Click here to switch to the map view.

The map label for this gene is glgE [H]

Identifier: 169628559

GI number: 169628559

Start: 1477977

End: 1480049

Strand: Reverse

Name: glgE [H]

Synonym: MAB_1468c

Alternate gene names: 169628559

Gene position: 1480049-1477977 (Counterclockwise)

Preceding gene: 169628561

Following gene: 169628558

Centisome position: 29.21

GC content: 66.38

Gene sequence:

>2073_bases
GTGACCGGACGCATAGGCATCGACGATGTCGCCCCCGTGATCGCGGGTGGACGCTATCCGGCCAAGGCCGTCGTCGGCGA
GGTTGTGCCGGTGGCGGCGACCGTCTGGCGGGAAGGCCATGACGCCGTCGCCGCAACCCTGGTGGTGCGATGCCTCGGAC
CCAGCTACCCCCAGCTCGCCGAGGGACCGCTGCGCCGCATATCGGCCCCTCGCGACAGGGACAAGAACGCGGCACGCATC
AAGCCGGTGCATATCCCGATGCAGCCGGGCGGGGCGCTCGACCGGTTTCACGCGAACTTCGTGCCGGACCGCGAGGGACT
GTGGACCTTCCGGGTCGACGGGTGGGGTGATCCGGTCGCTACCTGGCGCCACAACGTCGCCGCCAAGTTGGAAGCCGGCC
AGGGTGCCGCCGAATTGGCCAACGATCTGGAGATCGGTGCGCGATTGTTCGAGCGGGCCGCCACCGGCGTGCCACGCAAG
CGGCGCCAGCCACTGCTGGATTCCGCGGACGCACTGCGCACCGACAACGATCCGGGCGTACGTTTTCAGCACGCGCTGTC
CGTGGAGGCGCTCGGGCTGCTCGACGAATTCCCGCTGCGCGATTTGCTCACCCGGGGCACCCAGTACGGCATCTGGGTGG
ACCGCACCCGCGCACTGTACGGCGCGTGGTACGAGCTGTTCCCGCGTTCCACCGGTGGCGTCGGACCGGACGGACGCCCG
ATGCACGGCACCCTGGCGACCGCCGCCGCAGATCTGGCCCGCGTCGCTGCCATGGGATTCGACGTGGTGTACCTGCCGCC
GATTCATCCAATCGGCGAGGTAAACCGCAAGGGCCGCAACAATAATCCGATCTCCGAACCCGGCGAGGTGGGCTCACCGT
GGGCGATCGGCAGCGTCGCCGGTGGTCACGACGCCATCCATCCCGAGCTCGGCACCCTCAAGGACTTCGATCGGTTCATC
GCCACCGCACAGAAGCTGGGTCTGGAGGTTGCGCTGGACCTCGCATTGCAGTGCGCACCCGATCACCCGTGGGTGCGCGC
GCATCCCGAGTGGTTCACCGAGCTTCCCGACGGGACCATCGCCTACGCGGAGAACCCTCCGAAGAAGTACCAGGACATCT
ACCCGCTGAACTTCGACACAGATCCGGCGGGCCTCTACACCGAGGTACTGCGGGTGGTTCAGCACTGGATTTCCCACGGC
GTCAAGATATTCCGGGTGGACAACCCTCATACCAAGCCACCCGACTTCTGGCAGTGGCTGATCGGCGAGGTCAAAGCCGC
CGACCCCGACGTCCTCTTCCTCTCGGAGGCCTTCACACGCCCGGCCCGGCTCTACGGGCTGGCGCGGCTTGGCTTCACCC
AGTCGTATACCTACTTCACCTGGCGCACCGGAAAATCCGAGATCGCCGACTTCGGACGGGAAATCGCCGCACAGGCCGAC
CAGGCGCGCCCGAATCTCTTCGTAAACACCCCGGACATCCTGCACGCCAGCTTGCAGCACGGCGGTCCGGGCATGTTCGC
CATCCGCGCGGTCCTGGCCGGCACCCTGAGCCCCACCTGGGGCGTGTACTCCGGATACGAACTCTACGAACATGTTCCCC
TGCGTGACGGCAGCGAGGAATACCTCGACTCGGAGAAGTATCAGCTGCGGCCTCGTGACTACAAGGGGGCCGCGGCGCGT
GGCGAGTCATTGGAGCCGTTCATCACCCGGCTCAACGAGATCCGGCGATTGCACCCCGCTCTGCACCAGCTGCGCAACAT
CACCTTCCACCATGTCGAGAATGACGCGCTGCTCGCGTACTCCAAGTTCGATCCGGTCACCGGTGACGCGGTTCTGGTCG
TCGTGAACCTCAACCCGTTCGGCCCCGAGGACGGCACCCTCTGGGTTGACCTGCCCGCGCTCGGCCTCGACTGGCACGAG
ACCTTTTGGGTACGTGATGAGCTCACCGGTGAGCAATACCGCTGGGGCCAAGCCAACTACGTGCGGCTCGATCCGCCCAA
GGCCGTAGCGCACATCCTCAACCTGCCGCAGGTTCGCGAACCCGTACGAACGCAGCTGGTGTACCGCCCGTGA

Upstream 100 bases:

>100_bases
TTCCGTATCGCACGTTTCCGCCACGGGCGGGCGTGTCGCCGAGGGTTCGGTAGCCGCTGCTATCCCGCGCGGCAGGGGCC
CGTCTACTACGGTGGACGTG

Downstream 100 bases:

>100_bases
GCCCATCGACCGCCCCTTTGCAACCGGATGCCGCGGACATCGCGCGGCTGCTGGCAGGCACCCACCACAACCCTCATTCA
ATCCTGGGCGCGCACGAGTA

Product: putative glucanase GlgE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 690; Mature: 689

Protein sequence:

>690_residues
MTGRIGIDDVAPVIAGGRYPAKAVVGEVVPVAATVWREGHDAVAATLVVRCLGPSYPQLAEGPLRRISAPRDRDKNAARI
KPVHIPMQPGGALDRFHANFVPDREGLWTFRVDGWGDPVATWRHNVAAKLEAGQGAAELANDLEIGARLFERAATGVPRK
RRQPLLDSADALRTDNDPGVRFQHALSVEALGLLDEFPLRDLLTRGTQYGIWVDRTRALYGAWYELFPRSTGGVGPDGRP
MHGTLATAAADLARVAAMGFDVVYLPPIHPIGEVNRKGRNNNPISEPGEVGSPWAIGSVAGGHDAIHPELGTLKDFDRFI
ATAQKLGLEVALDLALQCAPDHPWVRAHPEWFTELPDGTIAYAENPPKKYQDIYPLNFDTDPAGLYTEVLRVVQHWISHG
VKIFRVDNPHTKPPDFWQWLIGEVKAADPDVLFLSEAFTRPARLYGLARLGFTQSYTYFTWRTGKSEIADFGREIAAQAD
QARPNLFVNTPDILHASLQHGGPGMFAIRAVLAGTLSPTWGVYSGYELYEHVPLRDGSEEYLDSEKYQLRPRDYKGAAAR
GESLEPFITRLNEIRRLHPALHQLRNITFHHVENDALLAYSKFDPVTGDAVLVVVNLNPFGPEDGTLWVDLPALGLDWHE
TFWVRDELTGEQYRWGQANYVRLDPPKAVAHILNLPQVREPVRTQLVYRP

Sequences:

>Translated_690_residues
MTGRIGIDDVAPVIAGGRYPAKAVVGEVVPVAATVWREGHDAVAATLVVRCLGPSYPQLAEGPLRRISAPRDRDKNAARI
KPVHIPMQPGGALDRFHANFVPDREGLWTFRVDGWGDPVATWRHNVAAKLEAGQGAAELANDLEIGARLFERAATGVPRK
RRQPLLDSADALRTDNDPGVRFQHALSVEALGLLDEFPLRDLLTRGTQYGIWVDRTRALYGAWYELFPRSTGGVGPDGRP
MHGTLATAAADLARVAAMGFDVVYLPPIHPIGEVNRKGRNNNPISEPGEVGSPWAIGSVAGGHDAIHPELGTLKDFDRFI
ATAQKLGLEVALDLALQCAPDHPWVRAHPEWFTELPDGTIAYAENPPKKYQDIYPLNFDTDPAGLYTEVLRVVQHWISHG
VKIFRVDNPHTKPPDFWQWLIGEVKAADPDVLFLSEAFTRPARLYGLARLGFTQSYTYFTWRTGKSEIADFGREIAAQAD
QARPNLFVNTPDILHASLQHGGPGMFAIRAVLAGTLSPTWGVYSGYELYEHVPLRDGSEEYLDSEKYQLRPRDYKGAAAR
GESLEPFITRLNEIRRLHPALHQLRNITFHHVENDALLAYSKFDPVTGDAVLVVVNLNPFGPEDGTLWVDLPALGLDWHE
TFWVRDELTGEQYRWGQANYVRLDPPKAVAHILNLPQVREPVRTQLVYRP
>Mature_689_residues
TGRIGIDDVAPVIAGGRYPAKAVVGEVVPVAATVWREGHDAVAATLVVRCLGPSYPQLAEGPLRRISAPRDRDKNAARIK
PVHIPMQPGGALDRFHANFVPDREGLWTFRVDGWGDPVATWRHNVAAKLEAGQGAAELANDLEIGARLFERAATGVPRKR
RQPLLDSADALRTDNDPGVRFQHALSVEALGLLDEFPLRDLLTRGTQYGIWVDRTRALYGAWYELFPRSTGGVGPDGRPM
HGTLATAAADLARVAAMGFDVVYLPPIHPIGEVNRKGRNNNPISEPGEVGSPWAIGSVAGGHDAIHPELGTLKDFDRFIA
TAQKLGLEVALDLALQCAPDHPWVRAHPEWFTELPDGTIAYAENPPKKYQDIYPLNFDTDPAGLYTEVLRVVQHWISHGV
KIFRVDNPHTKPPDFWQWLIGEVKAADPDVLFLSEAFTRPARLYGLARLGFTQSYTYFTWRTGKSEIADFGREIAAQADQ
ARPNLFVNTPDILHASLQHGGPGMFAIRAVLAGTLSPTWGVYSGYELYEHVPLRDGSEEYLDSEKYQLRPRDYKGAAARG
ESLEPFITRLNEIRRLHPALHQLRNITFHHVENDALLAYSKFDPVTGDAVLVVVNLNPFGPEDGTLWVDLPALGLDWHET
FWVRDELTGEQYRWGQANYVRLDPPKAVAHILNLPQVREPVRTQLVYRP

Specific function: Could be involved in glycogen catabolism [H]

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family. GlgE subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021828
- InterPro:   IPR013780
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF11896 DUF3416 [H]

EC number: NA

Molecular weight: Translated: 76613; Mature: 76482

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGRIGIDDVAPVIAGGRYPAKAVVGEVVPVAATVWREGHDAVAATLVVRCLGPSYPQLA
CCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHH
EGPLRRISAPRDRDKNAARIKPVHIPMQPGGALDRFHANFVPDREGLWTFRVDGWGDPVA
HCHHHHCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHCCCCCCCCCEEEEEECCCCCCHH
TWRHNVAAKLEAGQGAAELANDLEIGARLFERAATGVPRKRRQPLLDSADALRTDNDPGV
HHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHCCCCCCCC
RFQHALSVEALGLLDEFPLRDLLTRGTQYGIWVDRTRALYGAWYELFPRSTGGVGPDGRP
EEEHECCHHHHHHHHHCCHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCC
MHGTLATAAADLARVAAMGFDVVYLPPIHPIGEVNRKGRNNNPISEPGEVGSPWAIGSVA
CCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCEEECCCC
GGHDAIHPELGTLKDFDRFIATAQKLGLEVALDLALQCAPDHPWVRAHPEWFTELPDGTI
CCCCCCCCCCCCHHHHHHHHHHHHHHCHHHEEEEHEEECCCCCCEECCCHHHHHCCCCEE
AYAENPPKKYQDIYPLNFDTDPAGLYTEVLRVVQHWISHGVKIFRVDNPHTKPPDFWQWL
EECCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHH
IGEVKAADPDVLFLSEAFTRPARLYGLARLGFTQSYTYFTWRTGKSEIADFGREIAAQAD
HHHHCCCCCCEEEEHHHHCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHH
QARPNLFVNTPDILHASLQHGGPGMFAIRAVLAGTLSPTWGVYSGYELYEHVPLRDGSEE
HCCCCEEECCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCHH
YLDSEKYQLRPRDYKGAAARGESLEPFITRLNEIRRLHPALHQLRNITFHHVENDALLAY
HHCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEE
SKFDPVTGDAVLVVVNLNPFGPEDGTLWVDLPALGLDWHETFWVRDELTGEQYRWGQANY
ECCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCHHHEEEEECCCCCCCEECCCCCE
VRLDPPKAVAHILNLPQVREPVRTQLVYRP
EEECCHHHHHHHHCCHHHHHHHHHCEECCC
>Mature Secondary Structure 
TGRIGIDDVAPVIAGGRYPAKAVVGEVVPVAATVWREGHDAVAATLVVRCLGPSYPQLA
CCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHH
EGPLRRISAPRDRDKNAARIKPVHIPMQPGGALDRFHANFVPDREGLWTFRVDGWGDPVA
HCHHHHCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHCCCCCCCCCEEEEEECCCCCCHH
TWRHNVAAKLEAGQGAAELANDLEIGARLFERAATGVPRKRRQPLLDSADALRTDNDPGV
HHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHCCCCCCCC
RFQHALSVEALGLLDEFPLRDLLTRGTQYGIWVDRTRALYGAWYELFPRSTGGVGPDGRP
EEEHECCHHHHHHHHHCCHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCC
MHGTLATAAADLARVAAMGFDVVYLPPIHPIGEVNRKGRNNNPISEPGEVGSPWAIGSVA
CCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCEEECCCC
GGHDAIHPELGTLKDFDRFIATAQKLGLEVALDLALQCAPDHPWVRAHPEWFTELPDGTI
CCCCCCCCCCCCHHHHHHHHHHHHHHCHHHEEEEHEEECCCCCCEECCCHHHHHCCCCEE
AYAENPPKKYQDIYPLNFDTDPAGLYTEVLRVVQHWISHGVKIFRVDNPHTKPPDFWQWL
EECCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHH
IGEVKAADPDVLFLSEAFTRPARLYGLARLGFTQSYTYFTWRTGKSEIADFGREIAAQAD
HHHHCCCCCCEEEEHHHHCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHH
QARPNLFVNTPDILHASLQHGGPGMFAIRAVLAGTLSPTWGVYSGYELYEHVPLRDGSEE
HCCCCEEECCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCHH
YLDSEKYQLRPRDYKGAAARGESLEPFITRLNEIRRLHPALHQLRNITFHHVENDALLAY
HHCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEE
SKFDPVTGDAVLVVVNLNPFGPEDGTLWVDLPALGLDWHETFWVRDELTGEQYRWGQANY
ECCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCHHHEEEEECCCCCCCEECCCCCE
VRLDPPKAVAHILNLPQVREPVRTQLVYRP
EEECCHHHHHHHHCCHHHHHHHHHCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10542168 [H]