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The map label for this gene is fdhD [H]

Identifier: 169628682

GI number: 169628682

Start: 1619549

End: 1620370

Strand: Reverse

Name: fdhD [H]

Synonym: MAB_1592c

Alternate gene names: 169628682

Gene position: 1620370-1619549 (Counterclockwise)

Preceding gene: 169628683

Following gene: 169628680

Centisome position: 31.98

GC content: 66.18

Gene sequence:

>822_bases
GTGGGTAGGGTCACCGACAGGCGCAAGGTCCGGCGCATCGAGGGCGTGGGGCGTGGCGACCGCAGCGAGACACTCGTGGT
CGAGGAACCCCTGGAAATTCGGGTGAACGGGCAGGCGGTGGCCGTCACCATGCGCACTCCCGGCTCCGATGTCGAACTCA
CTCAAGGCTTCCTGCTCACCGAGGGGGTCATTGCCAGCCGCGACGACCTGCTCACCGTGCGGTACTGCCAGGGCGAGGGA
CCCGATGGCCTGAACACCTACAACGTTCTGGACGTCGCTCTCGCCCCGGGCGTGGCCGCGCCGGACCCCACGGTGACGCG
GAACTTCTACACCACGTCCTCGTGCGGTGTGTGCGGCAAGGGTTCGCTGGACGCGGTGCGAACCATCAGCCGTTTCTCCC
CCGGTGACGACCCGTCCACCATCGGATCGAACACGCTGGCCGGCCTGCCGGACAAACTTCGCTCGAGACAAAAGGTTTTC
GCGACGACCGGCGGGCTACATGCGGCCGCGCTGTTCACCCTGGATGGGACCGTGCTGGCGGTGCGCGAGGACATCGGCCG
GCACAACGCGGTGGACAAGGTCATCGGGTGGGCACTCGAAAACGACAAGGTGCCACTGACCGGGACTGTGCTGCTGGTGA
GTGGGCGCGCCTCCTTCGAACTCGCCCAGAAGGCAACCATGGCAGGCATTCCCATTCTGGCCGCGGTGTCGGCGCCCTCG
TCCCTGGCTGTGGATCTCGCGGCACAATCGGGGATGACGCTGGTGGCATTCCTGCGAGAGGACAGCATGAACATCTACAC
CCGAGCGGATCGAGTCAGCTAG

Upstream 100 bases:

>100_bases
GCGTATTATCCGGAAACCAATCCGCTTGTCCCCCTTGATCATGTCGCGGAAAGATCCAACACTCCGGTGTCCAAGGCCGT
CGTGATCCGATTGGTCGCCC

Downstream 100 bases:

>100_bases
CCGCCGGCACGTCGACAGCGATTTCCCTGCTCAATGAATAACCGGGCGCCAACGGCAGATTGTCACCGCTCCAGAACGAT
CCCGGATCGAAGTAGTTCGA

Product: formate dehydrogenase accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MGRVTDRRKVRRIEGVGRGDRSETLVVEEPLEIRVNGQAVAVTMRTPGSDVELTQGFLLTEGVIASRDDLLTVRYCQGEG
PDGLNTYNVLDVALAPGVAAPDPTVTRNFYTTSSCGVCGKGSLDAVRTISRFSPGDDPSTIGSNTLAGLPDKLRSRQKVF
ATTGGLHAAALFTLDGTVLAVREDIGRHNAVDKVIGWALENDKVPLTGTVLLVSGRASFELAQKATMAGIPILAAVSAPS
SLAVDLAAQSGMTLVAFLREDSMNIYTRADRVS

Sequences:

>Translated_273_residues
MGRVTDRRKVRRIEGVGRGDRSETLVVEEPLEIRVNGQAVAVTMRTPGSDVELTQGFLLTEGVIASRDDLLTVRYCQGEG
PDGLNTYNVLDVALAPGVAAPDPTVTRNFYTTSSCGVCGKGSLDAVRTISRFSPGDDPSTIGSNTLAGLPDKLRSRQKVF
ATTGGLHAAALFTLDGTVLAVREDIGRHNAVDKVIGWALENDKVPLTGTVLLVSGRASFELAQKATMAGIPILAAVSAPS
SLAVDLAAQSGMTLVAFLREDSMNIYTRADRVS
>Mature_272_residues
GRVTDRRKVRRIEGVGRGDRSETLVVEEPLEIRVNGQAVAVTMRTPGSDVELTQGFLLTEGVIASRDDLLTVRYCQGEGP
DGLNTYNVLDVALAPGVAAPDPTVTRNFYTTSSCGVCGKGSLDAVRTISRFSPGDDPSTIGSNTLAGLPDKLRSRQKVFA
TTGGLHAAALFTLDGTVLAVREDIGRHNAVDKVIGWALENDKVPLTGTVLLVSGRASFELAQKATMAGIPILAAVSAPSS
LAVDLAAQSGMTLVAFLREDSMNIYTRADRVS

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=276, Percent_Identity=32.9710144927536, Blast_Score=107, Evalue=6e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 28830; Mature: 28699

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: PS00626 RCC1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRVTDRRKVRRIEGVGRGDRSETLVVEEPLEIRVNGQAVAVTMRTPGSDVELTQGFLLT
CCCCCHHHHHHHHHCCCCCCCCCEEEEECCEEEEECCEEEEEEEECCCCCCEECCCEEEE
EGVIASRDDLLTVRYCQGEGPDGLNTYNVLDVALAPGVAAPDPTVTRNFYTTSSCGVCGK
CCEEECCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCC
GSLDAVRTISRFSPGDDPSTIGSNTLAGLPDKLRSRQKVFATTGGLHAAALFTLDGTVLA
CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEECCCCEEEEEEEECCEEEE
VREDIGRHNAVDKVIGWALENDKVPLTGTVLLVSGRASFELAQKATMAGIPILAAVSAPS
EEHHCCCCHHHHHHHHHEECCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCEEEEECCCC
SLAVDLAAQSGMTLVAFLREDSMNIYTRADRVS
CEEEEEHHCCCCEEEEEEECCCCEEEEECCCCC
>Mature Secondary Structure 
GRVTDRRKVRRIEGVGRGDRSETLVVEEPLEIRVNGQAVAVTMRTPGSDVELTQGFLLT
CCCCHHHHHHHHHCCCCCCCCCEEEEECCEEEEECCEEEEEEEECCCCCCEECCCEEEE
EGVIASRDDLLTVRYCQGEGPDGLNTYNVLDVALAPGVAAPDPTVTRNFYTTSSCGVCGK
CCEEECCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCC
GSLDAVRTISRFSPGDDPSTIGSNTLAGLPDKLRSRQKVFATTGGLHAAALFTLDGTVLA
CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEECCCCEEEEEEEECCEEEE
VREDIGRHNAVDKVIGWALENDKVPLTGTVLLVSGRASFELAQKATMAGIPILAAVSAPS
EEHHCCCCHHHHHHHHHEECCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCEEEEECCCC
SLAVDLAAQSGMTLVAFLREDSMNIYTRADRVS
CEEEEEHHCCCCEEEEEEECCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]