCGATCAGCGGGTGTGGGCCTTCCTCGGCGACGGCGAAATGGAC GAGCCCGAATCGCGCGGCCTGGCACACATCGCCGCGACCGAGGGCCTGGACAACCTGACGTTCGTCGTCAACTGCAACTT GCAGCGCCTCGACGGCCCGGTGCGCGGCAACGGCAAGATCATCCAGGAGCTGGAGTCCTTCTTCCGCGGCGCCGGCTGGA ATGTCATCAAGGTGGTGTGGGGCCGCGAATGGGATGCCCTGCTGCACGCCGACCGCGACGGCGCACTGGTGAACTTGATG AACACCACCGCCGACGGCGACTACCAGACCTACAAGGCCAATGACGGTGCCTACGTCCGCGAGCACTTCTTCGGGCGCGA TCCGCGCACCAAGGAACTGGTGAAAGACCTTACCGACGCCCAGGTTTGGAACCTCAAGCGCGGCGGCCACGACTATCGCA AGGTATACGCCGCCTACCGCGCGGCCACCGAGCACAAGGGCCAGCCGACGGTCATCCTGGCCAAGACCATCAAGGGCTAC ACGCTGGGCAAGCACTTCGAGGGCCGCAACGCCACTCACCAGATGAAGAAGCTGACGCTGGATGACCTGAAGGACTTCCG CGACAAGCAGCGCATCCCGATCTCGGACGCCCAGCTCGAAGAGAACCCCTATCTGCCGCCGTATTACCACCCCGGCCCCG AGGCTCCGGAAATCCGCTACATGCTGGACCGGCGCCGCGCCCTGGGTGGCTTTGTGCCGTCGCGTCGCACCACGTCGCGC CCGCTCACGCTGCCGGGTTCGGAGACCTATGCCTCGATCAAGAAGGGCTCGGGCAAGCAAGAAGTCGCCACCACCATGGC GCTGGTCCGCACCTTCAAAGAACTGTTGCGCGACAAGAACATCGGTAACCGCATCGTTCCGATCATCCCCGACGAGGCCC GCACCTTCGGCATGGACTCGTGGTTCCCGTCGCTGAAGATCTACAACCGCAACGGCCAGCTGTACACCTCGGTGGATGCC GAATTGATGTTGGCGTACAAGGAAAGCGCGCAGGGACAGATCCTGCACGAGGGCATCAACGAGGCCGGATCCACCGCCTC GTTCACCGCGGTGGGCACGGCGTACTCGACCCACGACGAGCCGATGATCCCGCTGTACATCTTCTATTCGATGTTCGGCT TCCAGCGCACCGGCGACGGCCTGTGGGCCGCCGCCGACCAGATGGCCCGCGGCTTCGTGCTGGGCGCGACGGCGGGCCGC ACCACCCTGACCGGCGAGGGCCTGCAGCACGCCGACGGCCACTCGCTGCTACTGGCGAGCACCAATCCCGCTGTGGTGGC TTACGATCCGGCGTTCGCGTACGAGATCGCGCACATCGTCGAGCATGGCCTGCAGCGGATGTACGGCGAGAACAGCGAGA ACGTGTACTTCTACATCACGCTGTACAACGAGCCGTACGTGCAGCCGGCCGAGCCGGAGAACGTCGATACCGAGGGCATT CTGCGCGGCATCTATAAGTTCCGCGCGGCACCCGAAGCGCGCACGCACCGGGCCAACATCCTGGCCTCCGGGGTGTCGGT GCCCGACGCGCTGCGGGCCGCGGACTTGTTGGCCGAGCAGTGGGATGTAGCGGCCGACGTGTGGTCGGTGACCTCCTGGG GTGAGCTCAACCGGGACGGCCTGGCGATCGATCACCAAGCGCTGCGTCACCCGGACCGCCCCAAGGGAGTGCCGTACGTG ACAAAGGCGCTGGAGGGCGCCCAGGGCCCCAAGGTGGCGGTCTCGGACTGGATGCACGCGGTGCCCGAGCAGATCAGGCC GTGGGTGCCCGGGATGTACCGCACGCTCGGCGCCGACGGGTTCGGCATCTCCGACACCCGTCCCGCCGCACGCCGGTTCT TCAACACCGACGCCGAGTCGGTCGTCGTCGCGGTGCTCGAGGCATTGGCCGACGAGGGTTCGGTCGACCGCCAGGTCGCC GTCACGGCGGCCGCCCAGTACAAGATCGATGATGTGTCGGCCGCCGACGTCTCCTATAAAGACACCGGCAGCGCCTAG
Upstream 100 bases:
>100_bases CCCCTAAGGAGCAGAAAAGTTGACCACGGAGTTCGCTCGCCAGGATCTGGCCGGAAATTCAAGTGTGCCAAGTCCATCCG AGAATCCAGAACGTGTCCGG
Downstream 100 bases:
>100_bases CCCCCCCCGCGAGCATGCTCAAATGTGCGGATTTCGAGCCGATTTCCGCACATTTGAGCATGCTCGCTCTTTTTGTCGAC ATCAATTGTACTAATCGGTA
Product: pyruvate dehydrogenase subunit E1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 905; Mature: 905
Protein sequence:
>905_residues MIREGVASYLPDIDPDETGEWLESFDGLLARSGPARARYLMLRLLERANAGRVAIPALTSTDYVNTIPTENEPWFPGDED TERRFRAWIRWNAAIMVHRAQRPGVGVGGHISTYASSAALYEVGFNHFFRGNAHPGGGDQIFIQGHASPGIYARAFLEGR LTTDQLDGFRQEKSHPGGGLPSYPHPRLMPDFWQFPTVSMGLGPMNAIMQARFNHYLRDRGIKDTSDQRVWAFLGDGEMD EPESRGLAHIAATEGLDNLTFVVNCNLQRLDGPVRGNGKIIQELESFFRGAGWNVIKVVWGREWDALLHADRDGALVNLM NTTADGDYQTYKANDGAYVREHFFGRDPRTKELVKDLTDAQVWNLKRGGHDYRKVYAAYRAATEHKGQPTVILAKTIKGY TLGKHFEGRNATHQMKKLTLDDLKDFRDKQRIPISDAQLEENPYLPPYYHPGPEAPEIRYMLDRRRALGGFVPSRRTTSR PLTLPGSETYASIKKGSGKQEVATTMALVRTFKELLRDKNIGNRIVPIIPDEARTFGMDSWFPSLKIYNRNGQLYTSVDA ELMLAYKESAQGQILHEGINEAGSTASFTAVGTAYSTHDEPMIPLYIFYSMFGFQRTGDGLWAAADQMARGFVLGATAGR TTLTGEGLQHADGHSLLLASTNPAVVAYDPAFAYEIAHIVEHGLQRMYGENSENVYFYITLYNEPYVQPAEPENVDTEGI LRGIYKFRAAPEARTHRANILASGVSVPDALRAADLLAEQWDVAADVWSVTSWGELNRDGLAIDHQALRHPDRPKGVPYV TKALEGAQGPKVAVSDWMHAVPEQIRPWVPGMYRTLGADGFGISDTRPAARRFFNTDAESVVVAVLEALADEGSVDRQVA VTAAAQYKIDDVSAADVSYKDTGSA
Sequences:
>Translated_905_residues MIREGVASYLPDIDPDETGEWLESFDGLLARSGPARARYLMLRLLERANAGRVAIPALTSTDYVNTIPTENEPWFPGDED TERRFRAWIRWNAAIMVHRAQRPGVGVGGHISTYASSAALYEVGFNHFFRGNAHPGGGDQIFIQGHASPGIYARAFLEGR LTTDQLDGFRQEKSHPGGGLPSYPHPRLMPDFWQFPTVSMGLGPMNAIMQARFNHYLRDRGIKDTSDQRVWAFLGDGEMD EPESRGLAHIAATEGLDNLTFVVNCNLQRLDGPVRGNGKIIQELESFFRGAGWNVIKVVWGREWDALLHADRDGALVNLM NTTADGDYQTYKANDGAYVREHFFGRDPRTKELVKDLTDAQVWNLKRGGHDYRKVYAAYRAATEHKGQPTVILAKTIKGY TLGKHFEGRNATHQMKKLTLDDLKDFRDKQRIPISDAQLEENPYLPPYYHPGPEAPEIRYMLDRRRALGGFVPSRRTTSR PLTLPGSETYASIKKGSGKQEVATTMALVRTFKELLRDKNIGNRIVPIIPDEARTFGMDSWFPSLKIYNRNGQLYTSVDA ELMLAYKESAQGQILHEGINEAGSTASFTAVGTAYSTHDEPMIPLYIFYSMFGFQRTGDGLWAAADQMARGFVLGATAGR TTLTGEGLQHADGHSLLLASTNPAVVAYDPAFAYEIAHIVEHGLQRMYGENSENVYFYITLYNEPYVQPAEPENVDTEGI LRGIYKFRAAPEARTHRANILASGVSVPDALRAADLLAEQWDVAADVWSVTSWGELNRDGLAIDHQALRHPDRPKGVPYV TKALEGAQGPKVAVSDWMHAVPEQIRPWVPGMYRTLGADGFGISDTRPAARRFFNTDAESVVVAVLEALADEGSVDRQVA VTAAAQYKIDDVSAADVSYKDTGSA >Mature_905_residues MIREGVASYLPDIDPDETGEWLESFDGLLARSGPARARYLMLRLLERANAGRVAIPALTSTDYVNTIPTENEPWFPGDED TERRFRAWIRWNAAIMVHRAQRPGVGVGGHISTYASSAALYEVGFNHFFRGNAHPGGGDQIFIQGHASPGIYARAFLEGR LTTDQLDGFRQEKSHPGGGLPSYPHPRLMPDFWQFPTVSMGLGPMNAIMQARFNHYLRDRGIKDTSDQRVWAFLGDGEMD EPESRGLAHIAATEGLDNLTFVVNCNLQRLDGPVRGNGKIIQELESFFRGAGWNVIKVVWGREWDALLHADRDGALVNLM NTTADGDYQTYKANDGAYVREHFFGRDPRTKELVKDLTDAQVWNLKRGGHDYRKVYAAYRAATEHKGQPTVILAKTIKGY TLGKHFEGRNATHQMKKLTLDDLKDFRDKQRIPISDAQLEENPYLPPYYHPGPEAPEIRYMLDRRRALGGFVPSRRTTSR PLTLPGSETYASIKKGSGKQEVATTMALVRTFKELLRDKNIGNRIVPIIPDEARTFGMDSWFPSLKIYNRNGQLYTSVDA ELMLAYKESAQGQILHEGINEAGSTASFTAVGTAYSTHDEPMIPLYIFYSMFGFQRTGDGLWAAADQMARGFVLGATAGR TTLTGEGLQHADGHSLLLASTNPAVVAYDPAFAYEIAHIVEHGLQRMYGENSENVYFYITLYNEPYVQPAEPENVDTEGI LRGIYKFRAAPEARTHRANILASGVSVPDALRAADLLAEQWDVAADVWSVTSWGELNRDGLAIDHQALRHPDRPKGVPYV TKALEGAQGPKVAVSDWMHAVPEQIRPWVPGMYRTLGADGFGISDTRPAARRFFNTDAESVVVAVLEALADEGSVDRQVA VTAAAQYKIDDVSAADVSYKDTGSA
Specific function: The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components:pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydroge
COG id: COG2609
COG function: function code C; Pyruvate dehydrogenase complex, dehydrogenase (E1) component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786304, Length=882, Percent_Identity=52.8344671201814, Blast_Score=931, Evalue=0.0,
Paralogues:
None
Copy number: 1140 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 400 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004660 - InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005474 [H]
Pfam domain/function: PF00456 Transketolase_N [H]
EC number: =1.2.4.1 [H]
Molecular weight: Translated: 100436; Mature: 100436
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIREGVASYLPDIDPDETGEWLESFDGLLARSGPARARYLMLRLLERANAGRVAIPALTS CCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEECC TDYVNTIPTENEPWFPGDEDTERRFRAWIRWNAAIMVHRAQRPGVGVGGHISTYASSAAL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHEECEEEEEEECCCCCCCCCCCHHHHHCCHHH YEVGFNHFFRGNAHPGGGDQIFIQGHASPGIYARAFLEGRLTTDQLDGFRQEKSHPGGGL HHHCHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEHHHCCCCHHHHHCHHHHCCCCCCCC PSYPHPRLMPDFWQFPTVSMGLGPMNAIMQARFNHYLRDRGIKDTSDQRVWAFLGDGEMD CCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC EPESRGLAHIAATEGLDNLTFVVNCNLQRLDGPVRGNGKIIQELESFFRGAGWNVIKVVW CCHHCCEEEEEECCCCCCEEEEEECCHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEE GREWDALLHADRDGALVNLMNTTADGDYQTYKANDGAYVREHFFGRDPRTKELVKDLTDA CCCHHHHEECCCCCCEEEEEECCCCCCEEEEECCCCCHHHHHHCCCCCCHHHHHHHHHHH QVWNLKRGGHDYRKVYAAYRAATEHKGQPTVILAKTIKGYTLGKHFEGRNATHQMKKLTL HHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCH DDLKDFRDKQRIPISDAQLEENPYLPPYYHPGPEAPEIRYMLDRRRALGGFVPSRRTTSR HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC PLTLPGSETYASIKKGSGKQEVATTMALVRTFKELLRDKNIGNRIVPIIPDEARTFGMDS CEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHCCCCC WFPSLKIYNRNGQLYTSVDAELMLAYKESAQGQILHEGINEAGSTASFTAVGTAYSTHDE CCCCEEEECCCCCEEEECCCEEEEEEHHCCCCHHHHHHHHHCCCCCEEEEECCEECCCCC PMIPLYIFYSMFGFQRTGDGLWAAADQMARGFVLGATAGRTTLTGEGLQHADGHSLLLAS CCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEEECCCCCCEECCCCCCCCCCCEEEEEC