| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628915
Identifier: 169628915
GI number: 169628915
Start: 1829615
End: 1830310
Strand: Reverse
Name: 169628915
Synonym: MAB_1827c
Alternate gene names: NA
Gene position: 1830310-1829615 (Counterclockwise)
Preceding gene: 169628923
Following gene: 169628913
Centisome position: 36.12
GC content: 61.64
Gene sequence:
>696_bases GTGAGTGCCGAAGACGACGAAGACGAACAAGAGCCGACAAGGGCGTCACCAACCGCCCTAGCTGAAACGGGCGTCGTGGA AATCACCCCGGCTGCTTGGTCCGACTCAGACGAAATTGACGACATTGATCCGTACGAGGATCCCGTGCGGCGCAATTGGC TAATCAGCGGCGCCATATTTGCGGCGACAGCCGCGGTTGCGGGACTCGCGGCAGGAGGGGCGTTCGTCTTCCTCCGTCAG GAACGAGGCAAGACACCCGTTACGACGAGCACGGTGTTGATCGCCTCCCCGCCAGCACCGACGTCCGCTGTCGTGCTACC GCCGCCACCAACGCAAAGCCGACCCCCCACGCCCATCGAGCTGTCGGCCACGGGCGACTCGGTGTATGTGAGCACCAAAT CGGGCAAGACCGCCTGCCAGGTCACGGTAAATACCGTCTCGTGCATCGTGAGATTCGTTGGGCGCACACCAATTCGATAC GGCGTGCCAACCAACGTGGTGATGATCACGTCCGGCGGGATCATGGATTGGACAGTCGGCGACGGGGGCCAGCTGCAAAC CCACACTTTGAATTACGGAACGCTCTATCACGCTCTAGGTTGGACCATCACGCCGACCAGTGAGGGCACCACATTTACGA ACGATGCGACCGGTCGCGGGATGAGCGTGAACGTCGATGGCGCCAGGGCGTTCTAG
Upstream 100 bases:
>100_bases AGGCGGGACTCAGAATTCGGGCTACGAAACGGATGCGACGCGATCTTGATGCGGCGTAGAATTCGCTGGTCAGCAGGCAG TTATGGAGGATTGATAGTCC
Downstream 100 bases:
>100_bases TCGCAGCCTACAAACGGGGTTCGCTTACCCAACGCTCAGCCCAGCTAGATTCGTCGATTCAAGATTTGATAGACAACTAC TCTGCATACGGAAATTAGAT
Product: bacteriophage protein
Products: NA
Alternate protein names: LpqJ Protein; Bacteriophage Protein; Lipoprotein
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MSAEDDEDEQEPTRASPTALAETGVVEITPAAWSDSDEIDDIDPYEDPVRRNWLISGAIFAATAAVAGLAAGGAFVFLRQ ERGKTPVTTSTVLIASPPAPTSAVVLPPPPTQSRPPTPIELSATGDSVYVSTKSGKTACQVTVNTVSCIVRFVGRTPIRY GVPTNVVMITSGGIMDWTVGDGGQLQTHTLNYGTLYHALGWTITPTSEGTTFTNDATGRGMSVNVDGARAF
Sequences:
>Translated_231_residues MSAEDDEDEQEPTRASPTALAETGVVEITPAAWSDSDEIDDIDPYEDPVRRNWLISGAIFAATAAVAGLAAGGAFVFLRQ ERGKTPVTTSTVLIASPPAPTSAVVLPPPPTQSRPPTPIELSATGDSVYVSTKSGKTACQVTVNTVSCIVRFVGRTPIRY GVPTNVVMITSGGIMDWTVGDGGQLQTHTLNYGTLYHALGWTITPTSEGTTFTNDATGRGMSVNVDGARAF >Mature_230_residues SAEDDEDEQEPTRASPTALAETGVVEITPAAWSDSDEIDDIDPYEDPVRRNWLISGAIFAATAAVAGLAAGGAFVFLRQE RGKTPVTTSTVLIASPPAPTSAVVLPPPPTQSRPPTPIELSATGDSVYVSTKSGKTACQVTVNTVSCIVRFVGRTPIRYG VPTNVVMITSGGIMDWTVGDGGQLQTHTLNYGTLYHALGWTITPTSEGTTFTNDATGRGMSVNVDGARAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24202; Mature: 24071
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAEDDEDEQEPTRASPTALAETGVVEITPAAWSDSDEIDDIDPYEDPVRRNWLISGAIF CCCCCCCCCCCCCCCCCCHHHHCCEEEEECCCCCCCCCCCCCCCCCCCHHHEEEEEHHHH AATAAVAGLAAGGAFVFLRQERGKTPVTTSTVLIASPPAPTSAVVLPPPPTQSRPPTPIE HHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCEEEECCCCCCCCCCCCEE LSATGDSVYVSTKSGKTACQVTVNTVSCIVRFVGRTPIRYGVPTNVVMITSGGIMDWTVG EEECCCEEEEEECCCCEEEEEEHHHHHHHHHHHCCCCEEECCCCCEEEEECCCEEEEEEC DGGQLQTHTLNYGTLYHALGWTITPTSEGTTFTNDATGRGMSVNVDGARAF CCCEEEEEEECCCCEEHHCCCEEECCCCCCEEECCCCCCCEEEECCCCCCC >Mature Secondary Structure SAEDDEDEQEPTRASPTALAETGVVEITPAAWSDSDEIDDIDPYEDPVRRNWLISGAIF CCCCCCCCCCCCCCCCCHHHHCCEEEEECCCCCCCCCCCCCCCCCCCHHHEEEEEHHHH AATAAVAGLAAGGAFVFLRQERGKTPVTTSTVLIASPPAPTSAVVLPPPPTQSRPPTPIE HHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCEEEECCCCCCCCCCCCEE LSATGDSVYVSTKSGKTACQVTVNTVSCIVRFVGRTPIRYGVPTNVVMITSGGIMDWTVG EEECCCEEEEEECCCCEEEEEEHHHHHHHHHHHCCCCEEECCCCCEEEEECCCEEEEEEC DGGQLQTHTLNYGTLYHALGWTITPTSEGTTFTNDATGRGMSVNVDGARAF CCCEEEEEEECCCCEEHHCCCEEECCCCCCEEECCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA