| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628690
Identifier: 169628690
GI number: 169628690
Start: 1629453
End: 1630148
Strand: Reverse
Name: 169628690
Synonym: MAB_1600c
Alternate gene names: NA
Gene position: 1630148-1629453 (Counterclockwise)
Preceding gene: 169628691
Following gene: 169628683
Centisome position: 32.17
GC content: 65.66
Gene sequence:
>696_bases GTGTCTGATCTCGGATCCCATCCCGCGGCCAGTGCCAGCCTCAAGGATTTCTGCATCGACGCAACGTCGCCGGTGCCCGT CGCCAAATTTTGGGCCGCCGCCATCGGGGGTGAGGTCGATGTCGACGACGCCGGGGAGGCGTTCATTCGGCGCGGCAAGG CCGTCGACATCTGGGTCAATCGCGTGCCGGAGGCCAAGGGCGTCAAGAACCGCGTGCATTTCGATGTATACACCCGCGCC GTAGCCGACCTCGTCGCACTGGGCGCAACACTGCTGGAAGAACACGAGCCGGACCGGGTGGTGATGGCGGACATCGAGGG CAACGAGTTCTGCGTCTTCCTCGACCCAAATCTCGAAAGCGATACACCGGCAAGGCTCTTCGCGCTCTGCACCGATAGCG ACAAACCTGCCGAAATAGCGCGCTGGTGGCACGACCGCGTCGGCGGCACACTCGCCCCCGGCCCCGACGGAACCCTGCGC TGGTTGCGCGAGGCGGCCGGTTGGGGCGATCTGATCTGGAAATTCGTCCGGGTTGCCGACGCGCGCGTGGTCAAGAACCG CTGGCACTGGGATGTGCACGGCGATGCCGCCGAGTTGGTACGCGAGGGCGCTCGGGCTCTGCGCGGTCCCGACACCGACA TCCGCTGGACGGTGCTCATCGATCCAGACGGCAACGAGTTCTGCGCCTTCGGTTAG
Upstream 100 bases:
>100_bases GGCCTCGGCCCGGATACCAGCCTCGGTCTTCTGGCGGCAGCTGAGCAGCATTGCCGGATATGAGGCCGGTAATCTCGCGG TTCGCCCCTAGGATTCCTTT
Downstream 100 bases:
>100_bases GCCCCCGTGCGCACCTTGCCCGGCGTCGCCAGGGCCGCCGCGATAGCGGTGGTCAACGGCACCGACAGCACCAGCGCGAT ACCGCCCACCGCGGACCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MSDLGSHPAASASLKDFCIDATSPVPVAKFWAAAIGGEVDVDDAGEAFIRRGKAVDIWVNRVPEAKGVKNRVHFDVYTRA VADLVALGATLLEEHEPDRVVMADIEGNEFCVFLDPNLESDTPARLFALCTDSDKPAEIARWWHDRVGGTLAPGPDGTLR WLREAAGWGDLIWKFVRVADARVVKNRWHWDVHGDAAELVREGARALRGPDTDIRWTVLIDPDGNEFCAFG
Sequences:
>Translated_231_residues MSDLGSHPAASASLKDFCIDATSPVPVAKFWAAAIGGEVDVDDAGEAFIRRGKAVDIWVNRVPEAKGVKNRVHFDVYTRA VADLVALGATLLEEHEPDRVVMADIEGNEFCVFLDPNLESDTPARLFALCTDSDKPAEIARWWHDRVGGTLAPGPDGTLR WLREAAGWGDLIWKFVRVADARVVKNRWHWDVHGDAAELVREGARALRGPDTDIRWTVLIDPDGNEFCAFG >Mature_230_residues SDLGSHPAASASLKDFCIDATSPVPVAKFWAAAIGGEVDVDDAGEAFIRRGKAVDIWVNRVPEAKGVKNRVHFDVYTRAV ADLVALGATLLEEHEPDRVVMADIEGNEFCVFLDPNLESDTPARLFALCTDSDKPAEIARWWHDRVGGTLAPGPDGTLRW LREAAGWGDLIWKFVRVADARVVKNRWHWDVHGDAAELVREGARALRGPDTDIRWTVLIDPDGNEFCAFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25414; Mature: 25282
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLGSHPAASASLKDFCIDATSPVPVAKFWAAAIGGEVDVDDAGEAFIRRGKAVDIWVN CCCCCCCCCCCCCHHHHEECCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHCCCEEEEEEE RVPEAKGVKNRVHFDVYTRAVADLVALGATLLEEHEPDRVVMADIEGNEFCVFLDPNLES CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEECCCCCC DTPARLFALCTDSDKPAEIARWWHDRVGGTLAPGPDGTLRWLREAAGWGDLIWKFVRVAD CCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHH ARVVKNRWHWDVHGDAAELVREGARALRGPDTDIRWTVLIDPDGNEFCAFG HHHHHCCCCEEECCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEECCC >Mature Secondary Structure SDLGSHPAASASLKDFCIDATSPVPVAKFWAAAIGGEVDVDDAGEAFIRRGKAVDIWVN CCCCCCCCCCCCHHHHEECCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHCCCEEEEEEE RVPEAKGVKNRVHFDVYTRAVADLVALGATLLEEHEPDRVVMADIEGNEFCVFLDPNLES CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEECCCCCC DTPARLFALCTDSDKPAEIARWWHDRVGGTLAPGPDGTLRWLREAAGWGDLIWKFVRVAD CCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHH ARVVKNRWHWDVHGDAAELVREGARALRGPDTDIRWTVLIDPDGNEFCAFG HHHHHCCCCEEECCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA