| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is murI [H]
Identifier: 169628573
GI number: 169628573
Start: 1493312
End: 1494160
Strand: Direct
Name: murI [H]
Synonym: MAB_1482
Alternate gene names: 169628573
Gene position: 1493312-1494160 (Clockwise)
Preceding gene: 169628572
Following gene: 169628574
Centisome position: 29.47
GC content: 64.55
Gene sequence:
>849_bases ATGAGCGACGCACCCATCGGAATTTTCGATTCCGGCGTCGGTGGCTTGACGGTGGCACGCGCCATCATCGATCAGCTGCC CGACGAGGACATCCTGTATGTCGGCGATACCGGCAATGGGCCGTACGGTCCGCTGACCATTCCGGAGATCCGCACGCACG CACTGACCATCGGGGACGATCTGGTAGGCCGTGGGGTGAAGGCCCTGGTGATCGCCTGCAATACGGCATCGGCGGCGTGC CTGCGCGATGCCCGCGAACGGTATGCGCCGGTGCCCGTCATCGAGGTGGTGCTGCCCGCCGTGCGACGAGCCGTACACAC CACGCACAACAACAAGATCGGTGTCATCGGCACCGAGGCGACCATCGCCTCGGGTGCGTACCAGGACGCATTCGCCGCCG CGCGCGACACCGAAATCACGGCGGTGGCATGTCCGCGATTCGTCGATTTTGTCGAGCGCGGCATTACCAGTGGGCGGCAG GTACTTCAGCTCGCTGAGGGCTATCTGGAGCCACTGCAACGAGCCCAGGTGGACACCGTGGTGTTGGGTTGTACCCATTA TCCGTTGTTGTCCGGGTTGATCCAGCTGGCCATGGGCGAGGACGTCACGCTCGTGTCCAGTGCGGAGGAAACCGCTAAGG ACCTGCTGCGGGTGCTGTCGGAGAAAGATCTGCTGCGGCCGCACCCCGAGCGCCCCGGCACCGCGTCTCCGAACCGCGTC TTCGAGGCAACCGGCGATCCGGAAGCGTTCCGCGCGCTGGCCGCCCGATTCCTCGGCCCGGCTGTGACAGCAGTGCAAAC TCGGGCTAGCAGTGTTCCCGGTTACACCGAAATTACCCGTTCCAGTTAG
Upstream 100 bases:
>100_bases GTGGCGCCGTGGCCGGCGTGCTGGCGGCCTACTGGCTATCCGGCAGGGAACGTAAGGTACAGGCCGCACGTGGGCCAGGG GTGCCGCCGAGGCTCACGCC
Downstream 100 bases:
>100_bases ACACCCCTGCGCCCCTGTGCAGAGACGCTTGCCAGGCGTGGCAAGCTAGGGCTGTGCGAGTCACCGTGCTCGGCTGCTCG GGCAGTGTCACCGGACCGGA
Product: glutamate racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MSDAPIGIFDSGVGGLTVARAIIDQLPDEDILYVGDTGNGPYGPLTIPEIRTHALTIGDDLVGRGVKALVIACNTASAAC LRDARERYAPVPVIEVVLPAVRRAVHTTHNNKIGVIGTEATIASGAYQDAFAAARDTEITAVACPRFVDFVERGITSGRQ VLQLAEGYLEPLQRAQVDTVVLGCTHYPLLSGLIQLAMGEDVTLVSSAEETAKDLLRVLSEKDLLRPHPERPGTASPNRV FEATGDPEAFRALAARFLGPAVTAVQTRASSVPGYTEITRSS
Sequences:
>Translated_282_residues MSDAPIGIFDSGVGGLTVARAIIDQLPDEDILYVGDTGNGPYGPLTIPEIRTHALTIGDDLVGRGVKALVIACNTASAAC LRDARERYAPVPVIEVVLPAVRRAVHTTHNNKIGVIGTEATIASGAYQDAFAAARDTEITAVACPRFVDFVERGITSGRQ VLQLAEGYLEPLQRAQVDTVVLGCTHYPLLSGLIQLAMGEDVTLVSSAEETAKDLLRVLSEKDLLRPHPERPGTASPNRV FEATGDPEAFRALAARFLGPAVTAVQTRASSVPGYTEITRSS >Mature_281_residues SDAPIGIFDSGVGGLTVARAIIDQLPDEDILYVGDTGNGPYGPLTIPEIRTHALTIGDDLVGRGVKALVIACNTASAACL RDARERYAPVPVIEVVLPAVRRAVHTTHNNKIGVIGTEATIASGAYQDAFAAARDTEITAVACPRFVDFVERGITSGRQV LQLAEGYLEPLQRAQVDTVVLGCTHYPLLSGLIQLAMGEDVTLVSSAEETAKDLLRVLSEKDLLRPHPERPGTASPNRVF EATGDPEAFRALAARFLGPAVTAVQTRASSVPGYTEITRSS
Specific function: Provides the (R)-glutamate required for cell wall biosynthesis [H]
COG id: COG0796
COG function: function code M; Glutamate racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate/glutamate racemases family [H]
Homologues:
Organism=Escherichia coli, GI87082355, Length=210, Percent_Identity=33.8095238095238, Blast_Score=84, Evalue=9e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015942 - InterPro: IPR001920 - InterPro: IPR018187 - InterPro: IPR004391 [H]
Pfam domain/function: PF01177 Asp_Glu_race [H]
EC number: =5.1.1.3 [H]
Molecular weight: Translated: 29854; Mature: 29723
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS00923 ASP_GLU_RACEMASE_1 ; PS00924 ASP_GLU_RACEMASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDAPIGIFDSGVGGLTVARAIIDQLPDEDILYVGDTGNGPYGPLTIPEIRTHALTIGDD CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHEEEECHH LVGRGVKALVIACNTASAACLRDARERYAPVPVIEVVLPAVRRAVHTTHNNKIGVIGTEA HHHCCCEEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCH TIASGAYQDAFAAARDTEITAVACPRFVDFVERGITSGRQVLQLAEGYLEPLQRAQVDTV HHHCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEE VLGCTHYPLLSGLIQLAMGEDVTLVSSAEETAKDLLRVLSEKDLLRPHPERPGTASPNRV EECCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCE FEATGDPEAFRALAARFLGPAVTAVQTRASSVPGYTEITRSS EECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCC >Mature Secondary Structure SDAPIGIFDSGVGGLTVARAIIDQLPDEDILYVGDTGNGPYGPLTIPEIRTHALTIGDD CCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHEEEECHH LVGRGVKALVIACNTASAACLRDARERYAPVPVIEVVLPAVRRAVHTTHNNKIGVIGTEA HHHCCCEEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCH TIASGAYQDAFAAARDTEITAVACPRFVDFVERGITSGRQVLQLAEGYLEPLQRAQVDTV HHHCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEE VLGCTHYPLLSGLIQLAMGEDVTLVSSAEETAKDLLRVLSEKDLLRPHPERPGTASPNRV EECCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCE FEATGDPEAFRALAARFLGPAVTAVQTRASSVPGYTEITRSS EECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA