| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628928
Identifier: 169628928
GI number: 169628928
Start: 1839752
End: 1840549
Strand: Reverse
Name: 169628928
Synonym: MAB_1840c
Alternate gene names: NA
Gene position: 1840549-1839752 (Counterclockwise)
Preceding gene: 169628929
Following gene: 169628925
Centisome position: 36.32
GC content: 66.04
Gene sequence:
>798_bases ATGGGCTTCGGCATGGCCGCAGCTGCTTTGCCCCTTCCCAAGGCTCAGGCCGATCGGGTGCATCCTCCGGCGGCACCGCC CGACGCCCAGTCCAGCGGTTTTGTGTTCCGTGACGAGTTCGACGGCCCCGCCGGTTCGGCGCCCGACGGTTCCAAGTGGG TGGCCGCGAAGTTCCGCGAGCGCATCAAGAACCCGGTGTTCTGGGATCGCCCCGAGAACATGGGCGAGTACCGCGACAGC CGCACCAACATCTTCCTCGACGGAAACTCCAACCTGGTGATCCGTGCGACCAAGGAAGGCAACAAGTACTTCAGCGGCAA GCTGCACGGCACCTTCCGCGGCGGCATGGGCCACACCTTCGAGGCACGCATCAAGTTCAACTGCTTGACCGACGGTTGCT GGCCGGCCTGGTGGCTGCTGAACGACAACCCGGAGCGCGGCGGCGAGATCGACATGGCCGAGTGGTACGGCAACCGCGAC TGGCCCTCGGGCACCACGGTGCACGCACGCCTGGACGGCACCTCCTTCGAGACGCTGCCGGTGCCCATCGACAGCAACTG GCACACCTGGCGCTGCACCTGGACCGAGGCCGGACTGTACTTCTGGATGGACTACCACGACGGCATGGAGCCGTACCTGA CGGTCGACGCCAATTCCCTTGACGATTGGCCGTTTAACGATCCGGGCTACACGCTGCAGCCGATGCTGAACCTGGCTGTC GCCGGTTCCGGCGGTGGCGATCCGGCCGGCGGCTCGTACCCGGCGGAGATGCTCGTCGACTACGTGCGCGTCTGGTAG
Upstream 100 bases:
>100_bases CCACTAGCAGCCAAAATGGCCGGGGCTGCGCCCAACGCCGGGGAACAACCATTATCGTTTCGGGGTGCCTGAAATGGATC GCCGTAAATTGATACTGACC
Downstream 100 bases:
>100_bases CCGGGCGGAAGTTGTTGGCGGCGGCCTGGTGTCCGGGCCGCCGCCGAACTATCCCGCCTTCTTGGCGCCGTACATCGCGC CGTCAGCCTCGACCAAAAGG
Product: putative beta-glucanase
Products: NA
Alternate protein names: Glycoside Hydrolase Family Protein; Secreted Protein; Beta-Glucanase; Glycoside Hydrolase Family; Glycosyl Hydrolases Family Protein
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MGFGMAAAALPLPKAQADRVHPPAAPPDAQSSGFVFRDEFDGPAGSAPDGSKWVAAKFRERIKNPVFWDRPENMGEYRDS RTNIFLDGNSNLVIRATKEGNKYFSGKLHGTFRGGMGHTFEARIKFNCLTDGCWPAWWLLNDNPERGGEIDMAEWYGNRD WPSGTTVHARLDGTSFETLPVPIDSNWHTWRCTWTEAGLYFWMDYHDGMEPYLTVDANSLDDWPFNDPGYTLQPMLNLAV AGSGGGDPAGGSYPAEMLVDYVRVW
Sequences:
>Translated_265_residues MGFGMAAAALPLPKAQADRVHPPAAPPDAQSSGFVFRDEFDGPAGSAPDGSKWVAAKFRERIKNPVFWDRPENMGEYRDS RTNIFLDGNSNLVIRATKEGNKYFSGKLHGTFRGGMGHTFEARIKFNCLTDGCWPAWWLLNDNPERGGEIDMAEWYGNRD WPSGTTVHARLDGTSFETLPVPIDSNWHTWRCTWTEAGLYFWMDYHDGMEPYLTVDANSLDDWPFNDPGYTLQPMLNLAV AGSGGGDPAGGSYPAEMLVDYVRVW >Mature_264_residues GFGMAAAALPLPKAQADRVHPPAAPPDAQSSGFVFRDEFDGPAGSAPDGSKWVAAKFRERIKNPVFWDRPENMGEYRDSR TNIFLDGNSNLVIRATKEGNKYFSGKLHGTFRGGMGHTFEARIKFNCLTDGCWPAWWLLNDNPERGGEIDMAEWYGNRDW PSGTTVHARLDGTSFETLPVPIDSNWHTWRCTWTEAGLYFWMDYHDGMEPYLTVDANSLDDWPFNDPGYTLQPMLNLAVA GSGGGDPAGGSYPAEMLVDYVRVW
Specific function: Unknown
COG id: COG2273
COG function: function code G; Beta-glucanase/Beta-glucan synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29581; Mature: 29450
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFGMAAAALPLPKAQADRVHPPAAPPDAQSSGFVFRDEFDGPAGSAPDGSKWVAAKFRE CCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHH RIKNPVFWDRPENMGEYRDSRTNIFLDGNSNLVIRATKEGNKYFSGKLHGTFRGGMGHTF HHCCCCCCCCCCCHHHHCCCCCEEEEECCCCEEEEEECCCCEEEEEEEEEEEECCCCCEE EARIKFNCLTDGCWPAWWLLNDNPERGGEIDMAEWYGNRDWPSGTTVHARLDGTSFETLP EEEEEEEEEECCCCEEEEEECCCCCCCCEEEHHHHCCCCCCCCCCEEEEEECCCCCEEEE VPIDSNWHTWRCTWTEAGLYFWMDYHDGMEPYLTVDANSLDDWPFNDPGYTLQPMLNLAV EEECCCCCEEEEEEECCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCEECCEEEEEEE AGSGGGDPAGGSYPAEMLVDYVRVW ECCCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure GFGMAAAALPLPKAQADRVHPPAAPPDAQSSGFVFRDEFDGPAGSAPDGSKWVAAKFRE CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHH RIKNPVFWDRPENMGEYRDSRTNIFLDGNSNLVIRATKEGNKYFSGKLHGTFRGGMGHTF HHCCCCCCCCCCCHHHHCCCCCEEEEECCCCEEEEEECCCCEEEEEEEEEEEECCCCCEE EARIKFNCLTDGCWPAWWLLNDNPERGGEIDMAEWYGNRDWPSGTTVHARLDGTSFETLP EEEEEEEEEECCCCEEEEEECCCCCCCCEEEHHHHCCCCCCCCCCEEEEEECCCCCEEEE VPIDSNWHTWRCTWTEAGLYFWMDYHDGMEPYLTVDANSLDDWPFNDPGYTLQPMLNLAV EEECCCCCEEEEEEECCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCEECCEEEEEEE AGSGGGDPAGGSYPAEMLVDYVRVW ECCCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA