| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628933
Identifier: 169628933
GI number: 169628933
Start: 1843737
End: 1844627
Strand: Reverse
Name: 169628933
Synonym: MAB_1845c
Alternate gene names: NA
Gene position: 1844627-1843737 (Counterclockwise)
Preceding gene: 169628938
Following gene: 169628930
Centisome position: 36.4
GC content: 64.98
Gene sequence:
>891_bases ATGCCGGCCGAGACAGCGTCGGAGGACTCGGAGGATCCGGTATCGATCCTTCGCCCCGTCATCGCCGTGATCACCACGGT GGGAACACCGTTGACGATGATCACCGCGCTGCTGCTGTATTTCGGTTGGGCACGCAGCGACGCGCAGTCCCAGTGGATGG GCATCGAGGTAAGCCTGTTTCGCTTCAGCACTCAGGACTATGTGCTGCGCAGCATCAGCACCCTGTACCTGCCGATCCTG GCGACGGCGGTCATCGGAATCGCCTGGCTGGCAGCGCATCGCGCGGTGACCGAGAAGATCGAACGCGACGGCATGACCGA CACCATCCGGGCGATCTGCCGGGTGACGATGCTCGGCGGGCTAGCCGTCGCGATCCTGGGAGTGGTGATGCCCGCGCTCA CACGCCACTGGGAGCCCGGTTCGGTGGTGTGGCCGCTGATGATCGCGATCGGCACGGCACTGGCGGTGTACGGCAGACAT GTGAGCCGTCAGGGGCGAGAACGCGCACGGCCCCGTAATGCCATTGCCCGTCCGCACGATGTGCTCGAAGCGGTGCTGGT CGGCATTGTGATTGCGGCGGCGCTGTTCTGGGCAGTGCAGGGATATGCCGATATCGTCGGCCGGGGATACGCGCAGCGCT ATGAAGATTCGGTGTCGTCGCTGCCCCGCGCGACGGCGGTCAGCGAAAGCCCGTTGGGTATCGACTCTCCCGTGGTACGT ACCGAGCAGATCGCCGCCGGCCCCAAAACGCTGTACCGCACCACCGGCTTACGGCTGCTGGCCGAATCCGGGGGCAGACT GTTCCTGATGACCGAGGGCTGGACCATCCGCGACGGCAGCATCATCGTGCTGGACGAGAACGATTCGGTGCACTGGCAGT TCTCGCACTGA
Upstream 100 bases:
>100_bases TTCGTCGGGGACGAGGACGTCAGCCAGGATAGGCGCGACGGGCCTGAGCGGCAAGGGAATTTTCCCGCCAGGTCAGGGCC GTCGCGCGTAGCATGCTGCC
Downstream 100 bases:
>100_bases CCTCATCGCGCAGACGGCGTTGTCGTTGTGGTCGTCGTCGTCGTGGTCGTGGTCGTCGTGGTCGTGGTCGTCGATGAGGT GGTGCTCGACGTGGTGGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MPAETASEDSEDPVSILRPVIAVITTVGTPLTMITALLLYFGWARSDAQSQWMGIEVSLFRFSTQDYVLRSISTLYLPIL ATAVIGIAWLAAHRAVTEKIERDGMTDTIRAICRVTMLGGLAVAILGVVMPALTRHWEPGSVVWPLMIAIGTALAVYGRH VSRQGRERARPRNAIARPHDVLEAVLVGIVIAAALFWAVQGYADIVGRGYAQRYEDSVSSLPRATAVSESPLGIDSPVVR TEQIAAGPKTLYRTTGLRLLAESGGRLFLMTEGWTIRDGSIIVLDENDSVHWQFSH
Sequences:
>Translated_296_residues MPAETASEDSEDPVSILRPVIAVITTVGTPLTMITALLLYFGWARSDAQSQWMGIEVSLFRFSTQDYVLRSISTLYLPIL ATAVIGIAWLAAHRAVTEKIERDGMTDTIRAICRVTMLGGLAVAILGVVMPALTRHWEPGSVVWPLMIAIGTALAVYGRH VSRQGRERARPRNAIARPHDVLEAVLVGIVIAAALFWAVQGYADIVGRGYAQRYEDSVSSLPRATAVSESPLGIDSPVVR TEQIAAGPKTLYRTTGLRLLAESGGRLFLMTEGWTIRDGSIIVLDENDSVHWQFSH >Mature_295_residues PAETASEDSEDPVSILRPVIAVITTVGTPLTMITALLLYFGWARSDAQSQWMGIEVSLFRFSTQDYVLRSISTLYLPILA TAVIGIAWLAAHRAVTEKIERDGMTDTIRAICRVTMLGGLAVAILGVVMPALTRHWEPGSVVWPLMIAIGTALAVYGRHV SRQGRERARPRNAIARPHDVLEAVLVGIVIAAALFWAVQGYADIVGRGYAQRYEDSVSSLPRATAVSESPLGIDSPVVRT EQIAAGPKTLYRTTGLRLLAESGGRLFLMTEGWTIRDGSIIVLDENDSVHWQFSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32278; Mature: 32147
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAETASEDSEDPVSILRPVIAVITTVGTPLTMITALLLYFGWARSDAQSQWMGIEVSLF CCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHCCEEEEEE RFSTQDYVLRSISTLYLPILATAVIGIAWLAAHRAVTEKIERDGMTDTIRAICRVTMLGG EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LAVAILGVVMPALTRHWEPGSVVWPLMIAIGTALAVYGRHVSRQGRERARPRNAIARPHD HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHH VLEAVLVGIVIAAALFWAVQGYADIVGRGYAQRYEDSVSSLPRATAVSESPLGIDSPVVR HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCHH TEQIAAGPKTLYRTTGLRLLAESGGRLFLMTEGWTIRDGSIIVLDENDSVHWQFSH HHHHHCCHHHHHHHHHHHHEECCCCEEEEEECCEEEECCEEEEEECCCCEEEEECC >Mature Secondary Structure PAETASEDSEDPVSILRPVIAVITTVGTPLTMITALLLYFGWARSDAQSQWMGIEVSLF CCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHCCEEEEEE RFSTQDYVLRSISTLYLPILATAVIGIAWLAAHRAVTEKIERDGMTDTIRAICRVTMLGG EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LAVAILGVVMPALTRHWEPGSVVWPLMIAIGTALAVYGRHVSRQGRERARPRNAIARPHD HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHH VLEAVLVGIVIAAALFWAVQGYADIVGRGYAQRYEDSVSSLPRATAVSESPLGIDSPVVR HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCHH TEQIAAGPKTLYRTTGLRLLAESGGRLFLMTEGWTIRDGSIIVLDENDSVHWQFSH HHHHHCCHHHHHHHHHHHHEECCCCEEEEEECCEEEECCEEEEEECCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA