Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

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The map label for this gene is 169628915

Identifier: 169628915

GI number: 169628915

Start: 1829615

End: 1830310

Strand: Reverse

Name: 169628915

Synonym: MAB_1827c

Alternate gene names: NA

Gene position: 1830310-1829615 (Counterclockwise)

Preceding gene: 169628923

Following gene: 169628913

Centisome position: 36.12

GC content: 61.64

Gene sequence:

>696_bases
GTGAGTGCCGAAGACGACGAAGACGAACAAGAGCCGACAAGGGCGTCACCAACCGCCCTAGCTGAAACGGGCGTCGTGGA
AATCACCCCGGCTGCTTGGTCCGACTCAGACGAAATTGACGACATTGATCCGTACGAGGATCCCGTGCGGCGCAATTGGC
TAATCAGCGGCGCCATATTTGCGGCGACAGCCGCGGTTGCGGGACTCGCGGCAGGAGGGGCGTTCGTCTTCCTCCGTCAG
GAACGAGGCAAGACACCCGTTACGACGAGCACGGTGTTGATCGCCTCCCCGCCAGCACCGACGTCCGCTGTCGTGCTACC
GCCGCCACCAACGCAAAGCCGACCCCCCACGCCCATCGAGCTGTCGGCCACGGGCGACTCGGTGTATGTGAGCACCAAAT
CGGGCAAGACCGCCTGCCAGGTCACGGTAAATACCGTCTCGTGCATCGTGAGATTCGTTGGGCGCACACCAATTCGATAC
GGCGTGCCAACCAACGTGGTGATGATCACGTCCGGCGGGATCATGGATTGGACAGTCGGCGACGGGGGCCAGCTGCAAAC
CCACACTTTGAATTACGGAACGCTCTATCACGCTCTAGGTTGGACCATCACGCCGACCAGTGAGGGCACCACATTTACGA
ACGATGCGACCGGTCGCGGGATGAGCGTGAACGTCGATGGCGCCAGGGCGTTCTAG

Upstream 100 bases:

>100_bases
AGGCGGGACTCAGAATTCGGGCTACGAAACGGATGCGACGCGATCTTGATGCGGCGTAGAATTCGCTGGTCAGCAGGCAG
TTATGGAGGATTGATAGTCC

Downstream 100 bases:

>100_bases
TCGCAGCCTACAAACGGGGTTCGCTTACCCAACGCTCAGCCCAGCTAGATTCGTCGATTCAAGATTTGATAGACAACTAC
TCTGCATACGGAAATTAGAT

Product: bacteriophage protein

Products: NA

Alternate protein names: LpqJ Protein; Bacteriophage Protein; Lipoprotein

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MSAEDDEDEQEPTRASPTALAETGVVEITPAAWSDSDEIDDIDPYEDPVRRNWLISGAIFAATAAVAGLAAGGAFVFLRQ
ERGKTPVTTSTVLIASPPAPTSAVVLPPPPTQSRPPTPIELSATGDSVYVSTKSGKTACQVTVNTVSCIVRFVGRTPIRY
GVPTNVVMITSGGIMDWTVGDGGQLQTHTLNYGTLYHALGWTITPTSEGTTFTNDATGRGMSVNVDGARAF

Sequences:

>Translated_231_residues
MSAEDDEDEQEPTRASPTALAETGVVEITPAAWSDSDEIDDIDPYEDPVRRNWLISGAIFAATAAVAGLAAGGAFVFLRQ
ERGKTPVTTSTVLIASPPAPTSAVVLPPPPTQSRPPTPIELSATGDSVYVSTKSGKTACQVTVNTVSCIVRFVGRTPIRY
GVPTNVVMITSGGIMDWTVGDGGQLQTHTLNYGTLYHALGWTITPTSEGTTFTNDATGRGMSVNVDGARAF
>Mature_230_residues
SAEDDEDEQEPTRASPTALAETGVVEITPAAWSDSDEIDDIDPYEDPVRRNWLISGAIFAATAAVAGLAAGGAFVFLRQE
RGKTPVTTSTVLIASPPAPTSAVVLPPPPTQSRPPTPIELSATGDSVYVSTKSGKTACQVTVNTVSCIVRFVGRTPIRYG
VPTNVVMITSGGIMDWTVGDGGQLQTHTLNYGTLYHALGWTITPTSEGTTFTNDATGRGMSVNVDGARAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24202; Mature: 24071

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAEDDEDEQEPTRASPTALAETGVVEITPAAWSDSDEIDDIDPYEDPVRRNWLISGAIF
CCCCCCCCCCCCCCCCCCHHHHCCEEEEECCCCCCCCCCCCCCCCCCCHHHEEEEEHHHH
AATAAVAGLAAGGAFVFLRQERGKTPVTTSTVLIASPPAPTSAVVLPPPPTQSRPPTPIE
HHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCEEEECCCCCCCCCCCCEE
LSATGDSVYVSTKSGKTACQVTVNTVSCIVRFVGRTPIRYGVPTNVVMITSGGIMDWTVG
EEECCCEEEEEECCCCEEEEEEHHHHHHHHHHHCCCCEEECCCCCEEEEECCCEEEEEEC
DGGQLQTHTLNYGTLYHALGWTITPTSEGTTFTNDATGRGMSVNVDGARAF
CCCEEEEEEECCCCEEHHCCCEEECCCCCCEEECCCCCCCEEEECCCCCCC
>Mature Secondary Structure 
SAEDDEDEQEPTRASPTALAETGVVEITPAAWSDSDEIDDIDPYEDPVRRNWLISGAIF
CCCCCCCCCCCCCCCCCHHHHCCEEEEECCCCCCCCCCCCCCCCCCCHHHEEEEEHHHH
AATAAVAGLAAGGAFVFLRQERGKTPVTTSTVLIASPPAPTSAVVLPPPPTQSRPPTPIE
HHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCEEEECCCCCCCCCCCCEE
LSATGDSVYVSTKSGKTACQVTVNTVSCIVRFVGRTPIRYGVPTNVVMITSGGIMDWTVG
EEECCCEEEEEECCCCEEEEEEHHHHHHHHHHHCCCCEEECCCCCEEEEECCCEEEEEEC
DGGQLQTHTLNYGTLYHALGWTITPTSEGTTFTNDATGRGMSVNVDGARAF
CCCEEEEEEECCCCEEHHCCCEEECCCCCCEEECCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA