| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is mmpL1 [H]
Identifier: 169628611
GI number: 169628611
Start: 1538701
End: 1541604
Strand: Reverse
Name: mmpL1 [H]
Synonym: MAB_1520c
Alternate gene names: 169628611
Gene position: 1541604-1538701 (Counterclockwise)
Preceding gene: 169628614
Following gene: 169628608
Centisome position: 30.42
GC content: 65.36
Gene sequence:
>2904_bases ATGTGGGACGCCATCGCAAGGTTCTCCAGCCGCTATGCGGTGCTGATCATCGGACTCTGGGTGCTACTCGCCGGCGCAGG CAATCTACTTGTGCCACAGGTGGAAAGCACCGCACATAACCACGCCCGCGGCTTCCTGCCGCAGGACGCGCCGGTCAATG CTGCCGGCGCGGTCATGGGCCGGCAGTTCCAGGACGGCGCCGGTAACAATCTCAATTACCTGGTGTTGGAAAGCGATCAC AAGCTCGGCCCGGTCGAGCACCAATATCACGACCGGTTGCTGACCACATTGCGTGCCGATACCACCCATCTGGACTCCGC GATGGACCTGTGGGCCGACCCGTTGACCGCGGAGGGCGCGCTGAGCCCGGACGGCAAGGCGGTCTACACGATGCTCCGGG TCAACGGCGAGCTCGGCGCCGCCAAGGCGAACGACGCACTGGCTGCCGTCCGCAAGATCGTCGCCGACCAGCCCGCCCCT CCCGGGACGCAGGCCTGGGTCACCGGGCCGGGCGCGACCATCGCCGACGAACTGACCGCCATCGACACCCAGATGTTGAT GATCACCGGTGTCACCGTGGTGCTTATCGCGGTGCTGTTGTTTGTCGTGTACCGGTCCGTCATTACCGCCGCGATTCCGT TGATGACCGTAGGCCTGGGGCTGGCGGTGGCACGCTCGATCGTCGCGTTCCTGGGGGAACGCGATCTCATCGAGGTCTCC ATCTTCTCGGTATCACTGCTCGCCGCGCTGGTTCTCGGCGCGGCTACCGACTACGGAATCTTCTTGCTGGGCCGCTATCA CGAACAGCGACGCTCGGGAGTGGACCACGAGCAGGCACTGGTCATCGCCAACCGGTCGGTGGCACCGGTCATCGCGGCCT CCGGACTGACGATCGCGGCCGCCCTATCCTGCCTGCTCTTTGCGCAGGTCGGCATGCTGCGCAGCGCCGGATTACCCTGT GCCATTGGAATACTCACCGGCATGGTGGCCTCGTTGACGCTACTCCCCGCACTCATCGGGCTGGCAGGTCGCCGCGGCCT GGCCCAACCACGGCCGTTACGCGGGCAACCGGGACGCCGTTGGCGCCGAGTGGGTGCCATGGTGTCGCGCTGGCCGGGAC CTGTTTTGGCCGGATCATTACTGGTCCTGGTCGTCTGCGCCCTGCCGGTGGCGGGCCTGCGATTGGGTTTCGATGAGCTT GCCGCGCAACCGCTTTCCACTCACGCGAACCGCGGTTATCAGGCCATGGACCGGCACTTCCCGCCGAACCGGCTGTTGCC GGAGATTGTATCGATCGAATCCGACCACGATCTGCGAACTCCCGCCGGTGTCATCGCCGTCGAGCGAGTCACCAAGGGCC TCATGGAAATCCCCGGAATTCGGATGGTGCAGTCCGCTTCCCGCCCCGCGGGTACCATCCCCGAACAAGCCGCCCTGACC GAACAAGCCGGGATCATCGCCGACCAGTTGGATGACGGAACCGCCCAAATGAGCCAGCGACTGGGAGCCGTCGACAAGCT GTCGGCAACACTGAGCCAGTTCTCGGGCGCGATCGCCCAACTACAAAAGGGCCTGGCCGGTGGCGTGAACGGGCTGGGGG AACTCAACGGCGGCATCGGCGACATGCACTCGGGCATGAAGGCGCTGCAGGACAACGTGTCCCAGGTATCCGGGTACATG GAACCATTGCGCAACTTCACCAACGGCAATCCCAACTGCGCCAATGACGGCATCTGCTCCCTGGTGCTCAAGGCCGTCGA GCCCATGGACTCCGTGGTAGCGGCGACCGCGTCACTGACTGCCAGCACCACCAAATTCGGCGCGGGCGCCCAAGGCATGC AGAAGTCATTCTCCGGGGCGGTGGATTCGGTCAAGAACATGCGCGCCACCGTCGCGCAGCTCGGCGCCATCACCGATCAG CTCACCCACGCTGTCGGAGAGACACGCACCATGTTCTCCGGGCTCACCGAATACCTGCGGGCCATGCGGGAGGATTTCCG CAGCAGCGGTGAGGGCGGCTACTACCTCCCGCAACGCGCGTGGCAGGACCCGCGATTCCAGCGCGCGGCCGGCCTCTACT TCGGCCCGGACGGGCACTCCACCCGCATGCTGGTGTTCGGGGACGGCAAGGTGTTCGGCGCCGACGGGGCACATCGCTCG CCACAGATCATGCTCGCGGTGAGCGAGGCCACCAAAGAGGGGACACTGGCGGGCAGTTCGGTCAATCTCACCGGGTTCGG AACGGGTACAGCCGAATTGCGTGGATACGTCAGCGAGGACTTCCTGCTGTTGGCCGCCGTGGCGCTGGCGTTGGTCTTCC TCATCGTGCTGGTCATGTTGCGCAGCCCGGTCGCCGCCGCGGTGGTGATCGGGACAGTAATCATCTCGTACGCGTCAGCG CTCGGCGTCACGACACTGATCTGGCAGGACCTACTCGGCCGCGACCTGCATTGGGCCGTACCGTCCATTGCGCTGATCGC ACTCGTCGCCGTCGGAGCCGACTACAACCTGCTACTCACCATGCGGATGCGCGAGGAGGTGTTCCTACACGGAGCGGGCT TGCGTACCGGCATGATCCGCACGTTCGGTGGCACGGGCGGGGTCGTCACCACGGCCGGAATCGTCTTCGGAATCACCATG TTCGCCATGCTGTCCAGTGACGTACTCAGCATTGAGCAGACCGGCACGACGATCGGCGTGGGCCTGATGATCGACACACT CATCGTCAGAACCTTCGTGGTGCCCGCGATCGCGGGCGCGTTGGGCAAGTGGTTCTGGTGGTCGCCCGTGCCGCTACTGC GCGGGCTGCTGTTCCGGTGGTCCAAGGCGCGCTCGCCCCGAACAGCCGGGGTGCTGTCCTACCTATTGACCAGGCCGTCG CGACTGGAGCGAACCGGCGCCTAG
Upstream 100 bases:
>100_bases TCATCCTTGGCGTGGATACACATGTCATACCACGGTCGGAGAACATGTCTCGCCCGCAGCACGACGCGGCCGCCCCGGCA TGTCCGTAGCGTCGGCAGGC
Downstream 100 bases:
>100_bases CCTTCCGGCTCGGAGTCTCGGTCCAAGAGGCTGCGCGGGAACGCCAGGATGCCGGCGACCGACAACAGCCATGCCACCAG GCGCGCCACACCAATTCCGA
Product: MmpL family membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 967; Mature: 967
Protein sequence:
>967_residues MWDAIARFSSRYAVLIIGLWVLLAGAGNLLVPQVESTAHNHARGFLPQDAPVNAAGAVMGRQFQDGAGNNLNYLVLESDH KLGPVEHQYHDRLLTTLRADTTHLDSAMDLWADPLTAEGALSPDGKAVYTMLRVNGELGAAKANDALAAVRKIVADQPAP PGTQAWVTGPGATIADELTAIDTQMLMITGVTVVLIAVLLFVVYRSVITAAIPLMTVGLGLAVARSIVAFLGERDLIEVS IFSVSLLAALVLGAATDYGIFLLGRYHEQRRSGVDHEQALVIANRSVAPVIAASGLTIAAALSCLLFAQVGMLRSAGLPC AIGILTGMVASLTLLPALIGLAGRRGLAQPRPLRGQPGRRWRRVGAMVSRWPGPVLAGSLLVLVVCALPVAGLRLGFDEL AAQPLSTHANRGYQAMDRHFPPNRLLPEIVSIESDHDLRTPAGVIAVERVTKGLMEIPGIRMVQSASRPAGTIPEQAALT EQAGIIADQLDDGTAQMSQRLGAVDKLSATLSQFSGAIAQLQKGLAGGVNGLGELNGGIGDMHSGMKALQDNVSQVSGYM EPLRNFTNGNPNCANDGICSLVLKAVEPMDSVVAATASLTASTTKFGAGAQGMQKSFSGAVDSVKNMRATVAQLGAITDQ LTHAVGETRTMFSGLTEYLRAMREDFRSSGEGGYYLPQRAWQDPRFQRAAGLYFGPDGHSTRMLVFGDGKVFGADGAHRS PQIMLAVSEATKEGTLAGSSVNLTGFGTGTAELRGYVSEDFLLLAAVALALVFLIVLVMLRSPVAAAVVIGTVIISYASA LGVTTLIWQDLLGRDLHWAVPSIALIALVAVGADYNLLLTMRMREEVFLHGAGLRTGMIRTFGGTGGVVTTAGIVFGITM FAMLSSDVLSIEQTGTTIGVGLMIDTLIVRTFVVPAIAGALGKWFWWSPVPLLRGLLFRWSKARSPRTAGVLSYLLTRPS RLERTGA
Sequences:
>Translated_967_residues MWDAIARFSSRYAVLIIGLWVLLAGAGNLLVPQVESTAHNHARGFLPQDAPVNAAGAVMGRQFQDGAGNNLNYLVLESDH KLGPVEHQYHDRLLTTLRADTTHLDSAMDLWADPLTAEGALSPDGKAVYTMLRVNGELGAAKANDALAAVRKIVADQPAP PGTQAWVTGPGATIADELTAIDTQMLMITGVTVVLIAVLLFVVYRSVITAAIPLMTVGLGLAVARSIVAFLGERDLIEVS IFSVSLLAALVLGAATDYGIFLLGRYHEQRRSGVDHEQALVIANRSVAPVIAASGLTIAAALSCLLFAQVGMLRSAGLPC AIGILTGMVASLTLLPALIGLAGRRGLAQPRPLRGQPGRRWRRVGAMVSRWPGPVLAGSLLVLVVCALPVAGLRLGFDEL AAQPLSTHANRGYQAMDRHFPPNRLLPEIVSIESDHDLRTPAGVIAVERVTKGLMEIPGIRMVQSASRPAGTIPEQAALT EQAGIIADQLDDGTAQMSQRLGAVDKLSATLSQFSGAIAQLQKGLAGGVNGLGELNGGIGDMHSGMKALQDNVSQVSGYM EPLRNFTNGNPNCANDGICSLVLKAVEPMDSVVAATASLTASTTKFGAGAQGMQKSFSGAVDSVKNMRATVAQLGAITDQ LTHAVGETRTMFSGLTEYLRAMREDFRSSGEGGYYLPQRAWQDPRFQRAAGLYFGPDGHSTRMLVFGDGKVFGADGAHRS PQIMLAVSEATKEGTLAGSSVNLTGFGTGTAELRGYVSEDFLLLAAVALALVFLIVLVMLRSPVAAAVVIGTVIISYASA LGVTTLIWQDLLGRDLHWAVPSIALIALVAVGADYNLLLTMRMREEVFLHGAGLRTGMIRTFGGTGGVVTTAGIVFGITM FAMLSSDVLSIEQTGTTIGVGLMIDTLIVRTFVVPAIAGALGKWFWWSPVPLLRGLLFRWSKARSPRTAGVLSYLLTRPS RLERTGA >Mature_967_residues MWDAIARFSSRYAVLIIGLWVLLAGAGNLLVPQVESTAHNHARGFLPQDAPVNAAGAVMGRQFQDGAGNNLNYLVLESDH KLGPVEHQYHDRLLTTLRADTTHLDSAMDLWADPLTAEGALSPDGKAVYTMLRVNGELGAAKANDALAAVRKIVADQPAP PGTQAWVTGPGATIADELTAIDTQMLMITGVTVVLIAVLLFVVYRSVITAAIPLMTVGLGLAVARSIVAFLGERDLIEVS IFSVSLLAALVLGAATDYGIFLLGRYHEQRRSGVDHEQALVIANRSVAPVIAASGLTIAAALSCLLFAQVGMLRSAGLPC AIGILTGMVASLTLLPALIGLAGRRGLAQPRPLRGQPGRRWRRVGAMVSRWPGPVLAGSLLVLVVCALPVAGLRLGFDEL AAQPLSTHANRGYQAMDRHFPPNRLLPEIVSIESDHDLRTPAGVIAVERVTKGLMEIPGIRMVQSASRPAGTIPEQAALT EQAGIIADQLDDGTAQMSQRLGAVDKLSATLSQFSGAIAQLQKGLAGGVNGLGELNGGIGDMHSGMKALQDNVSQVSGYM EPLRNFTNGNPNCANDGICSLVLKAVEPMDSVVAATASLTASTTKFGAGAQGMQKSFSGAVDSVKNMRATVAQLGAITDQ LTHAVGETRTMFSGLTEYLRAMREDFRSSGEGGYYLPQRAWQDPRFQRAAGLYFGPDGHSTRMLVFGDGKVFGADGAHRS PQIMLAVSEATKEGTLAGSSVNLTGFGTGTAELRGYVSEDFLLLAAVALALVFLIVLVMLRSPVAAAVVIGTVIISYASA LGVTTLIWQDLLGRDLHWAVPSIALIALVAVGADYNLLLTMRMREEVFLHGAGLRTGMIRTFGGTGGVVTTAGIVFGITM FAMLSSDVLSIEQTGTTIGVGLMIDTLIVRTFVVPAIAGALGKWFWWSPVPLLRGLLFRWSKARSPRTAGVLSYLLTRPS RLERTGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mmpL family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004707 - InterPro: IPR004869 [H]
Pfam domain/function: PF03176 MMPL [H]
EC number: NA
Molecular weight: Translated: 101964; Mature: 101964
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWDAIARFSSRYAVLIIGLWVLLAGAGNLLVPQVESTAHNHARGFLPQDAPVNAAGAVMG CCHHHHHHHCCHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHC RQFQDGAGNNLNYLVLESDHKLGPVEHQYHDRLLTTLRADTTHLDSAMDLWADPLTAEGA CCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCC LSPDGKAVYTMLRVNGELGAAKANDALAAVRKIVADQPAPPGTQAWVTGPGATIADELTA CCCCCHHEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHH IDTQMLMITGVTVVLIAVLLFVVYRSVITAAIPLMTVGLGLAVARSIVAFLGERDLIEVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHH IFSVSLLAALVLGAATDYGIFLLGRYHEQRRSGVDHEQALVIANRSVAPVIAASGLTIAA HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHEEEEECCCCCHHHHHCCHHHHH ALSCLLFAQVGMLRSAGLPCAIGILTGMVASLTLLPALIGLAGRRGLAQPRPLRGQPGRR HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH WRRVGAMVSRWPGPVLAGSLLVLVVCALPVAGLRLGFDELAAQPLSTHANRGYQAMDRHF HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHCCCHHHHHCCC PPNRLLPEIVSIESDHDLRTPAGVIAVERVTKGLMEIPGIRMVQSASRPAGTIPEQAALT CCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHH EQAGIIADQLDDGTAQMSQRLGAVDKLSATLSQFSGAIAQLQKGLAGGVNGLGELNGGIG HHHCCHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHH DMHSGMKALQDNVSQVSGYMEPLRNFTNGNPNCANDGICSLVLKAVEPMDSVVAATASLT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ASTTKFGAGAQGMQKSFSGAVDSVKNMRATVAQLGAITDQLTHAVGETRTMFSGLTEYLR HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMREDFRSSGEGGYYLPQRAWQDPRFQRAAGLYFGPDGHSTRMLVFGDGKVFGADGAHRS HHHHHHHCCCCCCEECCHHCCCCCCHHHHCCCEECCCCCCEEEEEEECCEEECCCCCCCC PQIMLAVSEATKEGTLAGSSVNLTGFGTGTAELRGYVSEDFLLLAAVALALVFLIVLVML CEEEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSPVAAAVVIGTVIISYASALGVTTLIWQDLLGRDLHWAVPSIALIALVAVGADYNLLLT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEE MRMREEVFLHGAGLRTGMIRTFGGTGGVVTTAGIVFGITMFAMLSSDVLSIEQTGTTIGV EEHHHHHHHCCCCCCCCHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHH GLMIDTLIVRTFVVPAIAGALGKWFWWSPVPLLRGLLFRWSKARSPRTAGVLSYLLTRPS HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCH RLERTGA HHHCCCC >Mature Secondary Structure MWDAIARFSSRYAVLIIGLWVLLAGAGNLLVPQVESTAHNHARGFLPQDAPVNAAGAVMG CCHHHHHHHCCHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHC RQFQDGAGNNLNYLVLESDHKLGPVEHQYHDRLLTTLRADTTHLDSAMDLWADPLTAEGA CCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCC LSPDGKAVYTMLRVNGELGAAKANDALAAVRKIVADQPAPPGTQAWVTGPGATIADELTA CCCCCHHEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHH IDTQMLMITGVTVVLIAVLLFVVYRSVITAAIPLMTVGLGLAVARSIVAFLGERDLIEVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHH IFSVSLLAALVLGAATDYGIFLLGRYHEQRRSGVDHEQALVIANRSVAPVIAASGLTIAA HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHEEEEECCCCCHHHHHCCHHHHH ALSCLLFAQVGMLRSAGLPCAIGILTGMVASLTLLPALIGLAGRRGLAQPRPLRGQPGRR HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH WRRVGAMVSRWPGPVLAGSLLVLVVCALPVAGLRLGFDELAAQPLSTHANRGYQAMDRHF HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHCCCHHHHHCCC PPNRLLPEIVSIESDHDLRTPAGVIAVERVTKGLMEIPGIRMVQSASRPAGTIPEQAALT CCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHH EQAGIIADQLDDGTAQMSQRLGAVDKLSATLSQFSGAIAQLQKGLAGGVNGLGELNGGIG HHHCCHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHH DMHSGMKALQDNVSQVSGYMEPLRNFTNGNPNCANDGICSLVLKAVEPMDSVVAATASLT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ASTTKFGAGAQGMQKSFSGAVDSVKNMRATVAQLGAITDQLTHAVGETRTMFSGLTEYLR HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMREDFRSSGEGGYYLPQRAWQDPRFQRAAGLYFGPDGHSTRMLVFGDGKVFGADGAHRS HHHHHHHCCCCCCEECCHHCCCCCCHHHHCCCEECCCCCCEEEEEEECCEEECCCCCCCC PQIMLAVSEATKEGTLAGSSVNLTGFGTGTAELRGYVSEDFLLLAAVALALVFLIVLVML CEEEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSPVAAAVVIGTVIISYASALGVTTLIWQDLLGRDLHWAVPSIALIALVAVGADYNLLLT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEE MRMREEVFLHGAGLRTGMIRTFGGTGGVVTTAGIVFGITMFAMLSSDVLSIEQTGTTIGV EEHHHHHHHCCCCCCCCHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHH GLMIDTLIVRTFVVPAIAGALGKWFWWSPVPLLRGLLFRWSKARSPRTAGVLSYLLTRPS HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCH RLERTGA HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]