TNPAVVAYDPAFAYEIAHIVEHGLQRMYGENSENVYFYITLYNEPYVQPAEPENVDTEGI CCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHH LRGIYKFRAAPEARTHRANILASGVSVPDALRAADLLAEQWDVAADVWSVTSWGELNRDG HHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC LAIDHQALRHPDRPKGVPYVTKALEGAQGPKVAVSDWMHAVPEQIRPWVPGMYRTLGADG CEECHHHHCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCC FGISDTRPAARRFFNTDAESVVVAVLEALADEGSVDRQVAVTAAAQYKIDDVSAADVSYK CCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCCCCCCC DTGSA CCCCC >Mature Secondary Structure MIREGVASYLPDIDPDETGEWLESFDGLLARSGPARARYLMLRLLERANAGRVAIPALTS CCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEECC TDYVNTIPTENEPWFPGDEDTERRFRAWIRWNAAIMVHRAQRPGVGVGGHISTYASSAAL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHEECEEEEEEECCCCCCCCCCCHHHHHCCHHH YEVGFNHFFRGNAHPGGGDQIFIQGHASPGIYARAFLEGRLTTDQLDGFRQEKSHPGGGL HHHCHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEHHHCCCCHHHHHCHHHHCCCCCCCC PSYPHPRLMPDFWQFPTVSMGLGPMNAIMQARFNHYLRDRGIKDTSDQRVWAFLGDGEMD CCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC EPESRGLAHIAATEGLDNLTFVVNCNLQRLDGPVRGNGKIIQELESFFRGAGWNVIKVVW CCHHCCEEEEEECCCCCCEEEEEECCHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEE GREWDALLHADRDGALVNLMNTTADGDYQTYKANDGAYVREHFFGRDPRTKELVKDLTDA CCCHHHHEECCCCCCEEEEEECCCCCCEEEEECCCCCHHHHHHCCCCCCHHHHHHHHHHH QVWNLKRGGHDYRKVYAAYRAATEHKGQPTVILAKTIKGYTLGKHFEGRNATHQMKKLTL HHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCH DDLKDFRDKQRIPISDAQLEENPYLPPYYHPGPEAPEIRYMLDRRRALGGFVPSRRTTSR HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC PLTLPGSETYASIKKGSGKQEVATTMALVRTFKELLRDKNIGNRIVPIIPDEARTFGMDS CEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHCCCCC WFPSLKIYNRNGQLYTSVDAELMLAYKESAQGQILHEGINEAGSTASFTAVGTAYSTHDE CCCCEEEECCCCCEEEECCCEEEEEEHHCCCCHHHHHHHHHCCCCCEEEEECCEECCCCC PMIPLYIFYSMFGFQRTGDGLWAAADQMARGFVLGATAGRTTLTGEGLQHADGHSLLLAS CCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEEECCCCCCEECCCCCCCCCCCEEEEEC TNPAVVAYDPAFAYEIAHIVEHGLQRMYGENSENVYFYITLYNEPYVQPAEPENVDTEGI CCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHH LRGIYKFRAAPEARTHRANILASGVSVPDALRAADLLAEQWDVAADVWSVTSWGELNRDG HHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC LAIDHQALRHPDRPKGVPYVTKALEGAQGPKVAVSDWMHAVPEQIRPWVPGMYRTLGADG CEECHHHHCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCC FGISDTRPAARRFFNTDAESVVVAVLEALADEGSVDRQVAVTAAAQYKIDDVSAADVSYK CCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCCCCCCC DTGSA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA